Pyrgilauda ruficollis (rufous-necked snowfinch): 121353331
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Entry
121353331 CDS
T07608
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pruf04040
]
121353331 (TRPC4)
Ion channels [BR:
pruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121353331 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121353331
NCBI-ProteinID:
XP_041323015
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MAQFYYKRSVNAPYRDRIPLRIVRAESELSHSEKAYLNAVEKGDYASVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPVLLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLSMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLVPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPGNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWLWRHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLSNLQTGKMSKDTASLSENEEN
SESEGNTKGKKKPFSLFDITTMIHPRSANIASEGHNVSNGSAMMVSESTQEKQKRVNFVT
DIKNFGLFHRRSKTNSVGQSTNKIYTVSEEVSRQQAEEQCEKTDELEEGELIMNCELNFR
NPGKKCMLDESQNTSESLDSQEGGSICPSETEKMELQNSEPATPQDQLDKALDISIDSDG
KQETIVQGDYVITSKRSVTVLIPLLEMHLQVLKTVEMILMEKKYLRLTQN
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaagtgtcaatgctccctacagagatcgtatccctctt
cgcattgtacgggcagaatccgaactgtcgcattcagagaaagcctacctgaatgccgtg
gagaaaggagattacgccagtgtaaagaaagctttggaggaggcagaaatttatttcaag
atcaatattaactgcattgatcccctgggaagaactgcactccttattgcaattgaaaat
gagaaccttgagctcattgagctgctcctaagttttaatgtgtatgtgggagatgctctg
ttgcatgccatacggaaggaggtggttggagccgtggagctgctgttaaatcacaagaaa
cccagtggagagaagcaggtaccaccagtgcttctggacaagcagttttcagaatttacg
ccggatatcacccctattattctggctgcccacaccaacaattatgaaatcataaagctc
cttgtgcagaaaggggtgtctgtgcccaggccacacgaggtgcgctgtaactgtgtcgaa
tgtgtctcaagctcagatgtggacagcctccgccactctcggtccagactcaatatctac
aaggctctggcgagcccatccttgattgctttgtccagtgaggatcctttccttactgct
tttcaactgagctgggagctgcaggaactgagtaaagtcgaaaatgagtttaagtcagag
tatgaggaactgtcacggcaatgcaagcaatttgcaaaagatctcctggatcagacacgg
agttccagggaattggaaattattcttaattacagagatgataatagcttgatagaagaa
caaagtggtaatgatcttgcaagattgaaactggcaattaagtaccgtcaaaaagagttt
gttgctcagcccaactgccagcagctgctcgcatcccgctggtacgacgagttccctgga
tggcggaggcgacactgggcagtgaagatgttgacatgtgttgtgataggactccttttc
ccagtcttctctgtgtgctacctgatagctcccaaaagcccattggggctgttcatcaga
aagccatttatcaaatttatctgccatacagcatcatacttgacttttctgttcctgctg
ttgctcgcctctcagcacatcgacaggtcagacctcagcatgcagggaccccctccaacc
atcgtcgagtggatgattttaccgtgggtcctgggttttatctggggtgaaattaaacag
atgtgggatggtggactacaggactacattcatgattggtggaacctcatggattttgta
atgaactccttgtacctggcaacaatctccttgaaaatcgttgcattttcaaagtatagt
gggttagttccacgggagagctgggacatgtggcatccaaccctggtggctgaggccctg
tttgcaatcgcaaacatctttagctccctgcgcttgatctcgttattcactgcaaattct
cacctgggacctctgcagatatctctaggaagaatgttgctggacattttgaagtttctc
ttcatatactgccttgtgctgctcgcttttgcaaatggattgaaccagctgtacttctac
tatgagacaaatgaacctggcaactgcaaaggaatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgaaacgctgcagtcattattctggtctatatttggactcatcaat
ctctatgtgaccaatgtgaaagcgaggcatgaattcactgaatttgttggggccaccatg
tttggtacctataatgtaatatctctggttgttctactcaacatgctaatagccatgatg
aataactcttaccaactcattgctgatcatgcagacattgagtggaagtttgctcgaaca
aaactctggatgagttactttgaagaaggaggaactctgcccactccttttaatgtcata
ccaagcccaaagtctttgtggtatctgatcaaatggttatggagacacctttgcaagaaa
aaaattagaagaaagcctgaaagttttggaacaatagggagacgtgcagctgacaatttg
aggagacatcatcaataccaggaagttatgagaaatctggttaaaaggtatgttgcagca
atgataagagatgccaaaactgaagaaggattgacagaagaaaattttaaggagttaaaa
caagatatttccagttttcgctttgaagtcctgggtttgttgaaaggaagcaagctgtct
aatttgcagactgggaagatgagcaaagacactgcctctctgtcagaaaatgaagaaaat
agtgagagtgaaggaaacacgaaaggaaagaagaaacccttcagcctttttgacataaca
acgatgattcacccacgatcagccaatattgcctctgaaggacataatgtaagcaatggc
tcagcaatgatggtgtcagagtccactcaggagaaacaaaagcgtgtgaattttgtaaca
gacataaaaaattttggattatttcacagacgatcaaaaacaaactctgtggggcagagt
acaaataaaatatacaccgtttctgaagaagtttcccgtcaacaggcagaagaacaatgt
gagaaaactgatgaactggaagagggagaattgatcatgaactgtgaattaaacttccga
aatcctggcaaaaaatgcatgttagatgaatcacaaaataccagtgagtctttggattca
caggaagggggcagtatttgtccttcagaaacagagaaaatggagttacagaactcagaa
cctgccactccacaagatcagctggacaaggcattggacattagcattgactctgatggg
aaacaggaaacaattgttcagggtgactatgtgataacaagcaagaggagtgtgactgtc
ctgataccattgttagaaatgcatttgcaagttttgaagactgtagaaatgattcttatg
gaaaagaaatatctgcggcttactcaaaattga
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