Pyrgilauda ruficollis (rufous-necked snowfinch): 121353680
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Entry
121353680 CDS
T07608
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121353680 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121353680 (DHX36)
03012 Translation factors [BR:
pruf03012
]
121353680 (DHX36)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121353680 (DHX36)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121353680 (DHX36)
Translation factors [BR:
pruf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121353680 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
Sir1
AAA_23
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121353680
NCBI-ProteinID:
XP_041323655
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MSYEQRRDWGRGRGRGRDRDRDRDRDRGGDGGAPSAASSAAGGPGGRGRHPGHLKGREIG
LWYARRQGQKNRDADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGP
APEQPAKVKPDAEKAPVRQLPTWEKTSLDLDVEFLCEKTEQDAELDEQLKEDLMKKRSDP
RYIEMQRFREKLPSYGMREELVKLINSHRVTVISGETGCGKTTQVTQFILDDHIERGLGS
TCRIVCTQPRRISAISVAERVAAERAEGCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIV
LQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFS
EYFDHCPMIHIPGFTFPVVEYLLEDVIEKLRYTPEKTDRRLHWRRGFMQGHMSRPEKEEK
EEIYRQQWPGYLRQLQDRYSASTISALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFL
PGWDNISTLHELLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAE
TSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLY
NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSKLMDPPSRDAVMLAINHLM
ELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPL
GKEKVADARRKELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLH
NMKGQFAEHLLAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRK
MVKVCTKTDGSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGG
DISIQKDKDQDTIAVDEWIVFQSPEKIANLVKKLRKELDDLLQEKIENPHPVDWNDVKCR
DTAVLTAIIDLITTQENEAVRNFAPRFQGERYS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgtgactggggccgcggccgcggccggggccgggaccgggac
agggaccgggaccgtgaccgtggcggcgatggcggcgccccatccgccgcctcctccgcg
gcgggcgggcccggcgggcggggacggcaccccgggcacctgaagggccgcgagatcggg
ctgtggtacgcccgcaggcagggccagaagaaccgggacgccgaccggcagcagagagct
gtggtgcgcatggacgagcgcagggaggagcagatcgtgcagctgctgaattctgtccag
actaaaaacgacaaagagcaagaagccatgtcctggtggtccggggatgaagaaggccct
gctccagagcagcctgccaaagtgaaaccagacgctgagaaagctcctgtgagacagcta
ccaacttgggaaaaaacatccctggatttggatgtggaatttctctgtgaaaaaactgag
caggatgctgaattagatgagcaacttaaagaagacttaatgaagaagagatctgatccc
agatatattgaaatgcagagattccgagagaagctcccctcgtacgggatgagagaggag
ctggtgaagctgatcaacagccaccgcgtgacggtgatcagcggcgagacgggctgcggg
aagaccacgcaggtgacgcagttcatcctggacgaccacatcgagcgcggcctgggctcc
acgtgcaggatcgtgtgcacccagccccgcaggatcagcgccatctccgtggctgagaga
gtggctgccgagagggcagagggctgtggcaatggcaggagcacggggtaccagatccgc
ctgcagagtcgcttgccaaggaagcaaggttcaattttgtactgtaccacgggaattgtg
ctgcagtggctccagtcagacaagcacttgtccagcatcagtcatgtagttcttgatgaa
atccatgaaagaaatcttcaatcagacgttttaatgagcattattaaagatcttctgaat
gttcgtctggatctgaaagtcatactgatgagtgctactttaaatgcagagaagttttct
gagtactttgaccattgcccaatgattcacatccctgggttcactttcccagtggtggaa
tatctgcttgaagatgtcattgagaagttgaggtacaccccggagaagacggaccgccgg
ctgcactggaggaggggcttcatgcagggccacatgagcaggccagagaaggaggagaag
gaggagatctacaggcagcagtggccaggctacctaaggcagctgcaggacaggtactca
gcaagtacaatcagtgccctggaaatgatggatgatgacaaggtggacctggaccttgtg
gcagcactgatcagacacattgtgctggaagaggaggatggtgcaattctggtgtttctg
ccaggctgggataacatcagcactttgcatgagctcttgatgtctcaagtcatgtttaag
tcagataggtttattatcatacctttgcattcactgatgcctactgttaaccagactcag
gtgttcaagaagaccccaccaggagtgaggaaaattgtgattgcaaccaacattgcagaa
accagcatcacaattgatgacgtcgtgttcgttatagatggggggaagataaaggagact
cactttgacacccagaacaacatcagcaccatggcagcagagtgggtcagcaaggccaat
gccaagcagaggaagggtcgggcaggaagagttcagccaggccactgctaccatctgtac
aatggactgcgtgccagccttctggatgattatcagttaccagagatcctgaggacaccc
ttggaagaactctgcctacaaatcaagatcctgaggcttggtggaattgcctatttcctg
agcaaactgatggaccccccatctcgtgatgctgtgatgttggccataaatcacctcatg
gagctgaacgctctggacaggcaggaggagctgactcccctgggtgtgcacctggcacgg
ctgcccgtggagccgcacatcgggaagatgatcctgtttggagccttgttctgctgcctg
gaccccgtgctgaccattgcagccagcctcagcttcaaggacccctttgtcatccccctg
ggcaaagagaaagtcgcagatgcaagaagaaaggagctgtcaaagaactcgaaaagtgac
catctgactgtggtgaatgccttcactggctgggaagaggctcggagttgtggtttcagg
aatgagaaggactattgctgggaatatttcctgtcctcaaacaccatgcagatgctgcat
aacatgaaagggcagtttgctgagcatctccttgcagctggatttgtgaatagcagaaac
cccaaggatcccaaatctaacaccaactcaggtaatgagaagctgctcaaagcagtcatc
tgtgctggcctctatcccaaagtggcaaagatccggcccagcttcagcaaaaagagaaaa
atggtgaaagtttgcaccaagacagatggatcagtcaatatccatcccaaatcagtgaac
gtggaggaaacagagttccattataactggctcgtgtaccacttgaagatgaggaccagc
agtatttacctgtatgattgtacagaggtgtctccgtactgcctcttgttctttggaggg
gatatatccattcagaaggataaggaccaggacaccattgctgtggatgagtggattgtt
ttccagtctccagaaaaaatagcaaacttggtcaagaaactgagaaaagaacttgatgat
ctcctacaagaaaaaatcgaaaacccccatcccgtggactggaatgacgttaagtgcagg
gacacagcagtgctgacagccattatagacttgatcaccacgcaggagaacgaggccgtc
aggaacttcgcgccgcgcttccagggcgagcgctacagctga
DBGET
integrated database retrieval system
