KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121353694
Entry
121353694         CDS       T07608                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03030  DNA replication
pruf03410  Base excision repair
pruf03420  Nucleotide excision repair
pruf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121353694 (RFC4)
   03410 Base excision repair
    121353694 (RFC4)
   03420 Nucleotide excision repair
    121353694 (RFC4)
   03430 Mismatch repair
    121353694 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pruf03032]
    121353694 (RFC4)
   03036 Chromosome and associated proteins [BR:pruf03036]
    121353694 (RFC4)
   03400 DNA repair and recombination proteins [BR:pruf03400]
    121353694 (RFC4)
DNA replication proteins [BR:pruf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    121353694 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    121353694 (RFC4)
Chromosome and associated proteins [BR:pruf03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    121353694 (RFC4)
DNA repair and recombination proteins [BR:pruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     121353694 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    121353694 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 AAA_16 AAA_11 AAA_30 AAA_22 AAA_24 Mg_chelatase DUF815 SLFN-g3_helicase AAA_14 RuvB_N AAA_19 AAA_5 TIP49_C AAA_28 AAA_23 DNAX_ATPase_lid ResIII AAA_7
Other DBs
NCBI-GeneID: 121353694
NCBI-ProteinID: XP_041323690
LinkDB
Position
Unknown
AA seq 362 aa
MQAFLKGPASISTKPVAAKEKNAAGSSGEGKRTKPIPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPDLFRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRSDGKMCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDSVQQQRLLDVSEKEHVKISNEAVSYLVKVSEGDLRKAI
TFLQSATRLMGGKEITEKIITEIAGVIPKETIDELLLGCQSGSFEKLEKLAKNLINEGFA
VAQLVNQLHDTIVESEDYSDKQKSAMVEKLAEVDKCLADGADEFLQLMSLCALVMQQLTQ
NI
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaagggcccggcctctatcagcaccaagcccgtcgctgccaaggaa
aagaacgcggctgggagcagcggggagggcaagaggaccaagcccatcccctgggtggag
aaatatcgtcccaaaaatgtggatgaagttgcattccaggatgaagttgtagctgtgctg
aagaagtccctggaaggtgctgatcttcccaatctgttgttctatggcccgcctggaact
ggaaagacttccactattttagcagctgctagagaactgtttgggcctgatttattccgg
cagagagtccttgagttaaatgcttctgatgagcgtgggatacaagtgattcgggaaaaa
gtgaaggcttttgctcagctaacggcgtctggaagccgttcagatggtaaaatgtgtcct
ccttttaaaattgtgatcctggatgaagcagactctatgacttcagcagcccaggcagcc
ttaagacgcacaatggaaaaagaatctaaaacaacacgtttctgtcttatttgtaactac
atcagcagaataattgaacctttaacatctcgatgctccaaattccgcttcaagcctttg
tctgacagtgtccaacagcagaggctgttggatgtttctgagaaggaacatgtgaaaatc
agtaatgaggcagtatcatacctggtgaaagtgtcagaaggggatttaagaaaagcaatt
acttttcttcaaagtgccactcgcctaatgggtgggaaggagatcacagagaagataatc
actgaaattgctggggtcatccctaaagaaacaattgatgaactgctattgggctgccag
agtggttcctttgagaaactggaaaaactggcaaagaatctcatcaatgaggggtttgct
gttgctcagcttgtaaaccagctgcatgacaccattgtggagagcgaagattacagcgac
aagcagaaatctgccatggttgagaaacttgcagaagtggacaaatgcctggcagatggt
gctgatgaattcctgcagctgatgagtctctgtgcccttgtgatgcagcagctcacacag
aacatctga

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