Pyrgilauda ruficollis (rufous-necked snowfinch): 121353915
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Entry
121353915 CDS
T07608
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121353915 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pruf03021
]
121353915 (POLR1B)
Enzymes [BR:
pruf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121353915 (POLR1B)
Transcription machinery [BR:
pruf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
121353915 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
121353915
NCBI-ProteinID:
XP_041324070
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLCGFSPQDLLQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFRKEL
FFLPLGFALRALVNFPDYQIFEELVKGREDDTFYANCITEMMRAVVDAGCLTQQNVLDYL
GKSFRVKLNLPEWYSNEQAADFILSNCICIHLTNRIEKFYLLCMMTQKLYAFAKGECMED
NPDSLMNHEVLTPGQLFLMFLKERLETWLQSVRFVLEKRAEKTDISLNTDSLVKAFSLAP
DFTKPFEYLLATGNLRSKTGLGMLQASGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVTDIPPLLCSLGVTPIDA
APSQPYSECYRVVLDGSMVGWVERELAPEIAQTLRRFKITQEKRFPARAEVVLIPMTGKP
SLYPGLFIFTNPCRMVRPVRNLSYGKNEWIGTLEQIFMNVATMESEVVPGVTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKAESIDLSLK
ASRAGDNLVFGIRPGDPNVGEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPSK
EVGIVDNVRLCSNDRGTGKFKKACITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGISYDATPFTFTEKKSALKYFGE
TLASAGYNFFGTEKMYSGISGVELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQ
PVKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMTSPVLEKL
SHSVTSSRRYSCSICSEVDAIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagggactatcaaacagcccctagggtatattccaatcatggtgaagtccaaa
ttgtgcaacctctgtggtttttctccacaagaccttttgcagcaccacgaggaggaagag
gaaatgggaggctactttataatcaatggcttagaaaaagtaatcaggatgctgattatg
cccagacgaaacttccctcttgcaatgacaagacacaagtggaaaaacagaggccctggt
ttcacagagtatggggtggtgatgcactgtgtcaaggatgagcacactgcaataaacatg
aaccttcactacttggaaaatggctgtgtcatggtgaatttcatttttcgcaaagagttg
ttcttcctccccttgggatttgctctgagggcattagttaatttcccggactaccagatt
tttgaagagctggtgaaaggaagggaagatgacaccttttatgcgaactgcattactgag
atgatgagagcggtggtggatgccggctgtttgacacagcaaaacgtcctggactacctg
ggaaagagcttcagagtgaaactcaacctgcctgagtggtacagcaatgaacaggctgca
gatttcattctgagcaattgcatctgtattcacctgaccaatagaattgaaaagttctac
ctgctctgtatgatgacccagaagctctatgcttttgccaaaggggaatgcatggaagat
aatccagacagtcttatgaatcatgaggtgcttaccccaggacaacttttccttatgttc
ctaaaggagaggcttgaaacctggctgcaatctgtaaggtttgttttggagaaaagagca
gaaaagacagatatcagcctaaatacagacagcctggtgaaggcattcagcctggcacca
gacttcaccaagccctttgagtatctgcttgcaactggtaacctgaggtctaaaacaggg
ctgggcatgttgcaggccagtggtctctgtgtggtgggggacaagctgaatttcatccgc
tacctctcccacttccgctgcatacacagaggggcagcgttttcccagatgagaaccacg
actgtccgcaagctgctgcccgaatcctggggcttcctgtgccctgtggacaccccggat
ggagagccctgtgggctgatgaaccacatgacagctctgtgtgaaattgtcactgagatg
gtgcccgtgacagacattccacctttgttatgttccctgggtgtgacccccattgatgca
gctccaagccagccttactccgagtgctacagagttgtgctggatggctccatggtgggc
tgggtagagcgggagctggctcccgagattgcacaaactctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatcccaatgacaggaaaaccc
agcctgtatcctgggctcttcattttcactaacccttgccggatggtgcggcctgtcaga
aacctgtcctatggaaagaatgaatggattggcaccctggaacagatcttcatgaacgtg
gccacgatggagtcagaggtggtgcctggagtgaccactcaccaggaactcttccctcac
agcatcttgagcgtggtggccaatctcattcccttctctgaccacaaccaaagtccacgg
aacatgtaccagtgccagatgggaaagcagaccatggggtttcctgtttacaactacaag
gatcgctcggataacaagctgtaccacctgcacaccccgcagagccctctggtgaggccc
agcatgtatgactattatgggatggacagctatcccgttggcaccaattccatcgtggct
gtcatctcctacagtggctatgacatggaagatgcaatgatcgtaaataaatcttcctgg
cagagaggatttgcgtatggaagtgttatcaaggcggagagcattgacctttcccttaaa
gccagcagggcaggagataatttagtatttggcatcaggcctggcgatccgaacgttgga
gagaagctggatgctgatggactgccttttgttgggtctatcctgcagcctggggacccc
ttctacagcttcatgaacctcaacacaggggagaccttcactgtgtactatccgagtaag
gaagtgggcattgtggacaacgttcggttgtgcagcaacgaccgtggcactgggaagttc
aagaaggcttgcattactgtgagggttccccgaaatcccactattggagacaaatttgcc
agccgtcacggacagaaaggtatcctgagccagctgtggcccgtcgaggacatgcccttc
acagagaacgggatggttccagacatcctcttcaaccctcacggctttccctcccgcatg
accattgggatgttaattgagagcatggcagggaagtcagcagccctgcatggcatctcc
tatgatgccactcccttcaccttcaccgagaagaagtctgctctgaaatacttcggtgag
actttagcgagcgcaggttacaacttctttggcacggagaagatgtacagcggcatcagc
ggggtggagctggaggcagagatcttcgtgggggtggtgtactaccagcgcctgcgccac
atggtctccgacaagttccaggtgaggaccacggggccccgagacgctgtcaccaaccag
cctgtcaagggcaggaatgtggaaggtgggatccgctttggcgagatggagcgggatgct
ctgctggcccacggcacgtccttcctgctgcaggaccgcctgttcaactgctccgacggc
tccgtagcctacgtgtgcacgagctgcggcagcatgacgtcccctgtgctggagaaactg
tcccactctgtgaccagcagcaggaggtattcctgctccatctgcagcgaggtggatgcc
atcgaggttgtccctgtgccccatgtcttccgctactttgtggctgagctggcagccatg
aacataaaaacaaagctcaatgtggagtag
DBGET
integrated database retrieval system
