Pyrgilauda ruficollis (rufous-necked snowfinch): 121354247
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Entry
121354247 CDS
T07608
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04137
Mitophagy - animal
pruf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121354247
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121354247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121354247
03009 Ribosome biogenesis [BR:
pruf03009
]
121354247
04131 Membrane trafficking [BR:
pruf04131
]
121354247
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121354247
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121354247
Ribosome biogenesis [BR:
pruf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121354247
Membrane trafficking [BR:
pruf04131
]
SNARE
SNARE associated proteins
Others
121354247
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121354247
Exosome [BR:
pruf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121354247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
121354247
NCBI-ProteinID:
XP_041324623
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgactctaaagccgatgacttatcaactgctattctgaagcagaag
aacaggcctaatcggttaattgttgatgaagccatcaatgaagacaacagtgttgtgtca
ctgtcccaggcaaagatggatgaactgcagctgttcagaggagacactgtcctgctcaaa
ggaaagaagaggagagaagcagtctgtattgttctgtcagatgatacctgctcagatgag
aagattcgcatgaatagagttgttcgcaacaacctgagagtgcgcctgggtgacgtgatc
agcatccagccttgcccagatgtgaaatacggcaaacgtatccacgtgctgccaattgat
gacacggtagaagggatcacagggaatctgtttgaggtctatctcaagccctacttcttg
gaagcttacagacctatcaggaaaggtgacatcttcttggtgcgtggagggatgcgtgcg
gtggagttcaaagtggtggagacagatccaagcccgtactgcatagtggctccggacaca
gtgatccattgtgagggagagcccatcaaacgggaggatgaagaggagtcgctgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcaaatcaaagaaatggtg
gaacttcccctccgacaccctgctctcttcaaggccataggggtgaagcctccacgtggg
atcctgctgtatggtcctcctggcactggtaaaacactgattgcccgagcggtggccaac
gaaacaggggctttcttcttcctgatcaatggtcctgagatcatgagcaagctggctggt
gagtctgagagcaacctgaggaaagcctttgaagaagcagagaagaatgctcctgccatc
atcttcattgatgagttggatgccattgctcctaagagagagaagacacacggggaggtg
gaacgtcgcatcgtgtctcagctgctgaccctcatggacgggctgaagcagagggcacat
gtgatcgtgatggcagccaccaacagacccaacagcatcgacccagcgctccggcgattc
ggtcgttttgacagagaggtagatattggtatccccgatgccaccgggcgcctggagatc
ctgcagatccacacaaaaaatatgaaactggctgatgatgtggatctggagcaggtggca
aacgagacccatggccatgttggtgctgacttggctgctctttgctcagaagctgctctt
caggcaatcagaaagaagatggatctcatagacctagaagatgaaaccattgatgctgaa
gtgatgaactctctggcagtgaccatggatgacttcaggtgggctctgagccagagcaac
ccttctgctcttcgggagactgtggtggaagtgccacaagttacctgggaagatattggt
ggcctagaagatgtaaagagggaactccaggagcttgtacagtatcctgtggagcaccca
gacaagttcctcaaatttggcatgaccccatcaaaaggagttctgttctatgggccacct
ggctgtggtaagacactgctggccaaagccattgccaacgaatgccaggcaaacttcatt
tccatcaaggggccggaattgctcaccatgtggtttggtgagtctgaagccaacgtgcgt
gagatcttcgacaaggctcgccaagcagccccatgtgtgctcttctttgatgagctggac
tccatcgccaaggcccgaggtgggaatatcggtgatggcggtggtgctgcagatcgtgtc
atcaaccagatcctgaccgagatggacggcatgtccaccaagaaaaacgtcttcatcatc
ggtgccaccaacaggccagacatcattgacccagccatcctgcgccccggccgcctggat
cagctcatctacatccccctgcccgacgagaagtccagggttgcaatccttaaagccaat
ctgaggaaatcaccagttgcaaaggatgttgacctggatttcctggcaaagatgaccaat
ggcttctcaggggctgacctgacagaaatttgccagcgtgcctgcaaactggccatccgc
gaatccatcgagagtgagatcaggcgagagcgtgagaggcaaaccaacccttctgccatg
gaggtggaggaggatgatccggttcccgagatccgcagggatcactttgaggaggccatg
cgttttgctcgccgctctgtcagtgacaacgacatcaggaaatatgagatgtttgcacag
accctacagcagagccgtggctttggcagcttcaggttcccatcaggcaaccagggcggc
gccggtccgagccaaggcacaggaggtggcagcgggggcaacgtgtacagcgaagacaat
gacgacgatctctacggttaa
DBGET
integrated database retrieval system
