Pyrgilauda ruficollis (rufous-necked snowfinch): 121354359
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Entry
121354359 CDS
T07608
Symbol
ACAN
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pruf00535
]
121354359 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
pruf00536
]
121354359 (ACAN)
04091 Lectins [BR:
pruf04091
]
121354359 (ACAN)
Proteoglycans [BR:
pruf00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
121354359 (ACAN)
Glycosaminoglycan binding proteins [BR:
pruf00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
121354359 (ACAN)
Lectins [BR:
pruf04091
]
C-Type lectins
Lecticans
121354359 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
CTD
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
121354359
NCBI-ProteinID:
XP_041324846
LinkDB
All DBs
Position
Unknown
AA seq
2089 aa
AA seq
DB search
MTTLLLVFVCLQVITAADSVELSDSSDGLEVKIPEQSPLRVILGSSLNIPCYFNIPEEQD
TSVMLTPRIKWSKLSNGTEVVLLVATGGKIRLNSEYREVISLPNYPAIPTDATLEIKALR
SNHTGIYRCEVMYGIEDRQDSIEVLVKGIVFHYRAISTRYTLNFEKAKQACIQNSAVIAT
PEQLQAAYEDGYEQCDAGWLADQTVRYPIHWPRERCYGDKDEFPGVRTYGVREPDETYDV
YCYAEQMQGKVFYATAPEKFTFQEAFDKCRSLGARLATTGELYLAWKDGMDMCSAGWLAD
RSVRYPISRARPNCGGNLVGVRTVYLYVNQTGYPHPDSRYDAICYSGDDIESLVPGQFID
EIGSELGSAFTVQTVTQTEVELPLSRNATEEEARGSIATLEPIEITPTATRLDEGFTALP
DLFTATLTAETAATEEENVTREDVTAVWTVPEEATTIDLGTAVTISAFGTAGTTETAEVS
SVEEVVGVTATPGLEPASVFTVEDQLVRVTAAPGAGHLPEQPISPTGVVFHYRAATSRYA
FSFVQAQKACLENSAVIATPQQLQAAYEAGFDQCDAGWLRDQTVRYPIVNPRNNCIGDKE
STPGVRSYGMRPASETYDVYCYIDRLKGDVFFATQPEQFTFPEAQRHCESQNATLASVGQ
LHAAWKQGLDRCYAGWLADGSLRYPIVSPRPACGGDAPGVRTVYQHHNQTGFPDPLSRHH
AFCFRALPPVEEEGVTPFFEDVLATQVIPGVEGVPSGEEVTAETEAATQPENQTAWGTEV
FPTDVSLLSVSPSAFPPATIVPEEASTNVSISEVSGEVTESGEHQVSGESSASGWIPGVP
DTSGEPISGGFELSGDHSGIGESGLPSVDLHVSGFPPGESGLPSGDLIGVSSGVVGYLPS
AEEETSVSISRIPEISGMPSEVESSGLPFGASGEISGTELVSGVSSGEESGVTSGFPTIS
LVDTTLVEVVTAATERQEEGKGSIGVSGEGDLSGFPSSGWDSSGGTQGLPSEGEPSGEPS
GVPELSGLSSGGSELSGLPSGLDGSGETSGTHEISGLVDLSGLSSGIEGSTEASGVTFVD
ATLEEVTTTSPVTRAEAKETLETSGLPSGDEDGSGMVSGSLDISGEPSGHVDFGGSVSGV
LEVSGYPSGVTDSSGDISGVDVTSGLLSGEESGLTSGFPTVSLVDTTLVEVVTQTSVAQE
VGEGPSGMIEISGFTSGDRGLSGEGSGAVETSGFPSGDLSEEPSGIAYISGDFSGATDLS
GQSSTVADISGEASGLPGITLVTSDFVEVVTRPTVSQELGGETATFPYSLGPSGEASGSG
ELSGETSALPESALETSTAYEISGETSAFPETGIETSTIHEISGEASAFPEFNTETSTIQ
EISGETSAFPEIFPETSTTSTGQEASGETSAFPESSTETSTIQEISGETSGFPEIRIETS
TSQDISGETSAFPEIRIETFTSQEARGEISGYPEISIETSTVHETSGETSAFPEISIETS
TVHEISGESSAFPEIRIETYTNQEARGETSAYPEISIETSTVHETSGETSAFPEISIETS
TVHEISGDVSSFPEISIETSTIHETSGEIPAFPEIRIETSTGEEARGETSTFPEISIETS
TVHDISGETSAFPEFSIETPTSQEARSETSAYPEIFIETSTVQEVSGETSAFPEIRVGTP
TSQEARGETFPEISLEASTVHETSGEASALPAANIKTAATSLASGEPFGTPEQKEIPDPT
SGAVTHSITGISGETSVPDIVISTRTPDVEPTEGLRNPEEAQLEMEPSPPVVSEQETETA
VAPDNPHLLATTTAALPQVSQEAIDALGPTTEDTDVCHSSPCLNGATCVDGIDSFKCFCL
PSYGGDLCEIDLENCEEGWTKFQGHCYRHFEERETWMDAETRCRQHQAHLSSIITPEEQE
FVNSHAQDYQWIGLSDRAVENDFRWSDGHSLQYENWRPNQPDNFFSAGEDCVVMIWHEKG
EWNDVPCNYHLPFTCKKGTVACGDPPAVENARTFGRKKERYEINSLVRYQCEQGYIQRHV
PTIRCQPNGQWEQPRISCLNPSSYQRRLYKRSPRSRSKASGSAVHRRAH
NT seq
6270 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactattagtgtttgtgtgtttgcaagtcatcaccgcagccgactctgtg
gagctctcagacagtagtgatggcctggaagtcaagatacctgagcagtctcccctgcgt
gttatcctgggaagctccctgaacatcccgtgttacttcaacatcccagaggagcaggac
accagcgtcatgctgaccccccggatcaagtggagcaagctctccaacgggaccgaggtt
gtcctgctggtggccacggggggcaagatccggctcaacagcgagtacagggaggtgatc
tccttgcccaactaccccgccatccccaccgacgccacgctggagatcaaggcgctgagg
tccaaccacaccgggatttatcgctgcgaagtgatgtacggcattgaggacagacaggac
tcaatagaggtcctagtgaaaggcatcgtattccactacagagcaatctccacaaggtac
accctgaactttgagaaggcaaagcaggcctgtatccagaacagtgctgtcattgctacc
cccgagcagctgcaggctgcatacgaggatgggtatgagcagtgtgatgctggctggctg
gctgatcagactgtcaggtaccccatccactggccccgggagcgctgctatggcgacaag
gatgaatttccaggagtgaggacctacggtgtccgtgagccagatgaaacctatgatgtt
tactgctatgcagagcaaatgcaaggcaaagtcttctatgccactgccccggagaagttc
accttccaggaagcttttgacaaatgccgcagcttgggagcgcgcctggccaccacgggg
gagctgtacctggcctggaaggacggcatggacatgtgcagcgcgggctggctggccgac
cgcagcgtgcgctaccccatctcccgagcacggcccaactgcgggggcaacctggtgggc
gtgaggacggtgtacctgtacgtcaaccagacggggtacccgcaccccgactcccgctac
gacgccatctgctacagcggggacgacattgagagcctggtcccagggcagttcatcgac
gagatagggagcgagctgggcagcgctttcactgtccagactgtcacccagacagaggtg
gagctgcccctgtcacgcaatgccacggaggaggaggcccgtggcagcatcgccaccctg
gagcccattgagatcacccccaccgccaccaggctggacgagggcttcactgccctgccc
gatctcttcaccgccactctcacagcagagacagctgccacagaggaggaaaatgtgacc
agggaggatgtcacagccgtgtggactgtacctgaagaggccaccaccatagatttaggc
actgccgtcaccatctcagcatttggcactgctggcaccaccgaaacagcagaggtgagc
tcggtggaagaggtcgtgggggtgactgccacaccaggactggagcctgcctcggtgttc
acagtggaagatcagcttgtgcgagtgacagctgcccccggtgccggtcaccttcccgag
cagcccatctcccccacaggtgtggtgtttcactaccgtgcagccaccagcagatacgcc
ttctcctttgtccaagcccagaaggcctgcctggagaacagcgctgtgatcgccaccccc
cagcagctccaggctgcctacgaggctggcttcgaccagtgtgatgctggctggctgcgg
gaccagacagtcaggtatcccattgtgaatccccgaaataactgcataggagacaaagag
agcactccaggcgtgcggtcatacggcatgcgcccggcctcggagacctacgacgtgtac
tgctacatcgacaggctcaagggcgatgtgttcttcgcaacgcagccggagcagttcacc
ttcccagaagcccagcggcactgcgagagccagaacgccacgctggcctctgttggccag
ctgcacgccgcctggaagcagggcctggaccgctgctacgcgggctggttggccgacggc
agcctgcgctaccccatcgtgagcccccgtcccgcctgcgggggggatgctccgggcgtc
aggaccgtgtaccagcaccacaaccagaccggcttccccgacccgctgtcccggcaccac
gccttctgcttcagagctctgcctcctgtggaggaggagggggtcaccccgttctttgaa
gatgtgctggcaacacaagtgatccctggagtggagggggtgccctcgggggaggaggtg
accgcggagacagaggctgccactcaacctgagaatcagacagcctggggtacagaggtc
tttccaactgatgtgtcactgctctcagtgagtccgtctgcttttcctccagctaccata
gtaccagaggaagccagtaccaatgtttccatcagcgaagtgtcaggggaggtgactgaa
tctggggagcatcaagtcagtggtgaatcttcagcatctgggtggattcctggagttcca
gatacaagcggagaaccaatttctggaggttttgaacttagtggagaccactcaggcatt
ggagagagtggattaccatcagtagacctgcatgtcagtggcttcccacctggagaaagt
gggctgccctcaggagacctgattggtgtgtcttctggcgttgttggttacctgccttct
gcggaggaggagacatcagtgtctatttcaaggataccagagattagtgggatgccatct
gaagtggaaagcagcgggctgccttttggagcgagcggagaaatctctggcaccgagcta
gtcagtggcgtgtcatctggagaggaaagtggagtcacctctggttttcctaccatctct
ctcgtggataccacactggtggaagttgtaacagcagcgacagaacggcaagaggaggga
aaagggtccatcggagtcagtggtgaaggagatctgtcagggttcccatcctctgggtgg
gacagcagtggtggaacccaaggcttgccctcagaaggtgagcccagcggggagccctct
ggggtacccgagctcagcgggctgtcctcgggagggtctgagcttagtggcttgccctca
ggactggatggcagtggagaaacatctggaacacatgagatcagtggtctggtggaccta
agtggcctttcctctggtattgagggaagcactgaggcctctggcgttaccttcgtagat
gccactttggaggaagtgacaacaacttcaccagttacaagagcagaagcaaaagagact
ttggaaaccagtggattgccttcaggtgatgaagatggatcaggcatggtatctgggagt
ttagacatcagtggtgagccttctgggcatgtagactttggtgggagtgtttctggagtg
ctggaggtgagcggatacccgagtggagtgacggacagcagcggagacatctctggggtt
gatgtcaccagtggtctgctctctggagaggaaagtggactcacctctggctttcccact
gtgtctcttgtggataccactttggtagaagttgtaacacagacatcagtggcacaagaa
gtgggagaaggaccatctgggatgatagaaatcagtggatttacttctggagatagagga
ctatctggagaagggtctggagctgtggagaccagtggttttccttcaggagacttgagt
gaagagccatctggaatcgcgtacatcagcggagacttttctggagccacagatctaagt
ggacagtcttcaacagtggctgatatcagtggggaggcctcagggcttcctggaatcact
ttagtcacttctgatttcgtagaagtggtgacaagaccaacagtatcacaggaactgggt
ggggaaactgccacgtttccctacagtttggggccaagtggtgaagcctctggatctggt
gaactaagtggggaaacatctgcactgccagaaagtgctctagaaacatcaacagcttat
gaaatcagtggtgaaacatctgcatttcctgaaactggtatagaaacatctacaattcat
gaaatcagtggggaggcatctgcatttcccgaatttaacacagaaacttcaacaattcaa
gaaatcagtggggaaacctctgcatttcctgaaattttcccagaaacatccacaacatcc
actggtcaagaagcaagtggggaaacctctgcatttcctgaaagcagcacagaaacatcc
acaatacaagaaatcagtggggaaacatctggatttcctgaaattagaatagaaacatcc
acaagtcaagacatcagtggggaaacgtctgcgtttcctgaaattagaatagaaacattc
acaagccaagaggccaggggtgaaatatctggctatcctgaaattagcatagaaacttcg
acagtccacgaaaccagtggagaaacatctgcctttcctgaaatcagcatagaaacttca
acagtgcatgaaattagtggagaaagttctgcatttcctgaaattagaatagaaacatac
acaaatcaagaagccaggggtgaaacatctgcctacccagaaattagcatagaaacttca
acggtccatgaaaccagtggggaaacttctgcgtttcctgaaatcagcatagaaacttcg
acggtccacgaaatcagtggggacgtgtcctcttttcctgaaattagcatagaaacttcg
acaatccatgaaaccagtggtgaaatacctgcatttcctgaaattagaatagaaacatcc
acaggtgaagaagctcgaggtgaaacatctacatttcctgagattagcatagaaacctct
acagtccatgatatcagtggggagacatctgcattccctgagttcagtatagaaacaccc
acaagtcaagaagccaggagtgaaacatctgcctatcctgaaattttcatagaaacatcc
acagttcaagaagtcagtggggaaacttctgcatttcctgaaattagagtaggaacaccc
acaagtcaagaagcccgcggagagacatttcctgagatcagcctagaagcatccacagtc
catgaaaccagtggggaagcatctgcattgcctgcggctaacatcaaaacagctgccaca
tctttggccagcggggagccctttggtactcctgagcagaaggagattcctgacccaaca
tctggagctgtgacacactctatcacaggcatttcaggggaaacctctgtcccagacatt
gtaattagtaccaggactccagatgttgaaccaacagagggactcaggaaccctgaagag
gctcagcttgaaatggagccttcccctcctgtggtgtcagaacaagagacagagacagct
gttgctccagacaatccccatctgctggccaccaccactgctgccctgccccaagtctca
caagaagcaattgacgcattaggacccactacagaagacaccgatgtgtgccactcaagc
ccctgtctgaacggagccacctgcgttgatggcatcgactctttcaaatgcttttgcctt
cccagctacggaggggacctgtgtgagatcgacttggaaaactgtgaggaaggctggacc
aagttccagggccactgctacaggcactttgaagagagggagacttggatggatgcagag
accaggtgccgacaacatcaagcccacctgagcagtatcatcaccccagaggaacaagaa
tttgtgaacagtcatgcacaggactaccagtggatcggcctcagtgacagagctgtggag
aacgacttccgctggtctgacgggcactccctgcaatacgagaactggcggcccaaccaa
cccgataacttcttttcggcgggtgaggactgcgttgtgatgatctggcatgagaaaggc
gaatggaatgacgttccctgcaactatcacctccctttcacctgcaagaaaggaacagtg
gcctgcggggacccccctgcagtggagaatgccaggaccttcggtcggaagaaggagcgc
tacgaaataaactccctggtgcggtaccagtgcgagcaaggctacatccagcggcacgtg
cccaccatccgctgccagcccaacgggcagtgggagcagccacggatatcctgcctaaac
ccctccagctaccagcgcaggctatacaagaggagccccaggagccggtcgaaagccagc
ggcagcgccgtgcacagacgcgcccattag
DBGET
integrated database retrieval system
