Pyrgilauda ruficollis (rufous-necked snowfinch): 121354389
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Entry
121354389 CDS
T07608
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121354389 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121354389 (MYO5C)
04131 Membrane trafficking [BR:
pruf04131
]
121354389 (MYO5C)
03029 Mitochondrial biogenesis [BR:
pruf03029
]
121354389 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pruf04812
]
121354389 (MYO5C)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121354389 (MYO5C)
mRNA cycle factors
P-body specific factors
121354389 (MYO5C)
Membrane trafficking [BR:
pruf04131
]
Others
Actin-binding proteins
Myosins
121354389 (MYO5C)
Mitochondrial biogenesis [BR:
pruf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121354389 (MYO5C)
Cytoskeleton proteins [BR:
pruf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121354389 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
121354389
NCBI-ProteinID:
XP_041324914
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDNFLHVQLEDGTELSYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDRNYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEYKHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKEDFQMDVFKMLAAILHLGNVEVAAVGDERSSISMEDKHLSIFCE
LLDLNCDKMTRWLCHRKIVTTSETVVKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDSPVSVSPF
SSAINIKSARPVLKSPNKQLRTTVGSKFRNSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQFQFGRTKIFFRAGQVAYLEKLRSDKLRQACILLQTRVRGWLQRRRFLAVR
RAALTVQQYFRGQRTVRQAITARNLKETWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYRKMREEQKAVVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQRKIEE
QSRENHGLLERLTNLASAHVNDVDTIQKLESEVEKLTAQKRTYEEKGKKYKEDSEQKILK
LENQNKELQEQKETLEIKLQEKTEEMKEKMDDLTQQLFNDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKILKEEKTQLQQQIQQEIIIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAHSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLNQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVAELENQKLDLENRLQEQTIKLKGKMEEMSNRLHYELERDRTQ
RRTTEAQNEVDIKEKESLKDTIQGIEGLSNGLMQDEVQDELQSKIKQVTTRLAVENRDLE
EKLDMKDRIIKKLEDQIKTLTKTIEKCKILLSLVPTVPKEYIGMMEYKKEDEERIIQNLI
LDLKPRGVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFE
MLSFWLSNTYYFLNCLKQYSGEEEFMKCNTPRQNKNCLKHFDLSEYRQILSDLAIQIYHQ
FIIVMENNIQHMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFY
STMCQNGLDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKD
KNLQSSNAKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDF
EKRVTPSFVRKVQAMLNNREDVPQLMLDTKHLFQVTFPFTPSPHALELIQVPSSFKLGFL
TRV
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagacaattttctccatgtg
caattagaagatggaactgagctgagttaccctgttgatccagctgctttgccaccacta
cgaaatcctgacatacttgttggtgaaaatgatctcactgcactcagttatctgcatgaa
ccagctgttctacacaatcttaaaattcgttttgtggagtctaagcttatctacacatat
agtgggataattctggttgcaataaacccctataagcagctgccaatatatggagatgcc
attatccatgcatatagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtccattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaaggtatactatgagatactttgccact
gtgagtaagtcaagcagcaatgcacatgtggaggataaagtactggcatccaatccaata
actgaggctgtgggcaatgcaaaaaccacacggaatgataacagcagtcgatttggaaaa
tacactgaaatcagttttgatcggaattaccaaatcattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtatttcagtcagaaaatgaaaggaactaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatataaacatcttaaattgggaagtgca
gaagaatttaactacacacgaatgggtggcagcactgtaatagaaggagttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactgggtctgaaggaggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttgggcaacgtggaagtagcagct
gttggagatgaaagatcatccatcagtatggaagataaacatctcagtatattctgtgag
cttctggatttaaactgtgacaaaatgacccggtggctgtgccaccgaaagattgtcacc
acctcagagaccgtggtaaagcccatgacaagggcccaggctgtcaacgccagggatgct
ctggccaagaagatctactcccatttatttgacttcattgtggaaagaattaaccaagct
ctgcagttccctggcaaacagcacactttcattggtgttttggatatttatggatttgaa
acgtttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacag
cagcaatttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttttatgacaaccagcctgtcattgaccttattgaggctaaa
atgggaattttagaacttctggatgaagaatgcttgttgcctcatggaaaagatgaaaac
tggcttcaaaagctgtataataattttgtcaataaaaacgcactctttgaaaagccaagg
atgtcaaacacttctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtgcatgaagtattgattgaaatcttgaaagag
agcaagtttcatctatgtgcaaatttttttcaagacagtccagtgtctgtctcacctttc
agttcagctataaacatcaaatctgccagacctgttctgaaatcacccaacaagcagctc
cggacgactgtgggcagtaagttccggaattctttgtctttgcttatggtgacactcaat
gcaaccactcctcattatgtgagatgcataaagccaaatgatgagaaattgccttttgag
tttgattccaagagagttgcccagcagctgcgagcatgtggtgttttggagactattcgg
attagtgcacagagctacccatccagatggacttacattgagtttttcagccgttacagc
attcttatgacacagcaggaactctccataaatgacaagaaacagatttgcaagattgtt
ttgcagaggctgatccaggatcataaccaatttcagtttgggagaacaaaaatttttttc
agagcgggacaggttgcttacttggagaagctgcgctcagacaagctgaggcaggcgtgc
atcctgctccagacgcgtgtgcggggctggctgcagcgcaggcggttcctggccgtgagg
agggcggcgctcaccgtgcagcagtacttccgcgggcagcgcaccgtcaggcaagctata
actgcaagaaatctgaaggagacatgggcagctataattattcagaaatactgtcggggt
tacctcgtccgtagactttgccagctcatccatgtggctgctgtaacaatacaagcttac
acgagaggatttctagcaagaaaaaagtatcgcaagatgcgggaagagcagaaggctgtg
gttctccagaaatatgcccgtgcatggctggccaggcgcaggttccagaacattcggcgc
tttgtgttgaatatccagctttcctacagagttcagcagctgcagagaaagatagaagaa
cagagtagagaaaatcatggtttgctggaacgattgaccaatctggcttcagctcatgtg
aacgatgtggatacaattcagaaacttgaatcagaagtcgaaaaattaactgctcagaag
agaacatatgaagagaaagggaaaaaatataaagaggacagtgagcagaaaatcttaaaa
cttgagaatcagaataaagaattacaagaacagaaggagaccttagaaataaaactccaa
gaaaaaactgaggaaatgaaagagaaaatggatgacctcacacagcaactcttcaatgat
gtacaaaaggaagaaaaccagcgaatgatacttgagaaaaattttcaaaaccagaagcag
gactatgaaaaggagattgaattgctcaagggagaaattaagattctgaaagaagaaaaa
actcagctacagcaacaaattcagcaagaaattatcattcaggatggcttgaaaatggaa
gtaggacagcttacaaaacaagcacagaaaatacccgagttgcaaaaggaaattgaactt
cttcagacacagaaattggatgttgaaaagcaggcccactcacagaagagagaattgagg
gaaaagatgtcagaagttacaaagcagcttctcgaaagttatgattttgaagatgtaaga
agcagactctctacagaggatctggagcacctaaatgaggatggagaactgtggtttgct
tacgagggcttgaaaaaagccacaagagtattggaaagccatttccagtctcagaaagaa
atatatgagaaggagattgaaggtttgaactttaaagttgaacatcttaatcaagatatt
aatcatctacaaaaattattccgagaggaaaatgacataaatgatggcattcggcttgaa
gttagcaggctaacttcagaaaatctggtaatcccagatcttaagcagcaagttgctgaa
cttgaaaatcaaaaattagatcttgaaaaccgtcttcaagagcagacaataaagttgaaa
ggaaaaatggaagagatgtcaaatcggctgcattatgagctggaacgggataggacacaa
agacgtactactgaggcccagaatgaagtggacataaaagaaaaagagagtctgaaggac
acaatccaaggaattgaggggctgagcaatggtttgatgcaagatgaagtccaggatgaa
ctacaaagcaagataaagcaagtgacaactcgacttgctgtggaaaacagggatcttgaa
gaaaagctagacatgaaagacagaataataaaaaaattagaagatcagatcaaaactctg
accaagaccattgaaaaatgtaagatattattatcccttgtgcccactgtgcccaaagag
tacattggaatgatggagtacaaaaaagaggatgaagaaaggatcattcagaatcttatc
ctcgatttgaagccacgcggagttgtagttaatatgatacctggccttccagctcacatc
ctgttcatgtgtgtgaggtatgcagactacctgaacgatgctgacatgctgaagtctttc
atgaatgtaaccattgatggcatcaaacaggttgttaaggaacattcagaagactttgag
atgttgtccttttggctttccaacacatattattttcttaactgtttgaagcagtacagt
ggagaagaggaattcatgaagtgtaacactccacgtcagaataagaactgtttgaagcat
tttgatctctcagaatacagacaaattctcagtgatttggccattcaaatatatcaccaa
ttcattattgtaatggagaacaacattcagcacatgattgtaccaggcatgctggaatat
gaaagtcttcaaggaatttctggcttgaaacctacggggttccgtaaacgttcttccagt
atagatgacacggatacctacactatgacctccatcttgcagcagctcagctatttttat
agcactatgtgtcagaatggcttggactctgagctcctaaagcaggcagtgaagcagctt
ttctttctcattggagctgtcaccctcaatagtctcttcctccgcaaggacatgtgctcc
tgtagaaaaggaatgcagataagatgtaatatcagctacttggaggaatggcttaaggac
aagaatcttcaaagcagcaacgccaaagaaactttggagcccctgtctcaagcagcctgg
ctccttcaggttaaaaagatcacagatgatgatgccaaggaaatatgtgaacactgcaca
tctctttctactgtgcagatagttaagatcctgaactcatacactccaatagatgacttt
gagaaaagagtgactccatcgtttgttcggaaggtccaggctatgctaaacaaccgtgag
gatgttccacagctgatgcttgataccaagcatctctttcaagtgacgtttcctttcacc
ccctctccacatgctttggaactgatacaagtccccagcagcttcaaacttggctttctc
acaagggtttaa
DBGET
integrated database retrieval system
