Pyrgilauda ruficollis (rufous-necked snowfinch): 121354399
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Entry
121354399 CDS
T07608
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121354399 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121354399 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
121354399 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
121354399
NCBI-ProteinID:
XP_041324927
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLGFQLVIPQPSIEHRKVPQRIEEQGDGAEDSGGGVPGLWGSWG
PWSACSRSCSGGVMEQTRPCLPAYYRERGYRRPGRHFPASERALPHPSAHHEDSLSAYPG
HVISAIRTSVPLHRNEEQPWAALRNSSQAGRAALRGSRHSQGPRHSARPDRRSRNKNPIG
PGKYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRSLFHQSPYSQAAAPSLQHGNLYQEPA
GPQAGHQVLGPSVYQSPSFPVSQSLFHGGDSSPQALQGQPQPQRAAAIVCIGAYKQYKLC
NTNMCPESSRNIREVQCASYNNKPFMGRFYEWEPFAEVKGSQKCELNCRAIGYRFYVRQA
ETVIDGTPCDPNGTAICVAGQCKSIGCDDYLGSDKVIDKCGICGGDNTACKVVSGVFKHT
LTNLGYHKIVEIPEGATKINITEMSKSNNYLALRSRSGRSIINGNWAIDRPGRYEGGGTM
FTYRRPNEISSTAGESFLADGPTNEVLDVYMIHQQPNPGIHYEYIIPGDNVISPQLLAHR
RPGEPLNGQLGMPESTSHEDEDLHRETDILTGQSAGTFPVIQPGRFPSHQPENQVPAMQP
PRQNREHNWKQVGKTECTTTCGKGSQYPIFHCVNRITHEEVPEGYCDSSTKPIPEEEACN
LFPCPAFWDIGEWSECSKTCGLGMQHRQILCRQIYANRTLTVQQYRCQHLEKPDTTSTCQ
LKICSEWQIRTEWTSCSVPCGVGQRTRDVKCVSNLGDIVDDEECNMKLRPNDIENCDMGP
CAKSWFLTEWSDRCSAECGDGIRTRSVVCMTNHVSSLPLEGCGNNRPSETTPCNNGPCAG
KVEWFAGGWTQCSTECGSGTQQREVICVRKTEGNFDVLNPYECSYLEKPPSQQSCYLKPC
GSKWFHTEWSTCSKSCEGGFRVREVRCLSDDMAASSQCDPQLKPEEKEPCNTQDCVPEID
ENCKDKYYNCNVVVQARLCVYTYYKTACCASCSRVANRQPGFLGRR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagacttctcagttccctagcagtgctgggattt
cagcttgtcatcccacagccttcaattgaacacagaaaggttccgcagaggatagaggag
caaggcgatggcgccgaggacagcggcggcggcgtgccgggcctgtggggcagctggggc
ccctggtccgcctgctcgcggagctgcagcggcggggtcatggagcagacgcggccctgc
ctgcccgcctattaccgggagcgcggctaccgccggcccggccgccacttcccggcctcg
gagcgcgctctgccccaccccagcgcccaccacgaggactcgctgtccgcctaccccggc
cacgtcatctcggccatccgcacctcggtgccgctgcacaggaacgaggagcagccgtgg
gccgcgctgcggaacagcagccaggccgggcgggcggcgctgaggggcagccggcactcg
cagggcccgcggcacagcgccaggccggacaggagaagcagaaacaaaaatcctattggt
ccaggaaagtatggctatggaaaagtgccatacattttacctttacaaactgatactggc
cagcagcctcagaagctgcggaggcagcgacagtcgtcgaggagcctgttccaccagagc
ccctacagccaggcagctgctccttccctgcagcacggcaacctctaccaagagccagct
gggcctcaggcaggacaccaagtcctggggccctctgtttatcagtccccttcgttccct
gtgtcccagagcctgttccacggcggtgactccagccctcaggccctgcagggccagccc
cagccccagagggctgcagccatcgtgtgcattggtgcctacaagcaatacaaactctgc
aacacaaatatgtgtcctgaaagcagcaggaatattagagaggtacagtgtgcatcatac
aataacaagccatttatgggtcgattttatgaatgggaaccttttgcagaagtgaagggg
agtcagaagtgtgagctgaactgccgggccatcggctaccgcttctacgtgcgccaggcg
gagacggtgatcgacggcaccccctgcgaccccaacgggacggccatctgtgtggcaggg
cagtgcaagagcattggctgtgacgactatctgggttctgacaaggtgattgacaagtgt
ggaatatgtggaggggacaacactgcttgcaaagttgtgtctggagttttcaaacacacg
ctaacaaatcttggctaccacaagatagtggaaattcctgaaggagctactaaaatcaac
attactgagatgtcaaagagcaacaactatttggccctgcggagccgctcgggacgctcc
atcatcaacggcaactgggccatcgatcgcccgggcaggtacgagggcggtggcaccatg
ttcacctacagacgccccaacgagatctccagcaccgcaggggagtccttcctggctgat
gggccaacaaatgaagtccttgatgtctatatgattcatcagcagcctaaccctggtata
cattatgaatatatcattccaggagacaatgtcattagtcctcagttgcttgctcacagg
aggccaggggagccactgaatggtcagttaggaatgccagaaagtacaagtcatgaggat
gaggatttgcatagagagacagacattctcactggacagtcagctggaacttttccagtt
attcagccaggaagatttccttctcatcagccagaaaaccaggtgcctgctatgcaacca
ccgagacaaaaccgggaacacaactggaaacaggttggaaaaactgagtgcactactaca
tgtgggaaaggatcacagtacccaattttccactgcgtcaacagaatcactcacgaggag
gtacccgagggttactgtgacagcagcaccaaacccattccagaagaggaggcctgcaac
ctcttcccatgccctgctttctgggatataggagagtggtctgagtgcagcaaaacctgc
gggctgggaatgcagcaccggcagatcctgtgccggcagatctacgccaaccgcacgctg
acagtgcagcagtaccgctgccagcacctggagaagcctgacaccaccagcacctgccag
ctcaagatctgcagcgagtggcagatcaggacagagtggacctcatgttcagtgccttgt
ggagtggggcagaggactcgagatgtgaagtgtgtcagcaaccttggggacattgttgat
gatgaggaatgtaacatgaagctgcggccaaatgacatcgagaactgcgacatgggcccc
tgtgccaaaagctggttccttacagaatggagtgacaggtgctccgcggagtgcggggac
gggatccgcacgcgctccgtggtctgcatgaccaaccacgtcagcagcttgcctctggaa
ggctgtggcaacaacagaccctcggaaacaacgccctgtaacaatgggccctgcgctggg
aaagtggagtggtttgctgggggctggacacagtgctctactgaatgtggtagtggaact
cagcagagagaagtaatttgtgttaggaaaactgagggtaattttgatgttttgaacccc
tatgaatgttcatatttggaaaaacctcccagccagcaatcctgctacctcaaaccatgt
ggatctaagtggtttcatacagaatggagcacatgttccaagtcctgtgaaggaggattt
cgggttcgggaggtgcggtgtctgtcggatgacatggcagccagttctcagtgtgatcca
cagctcaaacctgaagagaaggaaccatgtaatacgcaggattgtgtccctgaaatagat
gagaactgcaaggataaatactacaactgcaacgtggtggtccaggcgcggctctgtgtg
tacacctactacaaaacagcctgctgtgcctcctgcagccgcgtggcaaaccgacagcca
ggcttcctgggccgcagataa
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