Pyrgilauda ruficollis (rufous-necked snowfinch): 121354445
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Entry
121354445 CDS
T07608
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121354445 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121354445 (MYO5A)
04131 Membrane trafficking [BR:
pruf04131
]
121354445 (MYO5A)
03029 Mitochondrial biogenesis [BR:
pruf03029
]
121354445 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pruf04812
]
121354445 (MYO5A)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121354445 (MYO5A)
mRNA cycle factors
P-body specific factors
121354445 (MYO5A)
Membrane trafficking [BR:
pruf04131
]
Others
Actin-binding proteins
Myosins
121354445 (MYO5A)
Mitochondrial biogenesis [BR:
pruf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121354445 (MYO5A)
Cytoskeleton proteins [BR:
pruf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121354445 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HTH_17
AAA_16
Myosin_N
AAA_22
MYO6_lever
Motif
Other DBs
NCBI-GeneID:
121354445
NCBI-ProteinID:
XP_041325028
LinkDB
All DBs
Position
Unknown
AA seq
1879 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYSLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGVD
DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCTVPPKHEPLTIF
CDLMGVEYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN
KALHATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIRVLKSSKKFKLLPELFQDEEKVL
SPTSAAPSGRVPLSRMPVKPAKARPGQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVR
CIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDV
LGDRKQTCKNVLEKLIQDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRG
WLMRKKYMRMRKAAITIQRHVRGYQARCYAKFLRRTRAAITIQKFQRMYVVRKRYQCMRD
ATIALQALLRGYMVRNKYQMMLREHKSVVIQKHVRGWLARRRYRRTLQAIVYLQCCYRRM
MAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYST
ETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQSEKKSIEERADKYKHE
TEQLVSELKEQNSLLKTEKEELNRRIHDQAREITESMEKKLVEETKQLELDLNDERLRYQ
NLLNEFSRLEERYDDLKDEMNLMVSIPKPGHKRTDSTHSSNESEYTFSSEITEAEDLPLR
MEQEPSEKKAALDMSLFLKLQKRVSELEQEKQSLQDELDRKEEQALRAKAKEEERPPIRG
AELEYESLKRQELESENKKLKNELNELQKALTETRAPEVTAPGAPAYRVLLDQLTSVSEE
LEVRKEEVLILRSQLVSQKEAIQPKHTMTDATILLEDVQKMKDKGEIAQAYIGLKETNRQ
SPQDYHMLNEDGELWLAYEGLKQANRLLESQLQSQKKSHENELESLRGEIQSLKEENNRQ
QQLLAQNLQLPPEARIEASLQHEITRLTNENLFYEELYADDPKKYQLYRISLYKRMIDLM
EQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGM
LEYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTST
INGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEHCLTNFDLA
EYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADE
GTYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKDMCSWSKG
MQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTT
AQIVKVLNLYTPVNEFEERVLVSFIRTIQVRLRDRKDSPQLLMDAKHIFPVTFPFNPSSL
ALETIQIPASLGLGFISRV
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccgagctctacacgaagtatgccagggtttggatccctgatccagaggag
gtgtggaagtcagcagaactcctcaaagattataaacctggagataaagtccttcagctt
cgacttgaagagggcaaggacctagagtacagcctcgacccgaagacgaaggagctgccg
cccctgcggaaccccgacatcctggttggtgagaacgacctgacagcactcagctacctg
cacgagcccgccgtgctgcacaacctcaaagttcgcttcatagactccaaactcatctac
acctattgtggtattgttttagtggccataaatccttatgaacagctgcctatctatggc
gaagacatcatcaatgcctacagtggccagaacatgggggacatggatccacacatcttt
gcagtggctgaggaagcatacaagcagatggccagagacgagagaaaccagtccatcatt
gtcagtggggagtctggagctggaaagactgtctctgctaagtatgccatgaggtacttt
gccacggtcagtggatctgccagtgaagccaacgttgaggagaaggtcttggcctccaac
cccatcatggagtctattggaaatgccaaaaccaccaggaatgacaacagcagtcgcttt
ggcaaatacattgaaattggttttgataagaggtatcgaatcattggtgctaacatgaga
acttacctcttggaaaagtcaagagtggtgtttcaggcagaagaggagagaaattaccac
atcttttaccagctttgtgcctctgcagcattgcccgagtttaaaactctgcgattaggg
aatgcaaattactttcactatacgaagcaaggtggaagccctgtgattgatggtgttgat
gatgctaaggaaatggtgaacaccaggcaggcctgcactttgctagggattagtgattcc
taccagatgggaatttttcgaatccttgctggcatccttcacttgggcaacgtggagttt
gcatctcgggattctgacagctgcactgttcctcccaagcatgagcccctcaccatcttc
tgtgacctcatgggtgtggagtacgaggagatggcccactggctttgccataggaagctc
gccactgccactgaaacttacatcaagccaatttccaaacttcacgccatcaatgccaga
gatgcacttgccaaacatatctatgctaacctcttcaactggattgtagatcatgtgaac
aaagcccttcatgccactgtcaaacagcattctttcattggggtgttggacatctatgga
tttgaaacattcgaaatcaacagctttgaacagttctgtatcaactatgccaatgaaaag
ctgcagcagcagttcaatatgcacgtctttaagctggaacaagaagaatatatgaaggaa
caaataccatggaccttgattgatttctacgacaatcagccttgcatcaacctcatagag
gccaaaatgggagttctggatctgttggatgaggagtgcaagatgccaaaaggctcagat
gactcttgggcccaaaagctttacaatactcatttgaataaatgtgctctctttgaaaaa
ccacgtatgtcaaataaggcctttatcatcaagcactttgctgacaaggtggaatatcaa
tgtgaaggctttttggaaaagaataaagacacagtttatgaagaacaaattagggtccta
aaatcaagtaagaagtttaagctgctgccagagttattccaggatgaggagaaggtgctc
agccccacatcagcagccccttcagggcgcgtgcctctgtctcgaatgcctgtcaaacct
gccaaggccaggccagggcaagccagcaaggagcacaagaaaactgtgggacatcagttt
cggaactctcttcatctgctgatggaaaccctgaatgctacaactccacattatgtgcgc
tgcattaagccaaatgacttcaagtttccattcacgtttgatgaaaagcgggcagtgcag
cagctgagagcttgtggtgtcctggagaccatccggatcagcgctgctggcttcccctcc
aggtggacgtaccaagagttcttcagccgttaccgggttctgatgaagcagaaagatgtc
cttggtgaccgaaagcagacgtgtaaaaatgtcctggagaagctgattcaggacaaggat
aagtaccagtttggtaagacaaaaatatttttccgggctggtcaagtagcctacctggaa
aaaataagggcagataagttgagagctgcctgtatccgcatccaaaagacgatccggggc
tggctgatgaggaagaagtacatgcggatgaggaaggctgccatcaccatccagagacat
gtcagagggtaccaggcacgatgctatgccaagttcctgaggagaacacgagctgccatc
accattcagaagttccagcgcatgtacgtggtccgcaagagataccagtgcatgcgagat
gctactattgctctccaggctctcctgagaggttacatggtcagaaacaagtaccaaatg
atgctgcgggagcacaagtccgtggtcatccagaagcacgtgaggggctggctggcgcgg
cggcgctaccgccgcacgctgcaggccatcgtctacctgcagtgctgctaccgccgcatg
atggccaagagggagctcaagaagctgaagatagaggcccgctccgtggagcgctacaag
aagctccacattggcctggagaacaagatcatgcagctgcagaggaaaatcgatgagcag
aacaaagagtacaaatccctgctggagaagatgaacaacctggagatcacgtacagtacg
gagacggagaagctgcggagcgacgtggagaggcttcggatgagtgaggaggaggccaag
aacgccaccaaccgagtgctcagcctccaggaggagattgccaagctccgcaaggagctg
caccagacccagtcggagaagaagagcattgaggagcgggcagacaaatacaaacatgaa
actgagcagctggtttcagagctgaaagagcagaactcattactgaaaacagaaaaggag
gagctgaaccgccgcatccatgaccaggcgagggaaataacagagtcgatggagaagaag
ctggtggaggagacgaagcagctggagctggacctgaacgatgaacggttacggtaccag
aacctgctgaatgagttcagccgcctggaggagcgctacgatgacctcaaggatgaaatg
aacctgatggtgagcatccccaagcctgggcacaaaagaacggattcaactcacagtagc
aatgaatctgaatatactttcagctctgagatcacagaagcagaagacttaccactaagg
atggagcaggagcctagtgagaaaaaagcagcgctggacatgtctctgttcctcaagctg
cagaaacgggtttcagaactggagcaagaaaagcagtccctgcaggatgaactggacaga
aaggaagagcaggctctccgtgctaaagccaaggaggaagaaaggcctcccataagaggt
gcagagttggagtatgagtcgctcaagcgtcaagagcttgaatctgagaataaaaaactg
aagaacgagctgaatgagctgcagaaggccctgacagagacacgagctccagaggtgact
gctcctggtgccccagcatacagagtcctcctggaccagctgacctcggtcagcgaggag
cttgaagtacgcaaagaggaagttctcatcctgaggtctcagcttgtgagccagaaagag
gcgattcagcccaagcatacaatgacagatgccacaatcctcttggaggatgtacagaag
atgaaagacaaaggagaaatagcacaggcttatattggactgaaggaaacaaacaggcaa
tctccccaggactatcatatgctgaatgaggacggagaactttggctggcttatgaaggg
ttaaaacaagccaacaggctgctggagtctcagcttcagtcgcagaagaagagccacgag
aacgagctggaatcgctgcgaggtgagatccagagtctgaaggaggaaaacaaccggcag
cagcagctgctggcccagaacctgcagctgcctcccgaggcgcgcatcgaagccagcctg
cagcacgagatcacccggctcactaatgagaacttgttttatgaggagttgtatgcagat
gatcccaagaagtatcagttgtaccggatttccctttacaagaggatgattgatttaatg
gagcagctggaaaagcaggacaaaactgttcgcaagttaaagaagcagctgaaagtgttt
gctaagaagattggtgaactcgaagtgggccagatggagaacatatcacctggacaaatc
attgatgaacctattcgtccagttaacattccacggaaggaaaaggacttccaagggatg
ttggaatacaagaaggaggatgaacaaaaacttgtcaagaatcttattttagagctgaaa
ccacgtggggtagctgtcaacctgattccaggactcccagcatatattttgttcatgtgt
gtgcgccatgcagattaccttaatgatgaccagaaagtgcggtcgttgttgacttccact
atcaatggcatcaaaaaagtgttaaagaaaagaggagatgactttgagacagtgtccttc
tggctgtcgaacacctgccgatttttgcactgtttgaagcagtacagtggagaagagggg
tttatgaagcataatacacctcgtcaaaatgaacactgcctcactaattttgatttagct
gaatacagacaagtactgagtgacttggctattcagatctaccaacaacttgtccgagtg
ttggaaaatatcctgcaaccaatgattgtttcaggaatgctggagcacgagaccatccaa
ggcgtgtcaggggtgaaaccgacagggctgcggaagagaacgtccagcattgctgacgag
ggcacctacaccttggactccatcatccggcagctgaactccttccactcggtgatgtgc
cagcacggcatggacccagagctgatcaaacaggtggtcaagcagatgttctacatcatt
ggggccgtgacgctcaacaaccttctcctgcgcaaggacatgtgctcctggagcaaagga
atgcagataagatacaatgtgagtcaactggaggaatggctacgtgataaaaatttgatg
aatagtggggctaaggaaaccctggaacccctcatccaggctgcacagttgttgcaagta
aaaaagaaaacagatgaagatgcagaagccatatgttcaatgtgcaatgcactgaccact
gcccagattgtaaaagttctgaatttgtatactccagttaatgagtttgaagagagagtc
ttggtgtcatttatacgtacaatacaggtgcgtctgcgagacaggaaggactctcctcag
ttgctcatggatgccaaacacatcttccctgttactttcccctttaatccatcctctctg
gctttagaaaccattcagatcccagccagcttgggcctgggcttcatatcacgtgtgtga
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integrated database retrieval system
