Pyrgilauda ruficollis (rufous-necked snowfinch): 121354449
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Entry
121354449 CDS
T07608
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04350
TGF-beta signaling pathway
pruf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121354449 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121354449 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pruf04515
]
121354449 (NEO1)
Cell adhesion molecules [BR:
pruf04515
]
Immunoglobulin superfamily
DCC/UNC5 family
121354449 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
SusE
TMEM154
TM_ErbB1
DUF7092
EphA2_TM
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
121354449
NCBI-ProteinID:
XP_041325036
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MAARRARRLLGSLCIALLFAQTAPTGAAARSGSRSLLTESLVRTFTPFYFLVEPLDVLSV
RGASVIMNCSAQCETPPRIEWKKDGSFLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEG
YYQCVATVDSLGTIVSRTAKLTVAGLPRFTSQPEPTSVHRGGSAVLGCEVTAELAPLLRW
ERERQALAPGPRVLQLPGGALLLTNASDTDAGLYRCALDTGGTPKYSDEAELKVLPDAEE
PQRLVLLKAPSSLSRLPGQSAVFPCVAAAFPPPLIRWTRNGEELPTDGSGRFQLLPGGVL
EIRDVAEADAGTFTCIAESGNDTLEAQAELAVQVPPTFLKRPANIYAHESMDIVFECEVT
GKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQL
IILDLDVAIPTLPPTSLTSATNDHLAPATAGPLPSAPRDVVATLVSTRFIRLTWRPPASD
PQGDNLTYSIFYTKEGINRERVENTSRPGETQVMIQNLMPETVYVFRVVAQNRHGPGESS
ALLKVATQPEVQLPGPAPNIRAFSSSPTSVTVTWETPLSGNGDIQNYKLYYMEKGQHTEQ
DVDVAGLSHTVAGLKKFTEYSFRVVAYNKHGPGVSTHDVVVRTLSDVPSAPPQNLTLEVR
NSKSILLQWQPPPAGTQSGQITGYKIRYRKVSRKSDVTESVGGTQLSQLIEGLERGTEYS
FRVAAMTINGTGPATDWVSAETFESDLDESRVPEVPSSLHVRPLVTSIVVSWTPPENQDV
VVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAV
TRPHSDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKIT
DARFYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAH
GTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV
IEPVVGNRLTHQIQELTLDTPYFFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQAS
GSAGKGSRPMDLGPDYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVF
CTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMT
DTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPP
QPVISAHPIHSLDPPHHHFHSGSLASPTRSFLHHQLSPWPLGSAMSHSDRADSTESVRNT
PSTDTMPAASAVPSAELPEAEGPFLPAEEEPQGPPTAHVRPSHPLKSFAVPAVPNAGGPF
DPALPSTPLLTQQAPGHPLHAVKTASIGTLGRTRPPMPVVVPSAPEVQETTRMLEDSESS
YEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggagagcccggcgactcctcggctccctgtgcatcgcccttctcttcgcg
cagaccgcaccgaccggcgccgcggcgcggagcggctcccggagcctcctgacggaatca
ctggtgagaaccttcactcctttctacttcctggtggagcccctggacgtgctgtcggtg
cgcggggcgtcggtgatcatgaactgctcggctcagtgcgagacccctcccaggatcgag
tggaagaaggatggctctttcctcaacttggtgtcggacgaccgccgccagctgctgcca
gatggatctttattaattaacagtgtggtgcattccaagcataataaacctgatgaagga
tattatcagtgtgtggcaactgtggacagcctggggaccatcgtgagcaggacagcgaag
ctcaccgtggcaggtctgcccaggttcacgagccagccggagcccacctcagtgcaccgg
gggggcagcgccgtgctgggctgcgaggtgacggccgagctggcgccgctgctgcgctgg
gagcgcgagcgccaggcgctggccccggggccgcgcgtgctgcagctgcccgggggggcc
ctgctgctcaccaacgcctcggacaccgacgcggggctctaccgctgcgccctcgacacc
ggcggcacccccaagtacagcgacgaggccgagctcaaagtcctgccagatgcagaggag
ccgcagaggctggtgctgctgaaagcgccctcgtccctcagccgcctgcccgggcagagc
gccgtgttcccctgcgtggctgccgccttccctcctcccctcatcaggtggacaaggaac
ggggaggagcttcccactgatgggtctggccggttccagctgctgcccgggggggtgctg
gagatccgggacgtggccgaggccgacgccgggaccttcacctgcatcgctgagagcggc
aacgacaccctggaggctcaggcagagctggcagtccaagttccccccacgttcctgaag
cgccctgcgaacatctacgcccacgagtccatggacatcgtgtttgagtgcgaggtgacc
gggaagccaactccgaccgtcaagtgggtcaagaacggggacgtggtgatccccagtgac
tacttcaaaatcgtgaaagaacataacctgcaagttttggggctggtgaagtctgatgaa
ggattctatcagtgcattgctgaaaacgatgttggaaatgcacaggctggagcccagctg
ataatacttgaccttgatgttgccatcccaacattacctcccacttcactgaccagtgcc
actaatgaccatctagcaccagccacagcgggacccctgccctccgccccgcgggacgtc
gtggccaccctcgtgtccactcgcttcatccggctcacgtggcggccgccggcctcggac
ccgcagggagacaacctcacctactccatcttctacaccaaggagggcatcaacagggaa
cgtgtggaaaacacgagtcgtcctggagagacgcaggtgatgatccagaacctgatgcca
gagacagtttatgtgttccgggtcgtggcccagaacaggcatggccccggcgagagctcg
gcactgctcaaggtggcaacgcagcccgaggtccagctgcccggccccgctcccaacatc
cgcgccttctccagctcccccaccagcgtcactgtcacctgggagacaccgctctcgggc
aacggggacatccagaactacaaactctactacatggagaaaggacagcacacagagcag
gacgtggacgtggcggggctgtcgcacacggtggcggggctgaagaagttcaccgagtac
agcttccgcgtggtcgcctacaacaagcacggccccggcgtctccacccacgacgtcgtg
gtgcgcaccctgtccgacgtccccagtgctccaccacagaatctaacgctggaggttcgg
aattccaagagcatcctgctgcagtggcagccccctcctgccgggacccagagcgggcaa
atcacgggctacaaaatccgctaccggaaagtgtcacgcaagagcgacgtcaccgagagc
gtggggggcacccagctctcccagctcatcgaagggctggagcgaggcaccgagtacagc
ttccgcgtggccgccatgaccatcaacggcaccggccccgccaccgactgggtgtcagca
gagaccttcgagagcgacctggacgagagccgtgtgcccgaggtgcccagctccctgcac
gtgcggccgctggtcaccagcatcgtggtgagctggaccccgcccgagaaccaggacgtg
gtggtgaggggctacgccatcggctacggcatcggcagcccccacgcccagaccatcaag
gtggactacaagcagagatactacaccattgagaacctggatcccagctcccactatgtg
ataaccctgaaagccttcaacaacgtgggggaagggatccccctgtacgagagcgctgtg
acccggccccactccgacacttccgaggttgatttgtttgttattaatgctccatacact
ccagtgccagatccgtctcccatgatgcccccggtgggagttcaggcttccatcctgagc
catgacaccatcaggatcacttgggcagacaactccctgcccaagaaccagaagatcacg
gacgcgcggttctacaccgtccgctggaaaaccaacatccctgccaacaccaagtacaag
actgcaaatgccaccactctgagctacctggtgacggggctgaagccaaacaccctctac
gagttctcggtgatggtgaccaagggcaggagatccagcacctggagcatgacagcacat
gggacaacctttgaattagtgccaacctcgccccccaaggacgtgaccgtggtgagcaag
gagggcaagccccgcaccatcatcgtcaactggcagccgccctccgaggccaacggcaaa
atcacaggctacatcatctactacagcacggacgtcaacgccgagatccacgactgggtg
atcgagcccgtggtgggcaacaggctgacccaccagatccaggagctcaccctggacacc
ccctacttcttcaagatccaggcccgcaactccaagggcatggggcccatgtctgaggcc
gtgcagttccgcacccccaaagctgaatcctcagataaaatgcccaatgaccaagcctcg
ggatctgctgggaaggggagccgccccatggacctgggcccagactacaaacccccgctg
ggaggcagtaacagtccccatggcagccccacatcccccctggacagcaacatgctgctg
gtgatcatcgtgtccgtgggcgtcatcaccatcgtcatcgtcgtcatcgtcgccgtcttc
tgcacgcgccgcaccacgtcccaccagaaaaagaaacgagccgcctgcaaatccgtgaac
ggctcccacaagtacaagggcaactccaaagatgtcaaacctccagacctttggatccat
cacgagaggctggagctcaaacccattgataaatccccagatcccaatcccatcatgaca
gacaccccgatccctcgcaactcccaggacatcaccccggtggacaactccatggacagc
aatatccatcaaaggcggaattcctaccgaggacacgagtcagaggacagcatgtccacg
ctggcaggaaggaggggcatgaggcccaagatgatgatgccttttgattctcagccacct
cagcctgtgattagtgctcatcccatccattccctcgacccccctcaccaccatttccac
tccggcagcctcgcctctccaacccgcagcttcctgcaccaccagctcagcccgtggccc
ctgggctctgccatgtcccattcggacagggccgactccacagagtccgtccggaacacg
cccagcacggacacgatgccggcggcctcggccgtgcccagcgcggagctgcccgaggcc
gaggggccgttcctgcccgcggaggaggagccccagggcccccccacggcccacgtgcgc
ccctcgcaccccctcaagagcttcgccgtgcccgccgtgcccaacgccgggggccccttc
gaccctgccctgcccagcacccccctgctgacccagcaagcccctgggcaccccctgcac
gcggtgaagacggcgtccatcggcaccttgggcaggactcggccgcccatgcccgtggtg
gtgcccagcgcccccgaggtgcaggagaccacgcggatgctggaggactcggagagcagc
tacgagccggacgagctgaccaaagaaatggcgcacctggagggactcatgaaggacctg
aacgccatcaccacggcctga
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