KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121354522
Entry
121354522         CDS       T07608                                 
Symbol
PATL2
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 2
  KO
K24823  protein PAT1 homolog 2
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pruf03019]
    121354522 (PATL2)
Messenger RNA biogenesis [BR:pruf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121354522 (PATL2)
SSDB
Motif
Pfam: PAT1 IFT81_CH
Other DBs
NCBI-GeneID: 121354522
NCBI-ProteinID: XP_041325145
LinkDB
Position
Unknown
AA seq 775 aa
MLYGRRMPGRRGRPIKGAAGALWPRRGTRDDGGWVNGRRRRRQQHHHRGMAEGGESVIIE
DFLLVEDALLLEEMAEEDEELDLYNEMTFGLDRDSTEEDVPKLLVVPEISPEVAKALVEA
TGRAAEQLEELAEEEGGIELQMEQVNSQLEEEVEELGTEEQEEDQECFEEPSELGDPAVM
RAVRSKPTLESQDSAVLDSGIGTCWEEFGKEDTLAMDPMAWGSCPGSVPRHLMLEDKAIL
QVLERPPPSTNMALDFLGSPVQRGYGGSSRLKCSDLRLMSPKPFSQCFLQQAPLISPRSP
CSPQPFPPACRPSALFTPNQTAGYAPPTPFQPGSPTVGSPPQPLGVHFRPMSSSLDPAVF
FSPSATGPLNFSTPSHMTQLHPQHQRILMQRQGRQVQSVSPKKLWSRKVDPYAGLMTSKE
KDWVVKVEMMQLQSENIDDDYYYQTYYHRLERKQAEEELLGRRNKPPKLVTPFIQKVETY
DSVVRIAGSLGQVTVSTCYSPRRAIDAVHHALVEEEAAGTHRLRALHRIEKLFLQLLEVE
EVQQKISPGEKQPQRQEQKSQKVESIYQALKIRACSSEEEAEDEFLQLLCVRKGKKLVAR
LLPHLIGEQREKILLTITYHLPFLMKKDMLDESLPLLYSPLNEVVGEVTFSKLIELLQEL
THPLPESSELPLTMALKNQFGISLLYSLLSHGERLLSSHAPLKPCRGDFEAWTDTVYLMS
QELSRLPTASLAEPLFLPSNLVLLFCRYLDKQTVYHLATKMSECSPLPAEADMLC
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgctgtacggcaggcgcatgccggggcggcggggccggcccataaaaggggcggcgggg
gcactgtggccccgtagagggacccgggacgacggagggtgggtgaacgggaggaggagg
aggcggcagcagcaccaccaccgcgggatggcggagggcggcgagagcgttattatcgag
gattttctgctggtggaagatgcacttctgctggaagagatggctgaggaggatgaggag
ctcgacctgtacaacgagatgacttttgggttagaccgagactccacagaggaggatgtc
ccaaaactcctggtggtaccggagataagccctgaggtggccaaagcactggtagaggca
actggaagagcagctgagcagctggaggagctggccgaggaggaaggtgggatagagctg
cagatggagcaggttaactctcagctggaggaagaggtagaggagctggggactgaggaa
caggaggaagatcaggagtgctttgaggagcccagtgaactgggagacccagcagtgatg
agagctgtgcggagcaaacccacgctggagagccaggactcagcggtgctggacagcggg
attgggacttgctgggaagagtttggcaaggaggacacgctggcgatggatcccatggca
tggggctcctgccccggcagtgtcccacgccacctcatgctggaggataaagccatcctc
caggtcctggagagacctccaccatctaccaacatggctctcgacttccttggctctcct
gtgcagaggggctatgggggctcttcccggctcaagtgctctgacttaagacttatgtcc
cccaagcctttctcccagtgctttctccagcaggcacctctgatatctcctcgctccccg
tgctctcctcaacccttcccaccagcttgcagaccctctgcactcttcactcccaaccag
acagcagggtatgcgcctccaacccctttccagcctgggtcccccaccgtgggcagccca
ccacagcccctgggcgtgcacttcaggcccatgtcctcttctttggaccctgctgtcttc
ttcagcccctcagccacgggcccgctgaacttcagcacacccagccacatgacccagctg
cacccccagcaccagcgcatcctgatgcagcggcagggcaggcaggtgcagagtgtctcc
cccaagaagctgtggtctcggaaagtggacccttatgctgggctgatgacttccaaggag
aaggactgggttgtcaaggtggagatgatgcagctgcagagtgagaatatagatgatgac
tactactaccagacctactaccaccggctggagcgcaaacaggcggaggaggagctgctg
ggcaggcgcaacaagccccccaagctggtcacgccgttcatccaaaaagtggagacctat
gactctgtggtgcgcatcgcggggtcgctgggccaggttacagtgtccacctgctacagc
cctcgccgggccattgatgctgtgcaccatgccctcgtagaggaggaggctgcagggacc
caccggctgcgggcgctgcacaggattgagaagctcttcctgcagctgctggaagtagag
gaggtgcaacagaaaatctccccgggggagaaacagccccagaggcaggagcagaagagc
caaaaagtggagagtatctaccaagccttgaaaatcagggcttgcagcagtgaagaggag
gcagaagatgaattcctgcaactgctgtgtgtgcggaagggcaagaagctcgtggcccgg
ctgctgccccacctgattggagagcaaagggagaagatcctgctgacgatcacctaccac
ctgcccttcctcatgaagaaggacatgctggatgagtctctccccctgctctacagccca
ttgaatgaggtggtgggtgaggtgaccttcagcaaactcatcgagctcctgcaggagctc
acccatcctctacctgagtcttcggagctccccctcaccatggccttgaagaaccagttt
ggcatctccttgctctattccctactgagccatggagagaggctgctgtcctcacatgcg
ccactgaagccgtgcagaggggacttcgaggcatggacagacacggtgtacctgatgtcc
caggagctgtcacgcctgcctacagcctcgctggcagagcctctcttcttgcccagcaac
cttgtcttgctcttctgccgctacctggacaagcagactgtctaccacctggcaaccaag
atgtccgagtgctccccgctgcccgcggaggctgacatgctctgctga

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