Pyrgilauda ruficollis (rufous-necked snowfinch): 121354552
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Entry
121354552 CDS
T07608
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121354552
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
121354552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Ig_3
Ig_2
I-set
ig
CarboxypepD_reg
CarbopepD_reg_2
TSP1_spondin
TSP_1
TSP1_CFP_C
bMG3
Motif
Other DBs
NCBI-GeneID:
121354552
NCBI-ProteinID:
XP_041325191
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MVTMKGWILLLLWGATSVLGQRILKPALSRVQIGQRTFSPLVMLSLESTRSSSRRGDPTF
TYVRRSPLVQDSKRFLSPWSKWSECSAKCGQTGVQKRTRSCLAEPLWGVHCNEATEEGRL
CIGHVCSACNITCPMGHVNADCDTCMCEDATLHGKVSLEDGSPAADARVYLQAKKLKLLT
TADNRGMFMIPGVCPDGKNTLKIKKAKYATATVTVPESNRRNLAIQVQLHRSGKPYVFRS
PEDKARRVGQSVSLCCDARGSPAPDRYLWYHNGSLLDPSLYKYKNNLILKNLKREQSGEY
FCKASSAGGSAKSQVAKLAVIGRQEAACDSQPQSHLIRLPHDCFQKATNSFYYDVGKCPA
KTCVGKLDKGLRCKDNVSYCCGVSKMETRDISCDGYTLPTKVIVECGCKICTETKIMVRG
RATAADNGEPLRFGHIYMGNKRVSMTGYKGTFSIHVPADMERLVLTFVDRLQKFVNTTKV
LPFKENGGAVFHEIKLLRKKAPVTLESAETNVISLGEMEEDDPIAELEIPPNAFYRKNGE
VYSGKVKASVTFLDPRNISTAPVTQSDLNFVDEEGDVFPLRTYGMFSVDFTDEQGTESLN
AEKVKVHLDAAQVKMPEHVQEMKLWSLNPETGLWEEEGDFNLEKSTRHKREERTFLVGNM
EIKERRLFNLDVPESRRCYVKVRAYRSERFLQSEQIQGVVISIINMEPEPGFSSNPRAWG
RFDSVVTGPNGACVPAFCDEQNPEAYGAYILASMGGEELEAVPSAPKLNPVAIGVPQPYL
NKLNYRRTDHEDSNIKKTAFSINMAKPSPNSPEENNGPIYAYENLSECEEAPHSAAHFRF
YRIEGDRYDYNTVPFSEDDLMSWTDDYLAWWPKPMEFRACYIKVKINGPQEVNVRSRNMG
GTHPRTIGKLYGIRDVRSIRDPQQRDVSAACLEFKCSGMLFDQDRVDRTLVKVIPQGNCR
RVSVNSMLHEYLVNHLPMATNNDTSEYTMLAPLDPLGHNYGIYTVTDQDPRIAKEIALGR
CFDGTSDGTSRTMKSDVGVGLTFTCSERSTTEQSIFQSQRNLGQQSPRDPGRQSPRDPGR
QSPRDWSQQSPRDPGRQSPRDPGQQSPRDPVWQSPRDPGRQSPRDWSQQSPRDWSQQSPR
DSGQQSILVLPGQSPVYQRPPASRRNNQARIPMTGQRPTY
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccatgaaaggctggatcctcctcctcctctggggagccacgtctgttttagga
caaaggattctgaaaccagccctcagtagggtccagataggacagagaaccttcagcccg
ctggtaatgctcagcttggagagtacgaggagcagctctcgccggggagacccaaccttc
acctacgtcagacgcagtccgctggtgcaagattcaaaaaggtttttgtctccatggtcg
aaatggagcgagtgctcagcaaagtgtggccaaaccggggtgcagaagcgtaccagatcc
tgcctagctgagcccctctggggcgtgcactgtaacgaagcaactgaggaagggcggctc
tgcatcggacatgtttgctcagcctgcaacatcacctgccccatgggccatgtcaatgct
gactgtgacacttgcatgtgtgaggatgccaccctgcacgggaaggtgtcactggaggat
gggtcacctgctgctgatgcccgggtctacctgcaagccaagaaactcaagctgttgaca
acggccgataatagaggcatgtttatgatcccaggggtttgtcctgatgggaaaaacacc
cttaagataaagaaagccaaatatgcaacagcgactgtcactgtgcctgagagcaaccgg
agaaacctggcaatccaagtgcagctgcaccgatcaggcaaaccctatgttttcaggagc
cctgaggacaaagccaggagagtgggacagagcgtgtcactctgttgcgacgcccgaggg
agtccagctcctgaccgctacctctggtaccacaatggctcactgctggatccctccttg
tacaaatataaaaacaacctgattctgaagaacctgaagagagaacagtcaggagagtat
ttctgcaaggccagcagtgccggggggtcggcaaagtcccaagttgccaagctggctgtc
ataggaagacaagaggcagcctgtgactcccagccccaaagccacctcatccgacttcct
cacgattgcttccaaaaagcaacaaactccttctattacgacgtgggcaagtgcccagca
aagacctgtgtagggaagctggataagggacttcggtgtaaggacaatgtctcctactgc
tgtggggtatccaagatggaaaccagggacatctcctgcgatggctacacgctccccact
aaagtcattgtcgaatgtggttgcaaaatatgcaccgagaccaaaataatggttcgaggc
agagccacagcagcagataatggtgaaccactgagatttggccacatctacatggggaac
aagagagtgagtatgactggctacaagggaaccttctccatccacgtcccagcagatatg
gagagactggttctaactttcgtggatcggctgcagaagtttgtgaacacaacaaaagtt
ctgcccttcaaggaaaacggaggtgctgtatttcatgagatcaagctactgagaaagaaa
gcccctgttacgctggaatccgccgaaaccaatgtgatttctttgggggaaatggaagaa
gatgatccaattgctgaattagaaattcctcccaatgcattttatagaaaaaatggagag
gtctacagtggcaaagtgaaagccagtgtgacatttctggacccaagaaacatctccaca
gcccctgtgacacaaagcgacctgaactttgtagatgaggaaggagacgtatttccgctc
cgtacatacggtatgttttctgtggacttcacagatgaacagggcaccgagtccctcaat
gcagaaaaggtgaaggttcatttggatgctgctcaggtcaagatgccagagcatgtgcaa
gagatgaagctttggtccctgaacccagagacagggttatgggaggaagaaggggacttc
aacctcgagaaaagcacacggcacaaaagggaggagagaacctttttggttgggaatatg
gagatcaaagagaggcgtctttttaacctggatgtccctgagagcagacggtgctacgtc
aaagtccgagcttacagaagcgagcgatttctgcaaagcgagcagatccaaggggttgtg
atttctattataaacatggagccagaaccagggttctcctccaaccccagagcatggggc
cgttttgacagcgtagtcaccggtcccaacggcgcctgtgtgcccgccttctgtgatgag
caaaacccggaagcctacggagcttatatcttggcaagcatggggggtgaagagctcgaa
gctgtgccctctgctcccaaactcaaccctgttgctattggggtcccacagccatacctc
aacaagcttaactacaggaggacagaccacgaggactccaacatcaagaaaacagcattc
agcattaacatggccaagccaagccctaactccccagaagagaacaatggccctatttat
gcctatgaaaacctcagtgaatgtgaggaagctccacacagtgctgctcacttcaggttt
tacaggatagaaggagaccggtatgactacaacacggttcccttcagtgaagatgacctc
atgagctggaccgatgactacctggcatggtggcccaagcccatggaatttagagcctgc
tacattaaagtaaaaataaatggaccccaagaagtgaatgtaagatctcgtaacatgggt
gggacacacccacgcaccatcggcaagctctacggcatccgggatgtgcgcagcatccgt
gacccccagcagcgggatgtgtcagcagcctgcctggagttcaagtgcagtggaatgctc
ttcgaccaggaccgcgtggaccgcacgctcgtcaaagtgatcccacaaggcaactgccgt
cgagtgagcgtcaacagcatgctccacgagtacctggtgaaccacctccccatggccacc
aacaacgacaccagtgagtacacaatgctggcacctcttgacccgctgggacacaactac
ggcatctacacagtcactgatcaagacccaaggatcgccaaggaaatcgccctgggcagg
tgtttcgatggcacatctgatggcacgtccagaaccatgaagagcgatgttggcgttggg
ttgactttcacctgttcggagaggagcacgacagagcaaagcatcttccagtctcagagg
aacttgggccagcagtctccaagggacccaggccggcagtctccgagggacccgggccgg
cagtctccaagggactggagccagcagtctccgagggacccgggccgtcagtctccgagg
gacccgggccagcagtctccgagggacccagtctggcagtctccgagggacccgggccgg
cagtctccaagggactggagccagcagtctccgagggactggagccagcagtctccgagg
gactcgggccagcagtccatcctggttctgccagggcaaagccctgtgtaccagaggccg
ccggcaagccgccgtaacaaccaagccaggatcccaatgacaggtcaacgtcccacctac
tag
DBGET
integrated database retrieval system
