Pyrgilauda ruficollis (rufous-necked snowfinch): 121354835
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Entry
121354835 CDS
T07608
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121354835 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121354835 (HBS1L)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121354835 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
121354835
NCBI-ProteinID:
XP_041325738
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYG
CEGTDAAAADCFTPTHQLTEVDRARLNSCLDQMREVLAESIPEQTMVQAVLDTKFDVQKA
LDLVLSQGCKQNVKTKNKDAVILAKTTKGKTRDSQSARMESEIVPKIAKMTVSGKKQSMG
FEVPCVIAEENGHTNTPQKGLLPEDASVASGALEAVSKSTPSPQVVQVSEEQNMVPTPSK
KSSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYE
QESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMI
TGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVSWQQE
RFQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDS
FKPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITL
HDEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARILIFNIEIPITK
GFPVLLHYQTVSEPATITRLLSVLHKSTGEVIKKKPKFLAKGQNALIELQTQRPVALELY
KDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtgcgaggatataactacgacgaagactttgaagatgatgat
gtgtatggccagtcagtagaagatgattattgcatttctccttcaacagcagctcagttt
atttactccagacgagacaaaccagccacgtttgctgagccattagaagaagaatatggc
tgtgaaggtactgatgctgctgctgctgattgttttacacccactcatcagctgactgaa
gttgatagagctcgtcttaattcatgccttgatcaaatgagagaagttttggcagagtcc
ataccagaacaaacaatggtgcaagcagtactggatactaaatttgatgtacaaaaggct
ttggatcttgtgctttcacaaggctgtaagcaaaatgtgaagaccaagaataaggatgct
gtgattttagcaaagactacaaaaggaaaaacaagggattcccagtcagccagaatggaa
tctgaaattgtgccaaaaattgccaaaatgacagtgtctggaaagaaacagtctatggga
tttgaagttccatgcgtgattgctgaggaaaatggccacactaatacacctcagaaagga
ctgttacctgaagatgccagtgtagcttctggggcacttgaagctgtctcaaaatctact
ccttcaccccaagtagtacaggtttcagaagagcagaatatggtgcctactccatcaaaa
aagtcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaagga
ggaaagcaactgctgaatttggtggtaataggacatgttgatgcaggcaaaagtacttta
atgggtcatttgctctaccttttgggaaatgtgaacaaaagaacgatgcacaaatacgaa
caggaatctaaaaaggctggtaaagcttcatttgcctatgcatgggtcttggatgaaact
ggtgaagaaagagaaaggggagtgacaatggatgtgggtatgaccaaattcgagacacca
actaaagtaattacactgatggatgctccaggccacaaggacttcattccaaatatgatc
acaggagctgcacaggctgatgtggcaattttggttgtggatgccagcagaggagagttt
gaggcagggtttgagacgggtggacaaactcgagaacacggattattagtgcgctctctt
ggagtgacacagttggctgttgctgtcaataaaatggaccaggtcagttggcaacaggaa
agatttcaggaaattacaagtaagcttggccaatttcttaagcaagctggctttaaggaa
tcagatgtggcttatatcccaacaagtggccttggtggtgaaaatctagtcacaaggggt
cagtcaagtgacctcacccaatggtataaaggaaagtgtttgttggagcaaattgattct
ttcaagccaccacagagatcagtggataaaccatttagactgtgtgttgctgatgttttc
aaagaccaaggttcaggattttgtgtgactggtaaaatagaagcaggctatattcaggtt
ggagaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactg
cacgatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggc
atggatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggaacccattaaa
gtttgcactcggttcagagctcggattctcatctttaatattgagattccaatcactaaa
ggatttcctgtgcttttacactatcaaacagtaagtgaacctgctactattacaaggctg
ttgagtgtcctgcacaaaagtactggtgaagtgataaagaaaaaacctaagttcttggct
aaaggccagaatgctctaatagaactacaaactcaaagacctgttgctctagagttgtac
aaagattttaaagagctggggaggtttatgttacgctacagtggttccactattgctgca
ggagttgttacagagattaaggaatga
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