Pyrgilauda ruficollis (rufous-necked snowfinch): 121355124
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Entry
121355124 CDS
T07608
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03013
Nucleocytoplasmic transport
pruf05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121355124 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121355124 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121355124 (NUP98)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121355124 (NUP98)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121355124 (NUP98)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121355124 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
121355124
NCBI-ProteinID:
XP_041326255
LinkDB
All DBs
Position
Unknown
AA seq
1771 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSSSNTGSLFGSTQSKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGSLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTNTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGATTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLGSSNLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRQDGEREEEEEAHEVTRFYTNPIAKPIPQSLE
GSGHKSHSSVDDTIVALNMRAALRNGLEGSSEDASFQEDSLQEEWDKEIEPGLQQHPAGI
VLTRAGYYTIPTLEELARLTNDRKECIVTDFTIGRTGYGSIYFEGEVNLTNLNLDEIVHI
RRKEVIVYPDDEKKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMDYEGRLEA
VSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEDEEDRPLKVDTKKLKTTPVPPPGH
LPPQQMALNGKPAPPAQPPELEQLGRVVELDSDMADVTQEPAQEPLAEDALAEEQEAVPA
STHIASTQGINPYVLQIMKASLLADDDDLDLILDYPGKQPVRMDTSQEICSPRLPISKSQ
GQKRHTAAGLLQSKFASVLFQAPSAAVADAKGPRTLGSPPCAALWSAASPLASAFAVPAA
VPEVQVKTVGARRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPNWTLVNCGDQL
SGSSEVEDAQVEPVEYGFLPTPVAPKSLTESPFKVHVEKLSLEQWKMDRDKELYLTPLEI
KLKHSTVHMDEPCPLLAPNPGVSAIHDYADWARKASEDPTVAESEYRMILLTERFRLAQP
CQPKQCQLRRRTLEGVPATGRGWNRMSFRIPPSPRPRGAVRCAAEGVPAGDHRLALLLAQ
LAGSQPVRDLLTLQLVDWHRLHSDRFIQEERLRLFALLAGKPVWQLSERITVNVCSLLDW
KRCVAVHLWYLLPPTASISKALAMYELAFQNTSECEKYACCPLPPYLEDSGYVIEEDDNG
GRPLRDVCFHLLKLYSDRSYELDQLLDPRSVTSDPLDFRLSWHLWEVLRALNYSHLSQQS
WGVLNTSYAAQLESEGLWEWAVFVMLHEPDTHVREKAVRELLSRHCALAESAESWAKESF
LTQRLCVPPRWIHEAKAVRARMEGDKHKEALFLFKAGHWNQCHKLVVRHLASDAIINENY
KYLKGFLEDLAPPERSALIQDWELAGLVYLDYIRVNEMLDRIQQLDVSTYELERLHTKVT
SLCNRIEQLQCHTAKDRLAQSDMAKRVANVLRVVLSLQQGPEPGPEPAEPRVPLRLLAPH
IGRLPMPEDYALEELRGLTQAYLRELALAAH
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcgtttggaactccgtttggaggcagcaccggctttgggacaacttca
acttttgggcaaaatgctggctttggtaccaccagcggaggagccttcgggacctcggcc
ttcggctccagcagcaacaccggcagcctgttcgggagcacgcagagcaagccaggaggc
ttgtttgggtccaccaccttcaaccaaccagccacctcctccaccagcactggctttggc
tttgggacatccactgggacatcaaacagcctctttggaaccaccagcactggtggaagc
ctgttctcatcccagaataatgcctttgcacagaacaaaccagctggttttggaaacttt
ggtacgagcaccagcagtggagggctctttgggaccaccaacaccacttccaaccccttt
gggagcacatctggctctctgtttggcccaaccagctttactgctgctccaactggcaca
actattaaatttaatcctccaaccggcaccgacaccatggtgaaatctggcgtcagcacc
aacatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaagtccctc
gaggaactccgtttggaagactaccaggcgaataggaaagggcccacgaatcctgtagga
gcaggagcaactgctggcttgtttggctcttccactgccacgtccagcacggccacagga
ctttttggctcttccactaccaatacaggcttctcctacggacagaataaaactgctttt
ggaaccagtacgactggctttggcacgggcaccaccggggggctctttgggcagcagtcc
cagaccacgagtctgttcaacaaaccctttggccaggccaccaccacgcagaacaccggc
ttctccttcgggggcaccagcaccctgggccagcccaacaccaacaccatgggtctcttt
ggggtcacccagccctcacagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacgggaactggcctttttggacaagccaacacgggatttggtgtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggagccaccacgaccagcgct
ccttcgttcggtaccaccacgggcgggggcctcttcggttttggtgccaacaccgctgga
aatagcttgtttggaaataagcctgcgactgggactctgggcactgggcttggaacaggg
tttggaacagctctgggggcaggacagacgtccttgtttggaaacacccagcccaagctg
gggggaacgctgggaacgggcgcgttcggagcgccaggattcaacacatccacggctacc
ctgggcttcggggcccctcagcctgctgtagctctgacagaccccaatgcctctgcagcc
cagcaagctgtcctccagcagcacctcaacagcctgacctactcaccctttggggactcc
ccactcttcagaaaccccatgtcagacccgaagaagaaggaagagaggctgaagccaacc
aacccagcagcccagaaggccctgacgacccccacccactacaagctgaccccccgcccc
gccaccagagtgcggcccaaggccctgcagtccgcgggctcggccaagtcccagctcttc
gatgggctggatgatgacgagccctccctgtccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctcggcagcagcaacctgttctctcctgtgagccga
gagaatgaggacctggcgtcgccgtcggagtacccggagaatggggacaggttcttcctg
tcggtgcctcccgaggagaaccaccggcaggacggggagcgggaggaggaggaggaggcc
cacgaggtgaccaggttctacaccaaccctattgccaagcccatcccccagagcctggag
ggcagcgggcacaagtcccactcgagcgtggacgacaccatcgtggcgctgaacatgcgc
gcggcgctgcgcaacgggctggagggcagcagcgaggacgcctccttccaggaggattcc
ctgcaggaggagtgggacaaggagatcgagcctgggctccagcagcatcctgcagggatt
gtcctgacacgagctggctactacaccatcccgaccctggaggagctggcccggctgacc
aacgacaggaaagaatgtatcgtgacagacttcaccatcggccgcacgggttatggatca
atttacttcgaaggagaagtaaatctaacaaacttaaacctggatgagattgtacatatc
cggagaaaagaagttattgtttaccctgacgacgaaaaaaaacctcccattggggaaggg
ttaaataggcgagccgaggtgaccctggacggggtgtggcccacggacaagacgtcgcgc
tgcctgatcaagagccccgagcggctggccgagatggactacgagggccggctggaggcc
gtgtcccgcaagcagggcgcgcgcttcaaggagtaccgccccgagaccggctcctgggtc
ttcaaggtagcacacttttccaagtatggcttgcaagattccgacgaggatgaggaagat
cgtcctttaaaagtggacaccaagaagttaaagaccacacctgtgccacccccagggcac
ctgccaccccagcagatggccctgaacggcaaaccagcgcccccggctcagcccccggag
ctggagcagctgggcagggtggtggagctggacagtgacatggcagacgtcacccaggag
ccagcccaggagcccttggcagaggacgccctggccgaggagcaggaggcagtgccagcg
tccacgcacatcgcatccacccagggcatcaacccctacgtcctgcagatcatgaaagct
tccttgcttgctgatgacgacgacctggatttgatcctggattaccctgggaagcagcct
gtcaggatggacacttcccaagagatctgctccccaaggcttcccatttcaaaatcacaa
ggacagaaaagacacacagctgctgggctgctgcaatccaagtttgccagtgtccttttc
caagcaccgagtgctgctgtggcagatgccaagggccccaggactttgggcagtcccccc
tgtgccgcgctgtggtcggcggcgtcgccgctggcctcggcgttcgcggtgcccgcggcc
gtgcccgaggtgcaggtgaagacagtgggggcccgccggcagcgcgggctcgtccctctg
gagaggtccatcacctacggaaaagggaagctcctgatggacatggggctcttcatgggc
cgctccttccgcgttggctggggacccaactggacgctggtgaactgtggagatcagttg
agcggctcgagtgaagtggaagatgctcaggtggagcccgtggaatacggattcctgccg
acccccgtggctcccaaatcactcacagaatcccctttcaaagttcacgtggaaaagttg
agcttggaacagtggaagatggacagagacaaggagctgtatctcacccctctggagata
aagctgaagcacagcactgtccatatggatgagccctgtcccctcctggcccccaacccc
ggagtctctgccatccatgactatgctgactgggccaggaaagcatctgaggatcccact
gtggcagagagtgagtatagaatgatccttctcacagaacggtttaggctggcacagccc
tgccagcccaagcagtgccagctgaggaggaggacattggaaggtgtccctgccacgggc
aggggctggaataggatgagttttaggatccctcccagccccaggcctcgtggggccgta
aggtgtgcagctgagggtgtccctgcaggtgaccaccggctggcgctgctgctggcgcag
ctggccgggagccagcccgtgcgggacctgctgacgctgcagctggtggactggcaccgc
ctgcacagcgaccgcttcatccaggaggagcgcctgcgcctcttcgccctgctggcgggc
aagccggtgtggcagctctccgagaggatcactgtcaacgtgtgctcgctgctggactgg
aagcgctgcgtggccgtgcacctctggtacctgctgccccccacggcctccatctccaag
gctctggccatgtacgagttggcctttcagaacacctcagagtgtgaaaaatacgcctgc
tgtcctctgcctccttacctggaagattctgggtatgtcattgaggaagatgacaacgga
ggaaggcccctgagagatgtctgcttccatttgttaaagctctacagtgacaggtcctac
gagcttgaccagctgctggatcccaggagtgtcacctctgacccgctggatttccgcctc
agctggcacctgtgggaggtgctgcgggccctgaactactcccacctgtcccagcagagc
tggggggtgctgaacaccagttatgctgcccagctggagagcgaggggctgtgggaatgg
gccgtgttcgtgatgctgcacgagcctgacacgcacgtgcgggagaaggccgtgcgggag
ctgctgagccggcactgcgccctcgccgagagcgccgagtcctgggccaaggagagcttc
ctgacacagcgcctctgcgtgcccccgcgctggattcacgaggccaaggccgttcgggcc
aggatggagggtgacaagcacaaagaggcccttttcctcttcaaggctgggcactggaac
cagtgccacaagctggttgtcaggcacttggcctcagatgcaattatcaacgagaactac
aagtacctgaaagggttcctggaggacctggcacccccggagcgcagcgcgctcatccag
gactgggagctggcagggctggtctacctcgactacatccgtgtcaacgagatgctggac
aggattcagcagctggatgtttccacctacgagctggagcggttacacaccaaagtgacg
tccctgtgcaacaggatagagcagctgcagtgccacacggccaaggaccgcctggctcag
tcagacatggcgaagcgcgtggccaacgtgctgcgggtggtgctgagcctgcagcagggc
cccgagccgggccccgagcccgcggagccgcgcgtgcccctgcggctgctggccccgcac
atcggccgcctgcccatgcccgaggactacgcgctggaggagctgcgcggcctcacccag
gcctacctgcgcgagctggccctggccgcgcactga
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