Pyrgilauda ruficollis (rufous-necked snowfinch): 121355319
Help
Entry
121355319 CDS
T07608
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf02010
ABC transporters
pruf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121355319 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121355319 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pruf02000
]
121355319 (ABCA1)
Transporters [BR:
pruf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121355319 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
121355319
NCBI-ProteinID:
XP_041326581
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLIDNETFSDFLHHNMSMPSSAVEELLDAGVNL
QQVIVSGYRMRLRDLCNSSASSEFLMIQNQTTAMDSEAFICTLSKEKLHAAEQAFRANLN
PLKPLQRQLSFNSSLWDLSETVETLRESIGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAIRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNSPEDFETENG
SVYTWMDAFNETDRAIQTISRFMECVNLDKLEPVPTEVQLVNKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHSHPDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDKQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQMK
GWKLTQQQFMALLWKRMLIAKRSWKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPEDAGTHNLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTAS
VPESVLDIFVKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQNL
TGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAVKRVKK
ILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQQ
GENPSAYGITALNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLAL
LLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSN
IQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFG
HAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDLSLHKNQTLVDIAILNSFLQDEKVKESCV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggactcagctgggattgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcggcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggtattgttggaaatttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggacacg
agtataaaggatgtccagaaggtcctgggaaaactacgcaagttgggaaattcctctggc
ttagacttgaaacttcgggatttcctgattgacaatgagacattctctgacttcctccat
cataatatgtctatgccatcatctgcagtagaggagctactggatgcaggggtcaacctg
cagcaggtcattgtgtctggttatcgaatgcgactgagagatctctgcaatagctcagca
tcatctgaatttctaatgatccaaaatcagactacagccatggactctgaagccttcatt
tgcaccttgtcaaaggaaaaactccatgcagccgagcaagccttccgtgctaacctgaat
cctttgaagcctcttcagagacaactttctttcaattcctccttgtgggatctgtcagaa
acggtggaaactttgagagagagcattgggaagcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaagtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacgcagatctaccaggctgtgtcacgcatcgtgtgtggccatcctgaaggtggaggg
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gaactaatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaaa
cccttgctgattgggaagatcttgtacactccagatacgccagctataaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacactgctgaaaggcaaagccctctgggacctgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacagtccagaggactttgagacagaaaatggt
tctgtgtacacctggatggacgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacctggacaaactggagcctgtgcccacagaagtccagctc
gttaacaagtccttggaacttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatagctcctgacagcacagaccttccccagcatgtgaaatacaagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtg
gtagaacaggccatcatcagggttcagacaggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccatgttacgtggatgacatatttctgcgtgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaagggtatt
gtgtatgagaaggaagcccggctgaaagaaacaatgaggattatgggacttgacaatggc
atcctttggttaagctggttcattagcagccttgtccctctcctgatgagtgcaggactg
ctggtgctgatcttgaagatggggaatctgctgccttacagcgatcctagtgtggtgttc
attttcctctcaatcttcggcgttgtgaccatcctccagtgcttcctcatcagcactgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacactgtacctg
ccctatgtgctgtgtgttgcctggcaggaccacatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagcctttggttttggttgtgagtactttgcactgtttgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcagctgtcatgatgctgtttgataccttcctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcatattggtttggggaggaaccacaggacaggcagcactcccatcctgac
cagaaagggtcttcagaagtctgcaaggaagaagagccagtgcacctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctc
acacttaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccattttgactggcttgttccccccaacttcaggaacagccttcatc
ctgggcaaagatatccgctctgagcttagcactatcaggcagaacctgggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctacgctcgg
ctcaaagggctgccggaaaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcaagctctctggtggcatgcagaggaag
ctctctgttgccttagcttttgtcggtggctccaaggttgtcattctggatgagcctaca
gctggggtggatccctattctcgcagaggaatatgggaactgcttctaaagtatcggcaa
ggtcgcaccatcattctctccacgcaccacatggatgaggctgacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggctattatttgaccctggtcaaaaaggatgtagattcctctctgagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacattgacaatagatgtg
tccgcaatttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttggcatttccagctatggcatctcg
gaaactactctggaggagatcttcctgaaagtggctgatgatagcggtgtggatgcagaa
acctcagatggcacgttgccagccagaaggaacagacgtgtgtttggagacaaacagagc
tgccttcgtccgtttacagaagatgatgcatttgatcctaatgactcagacatagatcca
gaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccaaatgaag
ggctggaagctcacccagcagcagttcatggctctgttgtggaagaggatgctcattgcc
aagagaagttggaagggcttttttgcccagattgtgctgccagctgtctttgtgtgtatt
gctctcatgttcagcctgattgttcctccttttgggaagtatcccagcctggaactacaa
ccctggatgtacgatgagcagtacacttttattagcaacgatgctccagaagatgcaggc
actcacaaccttttggatgcccttcttgataagccggggtttgggacacgctgtatgcag
ggacattccatcccggacactccttgcactgtggggcagaaggaatggaccactgcttca
gtcccagagtcagtgctggacatcttcgtgaaaggcaactggagcatggagaatccttcc
ccgtcttgcgagtgtagcagtgagaagatcaagaagatgctgcctgtgtgcccccctggt
gcagggggcctgccacccccacagcgtgagcaagacacagctgacatcctccagaatctg
acaggccgcaatatatcagactacctagtgaagacctatgcgcagatcattgggaaaagc
ttaaagaataaaatctgggtgaatgagttcaggtatggtggcttttccttgggagccagc
agttcccttgtgcttcctccaagtcatgaagtcactgatgccgttaaacgggtgaagaaa
attttggagctggcacaggggagttctggggatcgatttctcaacagtttatcaagtttc
atgaaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctggcat
gccattgcatccttcctgaatgtgatcaacaatgccatccttcgggccaacctccagcag
ggtgaaaatcccagtgcttatgggatcactgccttaaatcacccactcaacctcaccaag
caacagctctctgaagtagctctgatgaccacctctgtggatgtccttgtgtccatctgt
gtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaacgt
gtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgttatctactggctg
gccaactttgtgtgggatatgtgcaactacattgttccggccacactagttgtcatcatc
ttcatctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggctctc
ctcctgtttctctatgggtggtccatcacccctctcatgtatccggcctcctttgtgttc
aaaatccctagcacggcatatgttgtgctgaccagtgtgaatctcttcattggcatcaat
ggcagtgtggccacctttgtcctggagctcttcaccaacaataaactgaaggacatcaat
gacatcctgaagtctgtcttcctcatcttccctcacttctgcctgggccgaggactcatt
gacatggtgaaaaaccaggctatggctgatgctctggagagatttggagagaatcggttt
gtgtcccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagaaggt
gtggtgttttttctcatcacagtgctcatccagtacaggttcttcatcaaacccaggcct
gtgtatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagaggcag
aggataattagtggaggaggacagagtgacattttggaaatcaaggagctaaccaagatt
tacagaatgaagagaaagccagcagttgataggatctgtgttggaatccctcctggagag
tgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgctaact
ggtgatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtccaac
atccaggaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgaactg
ctgacagggcgagagcacttggagttctttgcactcttgagaggtgttccagagaaagaa
gtctgcaaggttggtgagtgggcaattcggaaactgggccttgtgaaatatggagaaaaa
tacgctgggaattacagtggagggaacagacgcaagctttccacagccattgccctcatt
ggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagcacgt
cgcttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcagtggtgctcaca
tctcacagtatggaagaatgtgaagccctctgcactcgaatggcaataatggtcaatggg
cgattcaggtgtctgggcagtgtccagcacctaaaaaacaggtttggagatggttacacc
atagtggtgagaattgcaggggcaaacccagatctgaaacctgttgaggagttctttggg
catgccttccctggaagtgtcctaaaggaaaaacatcggaatatgctgcagtaccaactt
ccctcttcaccatcctccctggccaaaatattcagtattctgtcccagaacaagaagaga
ctccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaatttt
gctaaggaccaaagtgatgacgaccatactaaggacctgtcattgcacaaaaaccagaca
ctggtagacattgcaatccttaactcctttctgcaagatgagaaggtaaaagaaagttgt
gtgtga
DBGET
integrated database retrieval system
