Pyrgilauda ruficollis (rufous-necked snowfinch): 121355456
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Entry
121355456 CDS
T07608
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pruf00535
]
121355456
04091 Lectins [BR:
pruf04091
]
121355456
Proteoglycans [BR:
pruf00535
]
Cell surface proteoglycans
Others
121355456
Lectins [BR:
pruf04091
]
C-Type lectins
Others
121355456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Cadherin_C_2
TMEM154
YqbF
TMEM52
Motif
Other DBs
NCBI-GeneID:
121355456
NCBI-ProteinID:
XP_041326833
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MAEASSQTSLQLQFRTSKPQGLLLLAAGKTDYCLMELRSGYVQLRINFGVGERVLHSQKR
SQLNDLAWHLVELHHEHDNVTLVIDKHDRTSAKMPGIFYELNIDYGVYIGGTGKLDVPYL
VGALPSFRGCIDGVSFNQFDILRPLRPSPGFRNIHEVSVGCSDEFFAGEEEPISFFSSRS
YISFPSRNVDNERIFEYALHTSAARGLLLYHPGQAGDFIAMEMEDGLIKAYVGKPESRIH
LSSRRSVNDSCWHYIKLKFTAEYLQLTLDEETVRKSLPPQSKLPLLKGSFFVGGVDDSIR
SEVMKLISVSGKYARGGSFKGCLRNLKANSEKKSLKNVLVTKDISAGCEIPSSFKTNLSL
QMAEKNSSVKAAPVFAISHESSISLGKEDKSHLLILSNLIVLEGEQASLESKHIKVNLDF
QKLGVNQSQILFDIKEPPSHGCLKLNVEPLQEVNTFTMQDVWQGKILYVHDGSEDIYDYF
NFSISASSKKIVSPYLRGNEQHMFSITITPVNDAPEIILPGGNLLLLLENSKKRLTNDLI
KVVDEDTDSVGLTLSVLGNLNADAGFLENSRHPGKAIITFSNEDLDKGTVFFVHTGVRNS
RIVLRASDGEKVSNTVVLRVMAVPLDYRVVNNSGINLLQGVTTLIRPRHLAVEINAVLQE
LEIWYEITEPPHFGQVQRQDSRGAWKQVSSFSQRSVQRNRVRYCSTFKDIQLENVMEQFK
FKVRIRNRISEEHTFPIRVKWLRYSLLKHAPLEIEKTKKKYLNSDNLFAVIEDLEIPEDE
LHFKLLSVPKNGQILLNDQPLKRGSVFSQKDITDRKVAYELISQYHEDYDSFRFLISTKY
LDSNFYDFEVYIKSDFRNIILTNNGLNVIEGEGELITSTKLFVQTPDNKTFQYEVIQFPK
HGKLKLTNFSGSFENNDNLTTFTNKDITDKCLMYVHDDSETMFDEILVRAYSKESGKGAN
FDSEVEPLSIEIRFFISVQLKNDEKPVRVIDKIFDIVRNGQRLLTLADLCYHDPDSDFDD
GQLLYTRRGISNGDLVLTNDTLHRLYQFKQVDLEQKQVLFIHHGADFGRFVLFVTDGKHY
TSLLLEVNATDPYVKLANNTGLLVQKGKEETVSTANLSAATNQDIRNDHELTYKILSFPK
YGRIYVNNVLTDSFTQLDLIKGHVAYRHDDSNNLTDTFNFTVHAGDVHLDAGLQVRVYLE
SHQQPPRIVNKNNLLVEEGKPVKISKGKLQVIHENSPPSEIVFTVRQLPVHGYIRKFSLE
ESYLSSDQKPALSFTQQDVDEGKVQYVQTVSNQLDDHFFLDVTNGVRTVNGIEISVDIIP
RMIPLEIRNFTVFEGGSKALVEDYLKISSRHFAGLSCEFILTEQPKHGFVENSRVPGIKL
ATFTRKQVEQELIYYVHDDSEELMDSFTVIVNNTELWKQSLPRTVFVTVTAVNDEAPVVK
VNRILQVWVGSVAEITVDDLCAEDKDSSPSELVYSITPPSNGHLALKSSPNKSILAFTQA
HIIKGQLVFVHNGAMSGGFNFQVTDGLNFAPRQIFTITAQMLIISLEVNKGLGVFPGSRK
PISQHDLKAVTNDVTSAGNRTITFVVVTSPKLGRLIRVDSDDTTQEIFSFTQSMVNEGVI
MYEHLHAESADWSAEDFFTFTVSSPPSALDIQMFHVVISYEIDRHDQNSRLLANSGAIVQ
EGGRVLINKTNLDASNLLIKLPDVQRSVYEVWYQVMSLPQHGMILVGERNVTKEKPNFSQ
YVLDKFGIMYIHDNSESLNDNFTFAVWLNLKSKPATKPHSEVLEEMFNITVFPVNDQSPE
LKTKRLHLKVLQGDVSMLGAENLKVEDLDNAPAELKYTIVSNPNNGYLAMKSNLNVSIKD
FTQADIDNGKVWFVQDGSSSSGVFYFSVTDGKHRPLYKLFSLEVIPIALVLVNLTNVALP
QGQTSVTITDVQLSAVTNGKSTNIMYEITQPLKYGHLMIGNQQVTKFEQADLYSGRLSYH
LTNLTASSDVLEFMLFTAEGSLTGQVLNITVKPLVQIVSDLQISNQAAYTFGSGDLDASE
LANLTNSNPRFEVIVPPSHGRIVKKRFVNDAVFEDIQTFTQADIDSGVLLLDIDTNMTGI
NLLNDSFTFILRADAVQPAVGCFQYSIVPHSPPVVQGFTTEVHFVTSMITFKAHSTSKDE
ALVSSQNEEPAIAPQKTEPTMWPGQNHWEEGPLLNQAMGTSVSVEMKITNQVNARSPREQ
AGESNPWYIIISLVLVSVLLIVAVTSVCILLMYQKKEKTKPLVKSQTDAILSSADRCMER
SLTVPSVTVTPLLKGAERSTASTFVTVKHEQLLPAVASPTTERYLKNSFLNLDPEMIQYC
RKTNPTLKHSQYWV
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcatcctctcagacatccttacagttgcagtttcgaacaagcaagccacag
ggactgcttcttcttgcagctgggaaaaccgattattgtttaatggagctgcgctcagga
tatgtacagttgagaattaactttggtgtgggagaacgagtactgcattctcagaaaaga
tctcagctgaatgatttggcttggcacctggttgaactgcatcatgaacatgataatgtc
acgttggtaattgataaacatgatagaactagtgcaaaaatgcctggaattttttatgaa
ttaaacattgattatggagtctacataggtggtactggtaaactcgacgttccctacctt
gttggagcactacccagtttccgaggatgtattgatggtgtgtcattcaatcagtttgac
attctgaggcctctgagaccttctcctggcttcagaaacatccatgaagtttcagtgggg
tgcagtgatgaattctttgcaggtgaagaagagcccattagtttcttcagttccaggtcc
tatatttctttcccatcaaggaatgtggacaatgagcgaatctttgagtatgctttacat
acctcagctgcacgtggcttgctgctttaccatcctgggcaagcaggagatttcattgca
atggaaatggaagatggtttaattaaagcttatgttggaaaacctgaaagtagaatccat
ctttcttctcgtaggtcagtcaatgatagttgttggcactacatcaaactgaaatttact
gcagaatatttgcagctaacattggatgaagaaactgtgagaaagtcgttacctccccag
agtaagttgccccttctgaagggatccttctttgtaggtggtgtagatgacagcatacga
tcggaagtgatgaagttaatctcagtatctgggaagtatgccagaggaggttccttcaaa
ggctgcttaaggaacctgaaagccaactcagaaaagaaatcactgaagaatgttctagta
actaaggacatttcagctggatgtgaaataccaagttcttttaaaacaaatctttcttta
cagatggctgaaaagaactcttctgtgaaagcagctcctgtatttgccatttcccatgaa
agctcgatttctctgggcaaggaagacaaaagccaccttttaattctgagtaacttgatt
gtgctggagggtgaacaagcttcacttgaatctaagcatattaaagttaacttagacttt
cagaaattaggagttaaccagtcacaaattctttttgatataaaggaaccaccctctcat
ggatgcttgaagctgaatgttgaaccgttgcaggaagtaaatacatttactatgcaggat
gtgtggcaagggaagattctgtatgtccatgatggctctgaggacatttatgattatttt
aatttctccatttctgccagcagtaagaagattgtgtctccatatttgcgtggaaatgag
cagcatatgttcagcattactattactccagtaaatgatgcacctgagatcatacttcct
gggggaaacttgcttcttctcttagagaactcaaagaaacgtttgacaaatgatctgata
aaagttgtagatgaagatacagattctgtgggtctcacactttcagtgcttggaaatctg
aatgcagatgcaggatttttagaaaattcaaggcatcctggaaaagctatcattactttt
tctaatgaggatttagacaaaggtactgttttctttgttcacacaggtgtcaggaactca
aggattgttctcagggcaagtgatggtgagaaggtgagcaacactgttgtgttacgtgtc
atggcagttcctttggattacagagttgtcaacaactcaggaataaatcttctccaaggt
gttacaactcttataagacctaggcatctggcagttgaaataaatgctgtcctccaggaa
ctggaaatctggtacgagatcacagagccacctcactttggtcaggtccaaaggcaggat
tcaaggggggcgtggaagcaagtcagctctttttctcaacgctctgttcagcgcaaccgg
gtgagatactgtagcacttttaaagacattcagctggaaaacgttatggaacaatttaag
ttcaaagttaggataagaaacagaatcagtgaagagcatacatttccaatcagagtgaaa
tggttaaggtatagtctattgaaacatgctcctctagaaattgaaaaaacaaaaaagaag
tacttgaattctgataatctgtttgctgtgattgaagatctagaaatacctgaagatgag
cttcatttcaaacttctgtccgtaccaaagaatggacagatactgcttaatgaccagcct
ttgaaaagaggttcagtctttagccaaaaagatattactgatcgaaaagtggcatatgag
ttaatcagccagtaccatgaagactatgattcatttagatttctcatttctacaaagtat
ctggattcaaatttctatgactttgaagtctacatcaaatcagatttcagaaacattatt
ttgactaacaatggccttaatgttattgaaggggaaggagaattaataacaagtacaaaa
ctatttgtgcaaacaccagataataaaactttccaatatgaagttatacagtttcctaag
catgggaaattaaaacttactaatttttctggttcatttgagaataatgacaatcttaca
actttcactaataaagatataactgataaatgccttatgtatgtgcatgacgattctgag
accatgtttgatgaaattcttgtcagagcttacagcaaagagtcaggaaagggggcaaac
tttgattcagaagtagaacctttgtcaatagaaatcagattctttatttctgtccagctg
aagaatgatgagaagccagttcgcgtaattgataagatatttgacatagtgagaaatggg
cagcgattattaactttggcagatctttgctatcatgatcctgattctgattttgatgat
ggacagttgctatatactagacgtggtatttccaatggagatttggtgctcacaaatgat
actttgcatagactctatcaattcaaacaagtggacctggagcaaaagcaagtcctgttt
atacaccatggtgcagattttgggcgttttgtgctttttgtgacagatggtaagcactat
acttccttgcttctggaagttaatgccactgatccttatgttaagttggcaaataataca
ggattgttggttcaaaaagggaaagaagaaactgtttcaacagctaatctaagtgctgct
acaaaccaagacataagaaatgatcatgagcttacatacaagatactctctttcccaaag
tacggaagaatatatgtgaataatgtattaacggattcctttactcagcttgatctgata
aagggacatgtggcctacagacatgatgacagcaacaaccttactgacacatttaacttc
acagtccatgctggagatgtccatctggatgctggactacaggttcgcgtgtatttggaa
agtcatcagcagccaccaaggattgtgaacaaaaacaatctcttggttgaagaaggaaaa
ccagtaaaaatcagtaaaggaaaactgcaagttattcatgaaaatagtcctccatctgag
attgtgttcacagtaagacagcttccagtacatggatacattcggaagttttccttggaa
gaaagttatctcagttctgaccaaaagccagctttgagcttcacacagcaagatgtcgac
gagggcaaagttcagtatgtgcagacagtttctaaccaactagatgaccatttttttctg
gatgtgaccaatggtgtcagaacagtgaatggaatagagatctctgtagacatcatcccc
agaatgattccactggaaatacggaactttacggtatttgaagggggctcaaaagccctg
gtggaagactatctaaaaatttctagtagacactttgcaggactcagctgtgaattcatt
ttaactgagcagccaaaacatgggtttgttgaaaactctcgtgtacctggaataaagtta
gccacctttaccagaaaacaggtggaacaagaattaatctactatgttcatgatgatagt
gaagagctgatggacagttttactgtgatagtaaataacacagaattgtggaaacagagt
ttacctcgaacggtgtttgtaactgttactgcagtaaatgatgaagctccggttgtaaaa
gtaaacagaattcttcaggtctgggtgggttcagttgcagaaataactgttgatgacctc
tgtgcagaagacaaggactcttcaccatcagaactggtgtattctattactccacctagc
aatggacacttggctctgaagtcttctccaaacaagagcatccttgcttttacccaggct
catattattaaagggcagctggtatttgtacacaatggagcaatgtctggaggcttcaac
tttcaggtgacagatggtttgaactttgcaccccgacagatttttaccatcacagctcag
atgctgatcattagccttgaagtgaacaaaggactcggagtctttccaggttccaggaaa
cctatttcacaacatgatttgaaagctgtaaccaatgatgtgaccagtgcaggaaacaga
actataacttttgtggttgtaacttccccaaaactcggaaggctgatcagagtagattct
gatgataccactcaggaaatcttcagttttacgcagtctatggtcaatgaaggtgtgatc
atgtatgaacacttacatgctgagtcagctgactggagtgcagaagatttctttacattt
actgtatcctctccaccatcagctctggatatccagatgttccatgttgtcatatcatat
gaaattgataggcatgatcagaatagccgtcttctagcaaattcaggtgccatagtccag
gaaggaggtagagtattaatcaacaaaacaaatctagatgcttcaaacctattgattaag
ctacctgatgtacagcgctctgtgtatgaggtctggtatcaggttatgtctttaccccag
catggcatgattcttgttggagaacgaaacgttaccaaagaaaagcctaacttctcccaa
tatgtactggacaaatttggaattatgtacatacatgataattctgaatctctaaatgac
aatttcacttttgctgtttggttgaacctgaagagcaagcctgctacaaagccccatagt
gaagttttagaggagatgtttaatatcactgttttcccagtgaatgaccaatctccagaa
ctgaagactaaaagactgcacttgaaagtcctgcagggagatgtgtcaatgctgggggca
gagaatctgaaagttgaagacttagataatgctccagctgagctgaaatacaccattgtt
agcaaccccaataatggttacttagcaatgaaaagcaatctcaatgtctctataaaagat
ttcacacaagctgatattgacaatggtaaagtgtggtttgtacaggatggaagttcatct
tctggggtgttttatttcagtgtgactgatggtaaacatcgccctttatacaaactgttc
agtcttgaagtcataccaattgctcttgtcctagtcaaccttaccaatgttgcgctgcca
cagggccagacatctgtcactattactgacgttcagctgtcagccgtcacaaatggaaaa
agcactaatattatgtatgaaataactcagccactcaaatatgggcacctcatgattgga
aatcagcaggttactaaatttgagcaggcagatttgtactcgggaaggctctcttatcac
ctgacaaatcttactgcttccagtgacgtactggagtttatgctttttactgcagaaggc
agtttaacaggacaagtgctgaacatcacagtgaaacctttagtacaaattgtatctgac
ctgcagatatcaaatcaagcagcttatacatttggaagcggtgacctggatgcttctgag
ctagccaatttgacaaacagtaatcctagatttgaagtgatagtgcccccctctcacgga
agaattgttaagaaaaggtttgtgaatgatgcagtgtttgaagatattcagactttcacc
caggctgacattgatagtggtgttttgcttctagacatagacacaaatatgacgggcatc
aatctgttgaatgattcatttacatttatactcagggcagatgctgtgcagcctgctgtt
ggctgttttcagtattccattgtgccacacagtcctccagttgtgcagggttttacaaca
gaagtgcattttgtaaccagcatgatcactttcaaggctcactctacttcaaaagatgag
gcattagtctcctcacagaatgaagagcctgcaatagcaccacagaagactgaaccaact
atgtggccagggcagaatcactgggaggaaggtccactgctaaatcaggccatgggaaca
agtgtatctgtggagatgaagattacaaaccaggttaatgccaggagtcccagagagcag
gcaggtgaaagcaacccttggtacattattatctccctggtcctggtgtctgtgctgctc
attgttgctgttacttctgtgtgcattttgttaatgtatcagaagaaagagaagacaaaa
cctttagtcaaaagtcaaacagatgcaatcctcagtagtgcagatcgatgtatggaacgg
agtttgactgtgccttctgtcacagtgactcctctcctgaagggggctgagagaagtaca
gcctctacattcgtgacagtaaaacatgagcagctgcttcctgcagtggcttctccaact
acagagaggtatctgaaaaacagctttttaaatcttgatcctgaaatgatccaatattgt
cgaaaaacaaacccaactttgaagcacagtcagtactgggtatag
DBGET
integrated database retrieval system
