Pyrgilauda ruficollis (rufous-necked snowfinch): 121355654
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Entry
121355654 CDS
T07608
Symbol
TBC1D4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121355654 (TBC1D4)
Membrane trafficking [BR:
pruf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121355654 (TBC1D4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121355654 (TBC1D4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121355654 (TBC1D4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
Laminin_I
Motif
Other DBs
NCBI-GeneID:
121355654
NCBI-ProteinID:
XP_041327209
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MEKPGEGEPLSHPLQPEPEPQPEPQPASPGEKRFRLWYVGSSCLDRRTTLPMLPWLVAEI
RRRGQRQEPGGAPGSGVPAREVLLLLGSPTLRCVPASPGPAAGPGRPASPAPAVFIFEHK
AQHIARFIHNSHDLTYFAYLIKAQPDNPDSPMACHVFRATDPNQVPDVISSIRQVSKAAL
KEDAKPTKDSEDAFYDSQKFEVLYCGKVTVAHKKAPSTLIDDCIEKFSLHERQRLKLLNE
QRNNESSLDLPLCEENVPASPLDSPFEELDSPNSTSGRAAMFTIGSQTNLTNLASTRGFF
PERILEDSGFDEQQEFRSRCSSVTAVMQRRVHDTNMKIQSRRRHASAPSHVQPSDSEKNR
TMLFQVGRFEVNLISPDTKSVVFEKNFKDISSCSQGIKHVDHFGFICRESVEPGLSQYVC
YVFQCASESLVDEVMLTLKQAFSTAAALQNAKTQIKLCEACPMHSLHKLCERIEGRLYPP
RAKLVIQRHLSSLTDNEQADIFERVQKMKPESDQEENELVILHLRQLCETKQKTHIHIGE
APSVISNSAIPESTTSGGRFKLDILKNKAKKSFTSSLENIFSRGANRMRGRLGSVDSFER
CSSLASDRDTSPGDSPPATPPASPVSSAWQTFPEEGSDSPQFRRRAHTFSHPPSSARRRI
TFQNGRSQSARSPLLRQNGVEAASPVVGVRRALSESESASPGLPSSLSAPSFLKTFYQGS
GRLLQHSECDLSKSDGEGKKRTSTFCSSESLNAAGATLTPRRISWRRRIFLQVASPMNKS
PSKMQHPDGHDGSELLPLSPLAPPLEEDPLVLVLQNEDGPDKTGERKNSEELQSLWKKAI
HQQILLLRMEKENQKLEASRDELQSRKVKLDYDEVGTCQKDAINIWDKKLLNCRAKIRCD
VEDIHSTLKEGVPKSRRGEIWQFLAVQHRVRHRLPNKQQPPDISYKELLKQLTAQQHAIL
VDLGRTFPTHPYFSTHLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQA
FEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPW
FLTLFASQFSLGFVARVFDIIFLQGTEVIFKVALSLLSSQETSIMGCESFENIVDFLKTT
IPDMTKPQMEKIITQVFEMDISKQLHAYEVEYHVLQDELQENVSPCDEGEPLEKLERANN
HLKRQNMDLLEKLQVAHAKIQSLEASLETVLTRENKMKTVIQSLEQEKITYQKTLEQIVK
YLPAEVLSDCELLLKEVNYNPNNKIWSKP
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccaggggagggcgagccgctctcccaccccctccagcctgagcccgagccc
cagcccgagccgcagccggcgtcgccgggggagaagcgcttcaggttgtggtacgtgggt
tcgtcgtgcctggataggcggaccacgctgcccatgctgccctggctggtggccgagatc
cgccgccgcggccagcggcaggagcccggcggcgccccgggcagcggggtgccggcccgc
gaggtgctgctgctgctgggctcgcccacgctgcgctgcgtgcccgccagccccggcccc
gccgccggccccggccgccccgccagccccgcgcccgccgtcttcatcttcgagcacaag
gcgcagcacatcgcccgcttcatccacaacagccacgacctcacctacttcgcctacctg
atcaaggcgcagcccgacaaccctgactcccccatggcctgccacgttttccgggccacc
gaccccaaccaggttcctgatgtcatcagcagcataagacaagtctctaaagcagcactg
aaagaagatgccaaaccaactaaggatagtgaagatgccttctacgactctcaaaaattt
gaggtcttgtactgtggaaaggtgacagtggcccacaagaaagctccctccacactaatt
gatgactgcatagagaaattcagccttcacgagcgccagcgcctgaaactgttaaacgag
cagcgcaataatgagtcaagtttggacttgcccctgtgtgaagaaaatgtgccagcttct
cctctggacagcccttttgaggagctggacagccccaacagcacctcagggcgtgctgca
atgtttacaattggcagccagaccaacttgaccaacctggccagcactcgtggcttcttt
ccagagaggattttggaggactctggctttgacgagcagcaggagttccgctcccggtgc
agcagcgtcactgcagtgatgcagagaagggttcatgacacaaacatgaaaatacagtcc
cgcagaagacacgcaagtgctcccagccacgttcagccctctgattctgagaagaacagg
acaatgttgttccaggttggaaggtttgaagttaacctcatcagcccagataccaaatct
gttgtgtttgaaaagaattttaaagatatctcctcatgttctcagggtataaaacacgtt
gatcactttggttttatttgccgagaatctgtggaacctgggttaagccagtatgtttgc
tatgtgttccagtgtgcaagtgagtctctggttgatgaggtaatgctgaccctgaagcaa
gcctttagcactgctgcagccctgcaaaatgccaagacacagatcaaactgtgtgaggcc
tgccctatgcattcattgcacaaactttgtgaaagaattgaaggtagactctatccacca
agagccaaacttgtaattcagaggcatctgtcatcgctaactgacaacgagcaagcagac
atttttgaacgtgttcagaaaatgaagcctgaaagtgaccaggaagaaaatgaacttgtg
atcctacatctccgtcagctctgtgagactaagcagaaaacgcacatccacattggtgaa
gcaccatcggtcatttctaacagtgcaattccagagagcaccaccagtggtggccggttt
aaacttgacattctgaaaaacaaggcaaagaaatccttcactagctctctggaaaatatc
ttctcaaggggagccaacagaatgcgaggccgcctgggaagcgtggacagctttgagcgc
tgcagcagcctggcttctgacagagacacttctccgggcgattccccgccagcgactcct
ccagcgtcccctgtgtcctcggcctggcagacctttcccgaggaaggctcggactcccct
cagttcaggaggcgcgcacacaccttcagccacccgcccagcagtgccagacgcaggatc
accttccagaacgggaggtcccagagcgcccgctccccgctgctgcggcagaacggcgtg
gaggcggccagtcctgtggtcggggttcggcgcgctctcagtgagagtgaatctgcgtca
cctggtctcccctcctctctctctgccccttctttcctgaaaaccttttaccagggctca
ggaaggttgctgcagcactcagaatgtgacctctccaagagtgatggggagggaaagaaa
agaacatcaaccttctgcagcagtgaatctctaaatgctgcgggggccacgctcacacct
cgccgcatctcctggcggcggagaatattcctgcaggtagcttcacctatgaataaatct
ccttccaagatgcagcatccagatggtcatgatggaagtgaattgttacctttatcccct
cttgctccacccctggaggaagaccctcttgttctagtattgcaaaatgaggatggtcca
gataaaactggagagaggaaaaactcagaagagctacaaagtctgtggaaaaaagccatc
catcagcaaattctgttacttcgaatggaaaaagaaaaccagaagctggaagcaagcaga
gatgagctccaatcaagaaaagtaaaactggactatgatgaagttggcacatgtcagaaa
gatgccataaatatttgggataagaagttactaaactgcagagccaaaatccgatgtgac
gtggaagatattcattccactttaaaagaaggtgtgccaaaaagtcgtcggggagaaatt
tggcaatttttggctgtgcagcaccgagtcaggcacaggctgccaaacaagcagcagcct
cctgacatctcttacaaagaacttctgaaacaactgactgctcaacagcatgccatcctc
gtagatctaggacggacattccctacacatccttacttttccacgcacctgggagcagga
cagctatcactgtttaatctcttgaaagcgtattctttgctggacaaagaagttggttat
tgtcaaggtataagttttgtagctggagtgctgcttctacatatgagtgaagagcaggcc
tttgaaatgctgaaattcctcatgtatgaccttggcttccgtaaacagtacagaccagac
atgatgtccctacagattcagatgtatcagctctcaaggcttctacatgattatcacaga
gacctgtataatcatcttgaagagaatgaaatcagtcccagtctttatgctgcaccgtgg
tttcttacactgttcgcctctcaattttcattaggatttgtagccagagtgtttgacatt
atttttcttcaaggaacagaagtcatatttaaagtagcactgagcctacttagcagtcaa
gagacatctataatgggatgtgagagttttgagaacattgttgattttcttaaaaccact
attccagatatgactaaacctcaaatggaaaaaattattactcaggtgtttgagatggat
atttcaaaacagctccatgcctatgaagtagaataccacgttcttcaggatgaactgcag
gaaaatgtgagtccctgtgacgaaggtgaacctctggaaaagctggagagggcaaacaat
catctgaagaggcaaaacatggatttgttggagaagctacaggttgctcacgctaaaatt
cagagtctggaagccagcctggagactgttttgacacgagagaacaaaatgaagactgta
attcagtccctggaacaggagaagataacatatcaaaagactcttgagcagatagtgaag
tatttgccagcagaagtgttgtctgactgtgaactgctcctgaaggaagtaaactacaac
ccgaataataaaatatggagtaagccataa
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