Pyrgilauda ruficollis (rufous-necked snowfinch): 121355706
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Entry
121355706 CDS
T07608
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121355706 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pruf03021
]
121355706 (SMARCA5)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121355706 (SMARCA5)
Transcription machinery [BR:
pruf03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
121355706 (SMARCA5)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
121355706 (SMARCA5)
RSF complex
121355706 (SMARCA5)
WICH complex
121355706 (SMARCA5)
B-WICH complex
121355706 (SMARCA5)
NORC complex
121355706 (SMARCA5)
BRF complex
121355706 (SMARCA5)
NuRF complex (fruit fly)
121355706 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
121355706
NCBI-ProteinID:
XP_041327294
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MSAGQPPLPPHPDEPPAPPLPQGANSGEAAGTGPPCAAGLAGGDIKMEESFDDASLAKQK
EIQETDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDE
KQNLLSAGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQIRGLNWL
ISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLQNWMNEFKRW
VPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAH
RIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDT
NNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKD
IDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKL
LPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHNERQASINAFNDPDSS
KFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDN
TVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITD
EDIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKLAFTEWI
EPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILY
YRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFN
QFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARI
QRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYD
ELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPS
SAQKRKMDGTPDGRGRKKKLKL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagccgccgctgccgccgcacccggacgagccgcccgcgccgccactg
ccacagggcgccaacagcggcgaggccgcggggacggggccgccctgcgccgccggcctg
gccgggggcgacatcaagatggaggagtcttttgatgatgcatctttggcaaagcaaaaa
gaaatccaggaaacagatcctacatatgaagagaaaatgcaaacagacagagcaaacaga
tttgagtatctgttgaagcagactgagctctttgctcatttcattcagcctgctgctcaa
aaaactccaacttcacctttaaaaatgaaacctggacgtccacgaataaaaaaggatgag
aaacagaatttactgtcagctggcgactatcggcaccgtagaacagagcaggaagaggac
gaggagctgttaacagaaagctccaagacaacgaatgtctgcactcgatttgaagaatct
ccatcatatgtgaaatggggaaagctgcgtgattaccagatccgaggactgaactggctc
atttctctgtatgaaaatggcatcaatggcatcctggcagatgaaatgggtcttgggaag
acactgcagacaatttctcttcttggctatatgaaacactacagaaacattcctggacct
cacatggtgttagttcctaagtccactctgcaaaactggatgaatgaattcaagagatgg
gtaccaacacttagagcagtttgtttgattggtgacaaagaccagcgagctgcctttgta
agagatgtgttgctgcctggagaatgggatgtctgtgtaacatcatatgaaatgcttatc
aaagagaagtcagtattcaaaaagttcaactggagataccttgttatagatgaggcccac
aggattaaaaatgaaaaatcaaagttatcagaaattgtaagggaattcaagactaccaac
cggctgctattaactggaactccacttcagaacaatttacacgaactctgggcacttctc
aacttccttttgccagatgtctttaactcagctgaagattttgattcatggtttgatacc
aacaactgtctaggggatcaaaaactggtggagcgccttcatatggtgctacgaccattc
cttctccgtcgcatcaaggctgatgtggagaaaagcttgcctccgaagaaggaagttaaa
atttatgtgggcctcagcaaaatgcagcgagaatggtatacccgaatcttgatgaaggat
atagatatcctgaactcagctgggaagctggacaagatgagactgctgaacatcctgatg
cagctgcggaaatgctgcaatcacccttacctctttgatggagcagagcctggcccacct
tatacaacagacatgcatttggtcactaacagtgggaaaatggtagttctggacaaattg
ctacctaagttgaaagaacaaggctcaagggttctaatcttcagtcagatgacaagagtc
ctagatattttggaagactactgtatgtggaggaattacgaatattgcagactggatgga
caaactcctcacaatgagcgacaggcttccattaatgcattcaatgatcctgacagctca
aaatttgtgttcatgttgagtacacgagcaggaggtcttggaatcaatctggctactgct
gatgttgtaattctctatgattcagactggaatccacaagtagacctccaggctatggat
cgagcgcacagaattggccagaccaagactgtccgggtgttcaggtttattacagacaat
actgtggaggaaaggatagtggagcgtgcggaaatgaaactgcgcctggattccatagtc
atccagcaaggaagattggtggatcaaaacctgaataaacttggaaaggatgaaatgctg
caaatgatcagacatggagcgacacacgtgtttgcctcaaaggatagtgagattacagat
gaagatattgaccacattttggaaagaggggcaaagaagactgcggaaatgaacgaaaaa
ctttcaaagatgggtgaaagctcccttaggaattttactatggatactgaatctagcgtg
tataattttgaaggggaagactacagagaaaaacagaagttggcatttacagagtggatt
gaaccacctaaaagagaaagaaaagccaattatgctgtggatgcttacttcagagaggct
cttcgagtcagtgaacccaaagcacccaaggctccacggcctccaaaacagccaaatgta
caggacttccagttttttcctcctcgcctgtttgaactattggaaaaagagattctctac
tacaggaaaacaattggttacaaggtacctcgtaatcctgatctgccaaatgcagcccaa
gcacaaaaggaagagcagcttaagattgatgaggctgaacctcttaatgatgaagaacta
gaagaaaaagagaaacttctaacccagggcttcactaactggaataagagagatttcaac
cagttcatcaaagccaatgagaagtggggccgtgatgacattgaaaatatagcacgagaa
gttgaaggaaaaaccccagaggaagtcattgagtattcagctgtgttctgggaaagatgc
aatgaactccaagacatagagaagatcatggctcagattgaaagaggagaagccagaatt
cagagacgaatcagcataaaaaaggctctcgatacaaagattgggagatataaagcccct
ttccaccaactaagaatatcctatggtactaataaagggaagaattacactgaagaggag
gatcgcttcctaatctgtatgcttcacaaactaggatttgataaagaaaatgtctatgat
gaattaagacaatgtatccgaaactcgccgcaattcagatttgactggtttctaaagtcc
agaactgcaatggagctgcagaggaggtgtaatactttaatcactctcattgaaagagaa
aacatggaactggaagaaaaggaaaaggcagaaaagaagaaacgtggaccaaaaccatct
tcagcacagaagcgcaaaatggatggcactcctgatgggcgtgggagaaaaaagaagcta
aagctgtga
DBGET
integrated database retrieval system
