Pyrgilauda ruficollis (rufous-necked snowfinch): 121355922
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Entry
121355922 CDS
T07608
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121355922 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121355922 (MLH3)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121355922 (MLH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121355922
NCBI-ProteinID:
XP_041327729
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All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
MIKRLVEDVRARLRSGVTVNSLGHCVEELVLNSIDAKATCVAVRVDLEAFKIQVVDNGSG
MGKEDLKAVGKRYFTSKCSSVRDLENLTFYGFRGEALASIANMASVVEISSKTSRTAKTF
MKLFHNGQALEVCEAELNRPSGGTTVTVCNLFHQLPVRRKCMDPVLEIERVRQKVEAVSL
MHPSVSLSLRNDVSCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREINHKSGGFEISGFIS
TEGHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPASRQANSSPGRHRCG
PELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKIFLKREHLFIEPSS
EDIREFSEHNDFCLHNAPVLKPSILDEKSIQESFKKACNEIVDSYEIRSLQSKDVKRKSI
TRKKSSDLIESSKNVQETKNAPVQNTAESSDPCRNNKAETPLPSKDDTGSDLIKSNTSEQ
DRKHTSSSQKVPDMRLKPSEHLCSSFSGGARSEIREIDGCGDLGDCAENNIKNVGSRQGQ
VTQESNKVLVLNKDVIQSLLEREDPTETAVGPETVSGSSLMRLCNARRNRATAEVIGDAR
RGAVSSIPLKLCLTDLIKSVMQNESPHDCEQTETNLAINTQCRPGPVSAKDISDHKVNVV
IQSSNAKDISSNSNKEYAASLTREVCKTAGHENKPLSHRVREEIAMGTATNKRPYETSNS
TELLLATPSGIPRKKIVIKNTRRQIVVPRSQPSKKLGLSTQLGSLEKFRRYYGRVKSMLP
TPTSERNECGLPVLNSETSCDFSKNGNGYHDNFGSCETPPAEDTDSNINQGFGSLEKTLF
CSGEVSQDKRALCQSPLTLSDYSLVSNKTTSCQRSPGSLSSKLSRMKTDHKEVERRGEQF
QTDSNRKDNHSFDCESSNNDFLYNVCQTYKPSVEKMRECKSSISKEAVCSQSDGVIAESV
KSPVSSSPLSSIEGEYTVSSVLSLPAKNDCTNIICKDKSMLGESSEQNMKDTVVPHVTLQ
RNLEFSADNTCTGNPRNDSCSVWLQDFDALSGKTVYINTATGLSTYGTPPSEGFQTACIQ
DITTMAVNVVSENGFQFRCHPFRSETVLPFLPRPQKEKIQTSQNLRDAERESLQSLLLEW
DNPVFVPCPEIAVDVTSDQADSLAVKIHNILYPYRFTKDMVHSMQVLQQVDNKFIACLIN
TRNGMEKKTDGNLLILVDQHAAHERIRLEQLIADSYEKKAAACGKKKILSSSISPPLEIE
VTEEQRRFLRCCYKNLEDLGLELSFPETNNSLILVRKVPMCFIEREANELRRKRQPITKS
IVEELIQEQVELLQTTRGGARGTLPLTFLKVLASQACHGAIKFNEHLTLEESCRLIEALS
SCKLPFQCAHGRPSMLPLADIDHLQQEKQPKPNLTRLRKMARAWQLFGKKKEPI
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgtttggtggaagatgtgcgagccaggctgcgttctggagtcactgtcaac
tcactcggacactgtgtcgaggagcttgtcctcaatagcatcgatgccaaagcaacatgt
gtagctgtcagggtggatctggaagcttttaagatccaggtggtggacaatggctctggg
atggggaaagaggacctaaaggctgttggaaagcgctacttcaccagcaaatgcagctca
gtgagagacttggagaacctgactttctatggcttcagaggagaggctttggcaagtata
gccaacatggccagtgtagtggaaatctcatctaagaccagcaggacagcaaaaacgttt
atgaaactgtttcacaatgggcaagcactggaagtgtgtgaagctgaattgaacagacca
agtggcggaaccacagtcaccgtgtgcaatctgttccatcagttaccagtgaggagaaag
tgcatggatcctgtgctggaaattgagagagtgagacagaaggtagaggctgtttcgcta
atgcatccttctgtttctctttctttaagaaacgatgtttcttgttctatggtgcttcag
ctgcctaagacaagagacgtatactctcggttttgtcaaatttatggactgggcagatcc
cagaagttgcgagaaataaaccacaagtctgggggatttgagataagtggttttatcagt
actgagggacattacaataagaatatgcagttcttgtatgtgaacaggaggcttgtttta
aagacaagactacataaactaattgattttttattaagaaaagaaagcgtaatttgcaag
gcaaagagtgtccctgcaagccgacaggctaattcaagtcccggtcgccatcgctgtggg
ccagagttgtatgggatctttattctcaatgtaacctgtgcatacagtgactatgatgtg
tgcctggaacctgcaaagactctgattgagttccagaactgggatgttcttcttacttgc
atagaagaaggagtgaaaatatttttgaaacgagagcatttatttattgaaccaagtagt
gaggacatcagagagtttagtgaacataatgacttttgtttgcataatgctccagttctg
aagccttcaattcttgacgagaagagcatccaagaaagttttaagaaagcatgtaatgaa
attgtggattcttatgaaatacgtagcttgcaatcaaaagatgtcaagaggaaatccatt
actaggaaaaaaagttcagatcttatagagtcaagtaaaaatgtacaggaaactaaaaat
gctccagttcagaacactgctgaatcatctgatccatgtagaaacaataaagcagagact
ccattgccaagcaaagatgacacaggttctgatttaattaaatcaaatacctcagaacag
gatcgaaaacacactagcagttcccaaaaagtacctgatatgcgtctgaaaccttcagaa
catctttgttcctctttcagtggaggggccagatcggaaataagagaaatagatggttgt
ggtgacctaggggattgtgcagagaataatataaaaaatgtgggcagccggcaaggtcaa
gtaacacaggaaagcaataaggttcttgtcttaaataaggatgttattcagtcactgctt
gagagagaagaccccactgaaacagcagtgggacctgaaactgtctctggaagttcatta
atgagactgtgtaatgcaagaagaaacagggcaacagctgaagtgataggtgatgccaga
agaggggctgttagttcaatacccttaaagctgtgccttacagacctcataaaaagtgtt
atgcaaaatgagtccccacatgactgtgaacaaacagaaacaaatcttgcaataaacaca
cagtgtaggcctggccctgtcagtgccaaggatatttctgaccacaaagtgaatgttgtg
attcagtcttcaaatgctaaggatatttccagtaatagtaataaagaatatgcagcttct
cttactagagaagtatgcaagactgctggtcatgagaacaaacctttgtcacatcgggtg
agggaggagatagctatgggcactgctaccaataaacgaccttatgaaacatcaaacagt
acggaattgctgctggcaactccttcaggtattcctcgcaagaaaattgttatcaaaaac
actagaagacagatagttgtgccaagatcgcagccctctaagaagctgggcttgtccaca
cagctgggatcattagaaaagttcaggaggtattatgggagagttaagtctatgctacca
acacccacgtcagagcgaaatgaatgtggtctcccagttcttaattcagaaactagctgt
gacttttcaaagaatgggaatggctatcatgataacttcggcagttgtgaaactccacct
gcagaagatacagattctaatattaaccaaggttttggttccttggaaaagactttattt
tgcagtggagaagtgtcacaggacaaacgagccctttgtcagagtcctttgacattgtct
gattactctctggttagtaacaaaactacaagttgtcaaagatctccaggatcattatca
tccaaactgtccagaatgaaaactgatcacaaagaagtagaacgacgtggtgagcagttc
caaacagactcaaatagaaaagataaccattctttcgattgtgaatcctcaaataatgat
tttttgtataacgtttgtcaaacatataaaccctcagtggaaaaaatgagggagtgtaag
tccagcatttctaaggaggctgtgtgctcgcaatcagatggtgtgatagcagagtctgtg
aagagtcctgtcagctcatcacctctcagcagtatagaaggagagtacacagtctcttca
gttttatcattacctgctaaaaatgattgtactaacatcatctgtaaagataaaagtatg
ttgggtgaatcctcagaacaaaatatgaaagatactgtggttccccatgtgaccttacaa
aggaacttggaattctctgctgacaacacatgcacaggcaatcccaggaatgattcatgt
tctgtctggctccaagattttgatgctttatcgggtaagacggtgtacatcaatacagca
actggactcagtacctacggcactcctcctagtgaaggatttcaaactgcctgcattcaa
gatataacaacaatggctgtgaatgttgtttcagagaatgggtttcagttcagatgccat
ccctttagaagtgagactgtgcttcccttccttcctagacctcaaaaagagaagattcag
acaagccagaatctgagagatgctgaaagggagtctctccagtcattgcttttggaatgg
gataatcctgtttttgttccctgcccagagattgcagttgatgtgaccagcgatcaggct
gacagtctggctgtgaaaattcacaatatcttgtatccttatcgtttcaccaaagacatg
gttcattcaatgcaggttcttcagcaagtggacaataaatttatcgcttgtttaattaac
actaggaatggaatggaaaaaaagacagatggaaacctcttgattttggtggaccaacat
gcagctcatgaacggatccgcttggagcagctgattgcagattcctatgagaagaaagct
gcagcatgtggcaagaagaaaatactgtcatcttccatctctccccctttggagattgaa
gttactgaagagcaaagaagatttctacgatgctgctacaaaaatctggaggacttgggt
cttgaattatcatttcctgagacaaacaactccttgattcttgtgaggaaagtgccaatg
tgttttatagaaagagaagccaacgaattacgacggaaaagacaacctatcactaaaagt
attgtggaggagcttattcaagaacaagttgagctattgcagactacaagaggaggagca
cgagggacactgcctctgacgtttctgaaggtgttagcttcccaggcctgtcatggagct
attaagtttaatgagcatttgactttggaggagagctgcaggcttattgaagctttgtca
tcttgtaagctacccttccagtgtgctcatggaagaccttcaatgctgcctcttgccgac
atagaccatctacagcaggaaaaacagcctaaaccaaatttgactagactgaggaagatg
gcacgagcatggcagctatttggaaaaaaaaaagaacctatttaa
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