Pyrgilauda ruficollis (rufous-necked snowfinch): 121356033
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Entry
121356033 CDS
T07608
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03013
Nucleocytoplasmic transport
pruf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121356033 (PNN)
03015 mRNA surveillance pathway
121356033 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121356033 (PNN)
03041 Spliceosome [BR:
pruf03041
]
121356033 (PNN)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121356033 (PNN)
Spliceosome [BR:
pruf03041
]
Complex C
Other components
EJC/TREX
121356033 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
121356033
NCBI-ProteinID:
XP_041327996
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALAGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLE
VQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTK
PHLFYIPGRMCPATQKLMDESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEHQEV
QNEEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEVGEEKGKIGSGSGHSDAEKEQE
EDEQKHDIEMKVEEPTEVRENDKQQDDQHEEVTVVKEESENIQPVDNEQDVAEMNETDGV
EPVENENGKEIEPEIECDAQPEKVCNVPSPKKEKGIKTENNAELEETQEKTPEAQTESVA
EALSQPQSVPLAQSPQLSQSTQDTEPQTDKDENAVVSVKVVEAQAEQNQTASAESKSKTR
SRSRGRAGNKTGHTRSSSSSSSSTSSSTTSASSSSTGSSSSRSSSTSSSTTSGSTSRDSS
SSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSS
RSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaagccaaggaaagcctcaag
cacgtggacgaaaatatccgcaagctcacgggccgggaccccaacgatgtgaggcccccc
caaaacaggctgttagccctcgcaggccccggtggaggtagagggcgtgggagcttactg
ctaaggcgtggattctcggatagtggaggaggacccccagccaaacagagggaccttgaa
ggtgcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatattaaaaagccagcgttgccatcttctgtcgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcagaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcactcttcaaaaatttaaacaggagtcc
acagttgctattgctactgagaggcaaaagagacgacaagaaattgaacagaaacttgaa
gtgcaggcagaagaagagagaaagcaagttgaaaatgagaggcgagaactgtttgaagaa
agacgtgctaaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttg
caagaagaatggaatgaacacaatgctaaaataattaaatacataagaacaaagacaaaa
cctcacttattctacatacctggcagaatgtgtcctgctacgcagaagctgatggatgag
tcacagaaaaagatgaatgcgctctttgaaagcaggagaaatgaatttgcagagcagatt
aacaaaatggaggccagacccagaagacaatctgtgaaggaaaaagaacatcaggaggtg
cagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcag
caggtggaagagatggagacaggtaatcagcataatgatgtagaaatggaggaggtaggg
gaggaaaagggaaaaataggttcaggttcagggcatagtgatgcagaaaaagaacaggaa
gaggatgagcagaaacatgacatagagatgaaagtagaagagcctactgaggtgagggag
aatgacaagcaacaggatgatcagcatgaggaggtcacagttgtaaaagaggagagtgaa
aacattcagcctgtggataatgagcaggatgtggctgaaatgaatgagacagatggtgta
gaacctgtagaaaatgaaaatggcaaagaaatagaaccagaaatagagtgtgatgctcag
ccagaaaaagtgtgtaatgttccttctcccaagaaggagaaaggtatcaaaacagaaaat
aatgctgaactggaagaaacacaggagaaaacacctgaagctcagacagaatctgtggct
gaggctctgtctcagccacagtctgtgccactagcacaatcacctcagttgtctcagtcc
actcaggatacggagccccagacagacaaggatgaaaatgctgtggtgtctgtaaaggtg
gttgaagcccaggcagagcagaatcagacagcgagtgcagaaagtaagagtaagactagg
agtagaagcaggggtagggcagggaacaaaactggtcatacccgtagcagcagcagtagt
agcagtagcacttcaagcagtactaccagtgcaagtagttccagtactggcagcagttcc
agtcggagcagttccaccagcagcagcactacaagtggcagtacgagcagggacagtagc
agcagtagctctagcagtagtgagagtagaagtcgaagccgaggcagagggcataacaga
gatagaaagcgcagaaggagcacagacaggaagcgaagggatgcttctggagtagataga
agtcacaagtcctcaaaaggtggtagtagagatactaaaagctcaaaggataaaagttcg
aggtctgacagaaagagatctatatcagaaagtagtcggtcaggcaagagaacttcacgg
agtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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