Pyrgilauda ruficollis (rufous-necked snowfinch): 121356255
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Entry
121356255 CDS
T07608
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121356255 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
Other domain-containing proteins
Patched domain-containing proteins
121356255 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
121356255
NCBI-ProteinID:
XP_041328418
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MVLRGPWGSCGGPGAALALLRALRTRMLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVL
ISILLGASFSRYQVEESVEHLLAPTHSLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYG
RVIITSFRKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIV
HVLEELKAARSSNRTNFAITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYY
LQAINSLNDMVAEKWESIFCDTVELFQKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLIT
SLVLVVTLAILCCSMQDCVRSKPWLGLLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPF
VMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFT
NIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKP
AWYRFLLTARFSEDTDDSEETNTYESHLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISF
ALMGYLQVSEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQED
VLEYTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKTPQFAHFSEDIIFSK
KYNNEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYAS
SVGAPLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISV
LCLIYGINYTIDNCAPLLSTFVLGKEFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAA
VPSNLTRTLFRCLFLIALVTFFHCFAILPVILTFLPPSKKKRKEKKNPENREEIECVEMV
DMDSTRVVDQITTV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgagggggccgtgggggagctgcgggggccccggcgcggcgctcgctctcctg
cgcgccctccgcactaggatgttgcggcaggtcttgcacagggggctggggacgtccttc
tcccggctcggccacttcgtcgccagccacccggtgttcttcgcctcggcacccgtgctc
atctccatcctgctgggcgccagcttcagccgctaccaggtggaggagagcgtggaacac
ctcctggcccccacgcacagcctggccaagatcgagaggaacctggtggacagcctcttc
ccggtgaaccgctccaagcaccggctctactccgacctgcagacgcctgggaggtacggc
cgggtgatcatcacctccttccgcaaggccaacatgctggaccagcaccacaccgatctc
atcctcaagttgcactctgcagtgaccaggatccaagttcaaagacctggtttcaattac
acgtttgcccatatatgtatcctgaacaatgacaagacatgcatagtggacgacatagtg
catgtactggaggaattaaaggctgctcgttcttctaatcgaactaattttgcaatcact
tatccgattactcacttaaaggatggcagggaagtgtacaatgggcatcagctcggtggg
gttactgtgcacagcaaggaccgggtgaagtctgcagaagccattcagctcacctactac
ttgcaggcaatcaactccttgaatgacatggtggcagagaagtgggaatccattttttgt
gacactgttgaacttttccagaaatccaacaggaaagtcaaaatgtatcctttcacttcc
tcttcgctgaaggaggatttccagaagacgagcagggtgtcagaacgctacctgatcaca
agcttggtccttgtggtcaccttggccattctctgctgctccatgcaggattgtgtccgc
agcaaaccctggcttggcctgctgggattgctgacagtgacccttgccaccctgactgct
gctgggatcatcaatctcactggtgggaaatacaattccaccttcctgggaatccccttc
gtcatgttaggtcatgggttgtatgggacttttgaaatgttgtcctcctggagaaaaact
agagaagaccaacacgttaaagagaggactgcagctgtatttgcagactccatgctctcg
ttttctctcaccactgccatgtacctggtcacttttggaataggtgccagtcccttcact
aacattgaagcagccaggattttctgctgcaattcctgtattgcaattttcttcaactac
ctctatgtactctccttttatggttccagcctggtgtttactggctacatagaaaacaac
taccagcatagtatcttctgcagaaaggtaccaaagccagaggtattgcaagagaagcct
gcatggtataggtttcttctgacagccagattcagtgaggacacggatgattcagaggaa
acgaacacttacgagagtcatcttttggtgtggttcctgaaacgctattattgtgactgg
ataacaaacacttacgtcaagccttttgtagttctcttttaccttgtttatatttccttt
gccttaatgggctacctgcaggtcagtgaggggtcagacctgagcaacatcgtagcgact
gcgactcggaccatcgagtacacaactgcccagcagaagtatttcagtaactacagcccg
gtcattgggttctacatctacgagtcaatcgagtactggaacaccagtgtccaggaggac
gtattggagtataccaagggctttgtgaggatatcttggttcgaaagctacttaaattac
cttaggaaactcaacatatctactggattgccgaagaagaatttcactgatatgttgagg
aactccttcctgaagacccctcagtttgcccatttttcagaggacatcatcttttccaag
aaatacaacaatgaagttgatgttgtggcctccaggatgttcttggtggccaagaccatg
gaaaccaagagggaagaactttatgacctcctggagaccctgaggaagctctctctcacc
tccaaggtgaaattcatagttttcaatccatcatttgtgtacatggatcgttatgcctct
tcagtgggagcccccttacaaaactcctgcattagtgctttatttctgctcttcttctct
gcattcctggtggcagactctctgatcaatgtctggctcactctaactgttgcctcggtt
gaatttggagttataggttttatgaccttatggaaagtggaactagattgtatttctgtg
ttgtgcttaatttacggaattaattatacaattgacaactgtgctccactgttatcaacc
tttgtcctgggcaaagagttcacaagaactaaatgggtgaaaaatgccctggaagtgcat
ggggtagctattttgcagagctacctctgctatattgttggtctgattcctcttgcagct
gtgccttcaaatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcacc
ttctttcactgctttgccattttacctgtgatactgactttcctgccaccctccaagaag
aagaggaaagagaagaagaatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtg
gatatggatagcacccgagtggttgaccaaattacaacagtctaa
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