Pyrgilauda ruficollis (rufous-necked snowfinch): 121356263
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Entry
121356263 CDS
T07608
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121356263 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121356263 (MID1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121356263 (MID1)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121356263 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
TRIM_CC
zf-C3HC4
zf-C3HC4_2
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
121356263
NCBI-ProteinID:
XP_041328425
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDNNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSDRYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcagaactgacctgccctatctgtctggagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaactgtgcgcaccgcatcctggtctcc
cactgcgccaccaacgagccagtggagtctatcaccgccttccagtgcccgacctgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcatcgacaggtttcagaaagcctcggtcagtgggcccaactcccccagcgagacc
cgccgggagcgggcgttcgataacaacagcatgtcgtcctgcgagaaggtcctctgccag
ttctgtgaccaggaccctgcccaggaggcggtgaaaacctgcgttacctgcgaggtgtcc
tactgtgaggagtgcctgaaagccactcaccctaataagaagccattcaccggccaccgt
ctcatcgagccaatcccggactctcacatcaggggattaatgtgcttggagcatgaggac
gagaaagttaacatgtactgtgtgactgatgaccagttaatctgtgccttgtgtaaactg
gtcgggagacaccgtgaccatcaggtggcagctttaagtgaccgctatgacaagctaaag
caaaatttggagagtaacctcaccaaccttattaagaggaacactgaactggaaactctt
ctggcaaaactcattcagacctgtcaacatgtagaagtaaatgcatcccgccaagaaacc
aagctgatggaagaatgtgaccaactcattgaaataatccagcaaagacggcaaataatt
ggaaccaaaatcaaagaaggaaaggtggtgaggctgagaaaactggctcagcagattgcg
aactgcaaacagtgcattgagcgctcgacgtccctcatctctcaggctgagcagtcactg
aaggagaacgaccacgctcgcttcctgcaaacagccaaaaatatcactgaaagggtttcc
atggcaactgcatcctcccaggttctaattcctgaaattaatctcaacgatacttttgat
actttcgcacttgattttaccagggagaaaaaattattggaatgccttgattaccttaca
gctcccaacccacccaccattcgagaagagctctgcacagcctcctatgataccattact
gtgcactggacttcagatgatgagttcagtgtggtttcttacgagctgcagtacaccatc
ttcactggacaagccaacgttgttagtttatgcaactcagccgacagctggatgattgtt
cctaatatcaaacaaaaccactacacggtgcacgggttacagagcggcacaaagtacatc
ttcattgtcaaggccattaatcaggctggcagccgcagcagcgagcctggcaagctcaag
acaaacagtcagccatttaaactggaccccaaatctgctcatagaaaattgaaagtgtct
catgataacttgacagtggaacgggatgaaacatcatccaaaaagagtcacacaccagag
cgattcacgagccaagggagctacggagtagctggcaacgtgttcatcgacagcgggcgg
cactactgggaagtggttataagcgggagcacatggtatgctattggtatttcctacaag
tcagcaccgaagcacgagtggattggaaagaattctgcctcctgggtgctttgccgctgc
aataacacgtgggtggtgcgacacaacagcaaagaaatccccatcgagcccgcgcctcac
ctccggcgggttgggattttgctggactacgacaacggttcccttgccttttatgatgct
ttgaactccctacacctttacacttttgacattacatttggccagccagtgtgccccacg
ttcacggtgtggaataaatgtttgaccattataactggcttgcctatccccgaccaccta
gactcctccgagcagctggcgtga
DBGET
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