Pyrgilauda ruficollis (rufous-necked snowfinch): 121356405
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Entry
121356405 CDS
T07608
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121356405 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121356405 (HSPD1)
03110 Chaperones and folding catalysts [BR:
pruf03110
]
121356405 (HSPD1)
03029 Mitochondrial biogenesis [BR:
pruf03029
]
121356405 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121356405 (HSPD1)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121356405 (HSPD1)
Messenger RNA biogenesis [BR:
pruf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121356405 (HSPD1)
Chaperones and folding catalysts [BR:
pruf03110
]
Heat shock proteins
HSP60 / Chaperonin
121356405 (HSPD1)
Mitochondrial biogenesis [BR:
pruf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121356405 (HSPD1)
Exosome [BR:
pruf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121356405 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
121356405 (HSPD1)
Exosomal proteins of breast cancer cells
121356405 (HSPD1)
Exosomal proteins of colorectal cancer cells
121356405 (HSPD1)
Exosomal proteins of bladder cancer cells
121356405 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121356405
NCBI-ProteinID:
XP_041328655
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MRGRYPAPGRSRAAPLPRSRGRLAPPFFFNRCGPIPSRERLRPAGTADPPHSSRGAPGRA
LHGSEPAAQRCRRAVGGRGGHAGSGAGRRSRTWAGGGGGRGRGGECRAPPAAAAPDVPRE
SAEPRCCSRAAAGERERGRGAGPAPLSLAWGGYKGPAPLPAGAALGAAGPERRERGAAAM
QALRPGGGSGARTFPRAAGGATGLAGGAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKAI
DLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGV
MLAVDAITAELKKLSKPVTTPEEIAQVATISANGDQEIGNIISDAMKKVGRKGVITVKDG
KTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQDAYVLISEKKISSVQSIVPALEIA
NANRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGAV
FGEEGLNLNVEDIQPHDFGKVGEVIVTKDDTMLLKGKGEKAQIEKRIQEIIEQLEVTTSE
YEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVPGGGCAL
LRCIPALDALTPANEDQRIGIEIIKRTLRIPAMTIAKNAGVEGSLIVEKILQSPSEVGYD
AMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLSTAEAVVTEVPKEEKEPAMGGMGGM
GGGMGGGMF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccggtaccccgccccagggcggagcagagccgcccccctcccccggtcccgg
ggacgtttagcgccgccgttttttttcaaccgctgcggccccatcccatcccgggaacgg
ctacgccctgccggtaccgcggacccgcctcacagctcccgcggtgccccaggccgggcc
ctgcacggaagtgagcccgcggcccagcgctgcaggcgggctgtgggcgggcgcgggggc
catgctggttccggggccgggcggcggagccgcacatgggccggcggcggcggggggcgg
ggccgaggcggtgagtgccgagcgccgcccgccgccgccgcgccagacgtgccccgcgag
tccgcagagccgcggtgctgctcccgcgctgccgcaggtgagcgggaacgcggccggggc
gccgggcccgcgccgctctccctggcctggggagggtataagggccctgcccctttgccc
gcgggggccgcgctgggagcggctgggcccgagcggcgggagcggggggcggccgcgatg
caggcgttgcgcccgggtggcgggagcggggcccgcaccttcccgcgggccgctggtggc
gcgacgggcctggcgggcggggctgtcaccatggggccaaagggaagaacagttattatt
gaacaaagctggggaagtcccaaagtgacaaaagatggtgtgacagtagcaaaggcaatt
gacttgaaagacaaatacaaaaacatcggagctaagttagttcaagacgttgccaacaat
accaacgaagaagcaggagatggtaccactactgcaacagtcctcgcacgagccattgcc
aaggaaggctttgagaagatcagcaaaggagccaatccagtagaaattaggaggggggtg
atgctggcagtggatgccatcacagctgagctgaagaagctctcaaaacctgttacaact
ccagaagaaattgcacaggttgccacaatatcagcaaatggagatcaggaaattggcaat
ataatctctgatgcaatgaagaaagttggacgaaagggtgtgatcactgtcaaggatgga
aaaactctaaacgatgaactggaaatcattgagggtatgaaatttgacagaggctacatc
tctccatattttattaacacaactaaagggcagaaatgtgaattccaggatgcttatgtt
ttaatcagtgaaaagaaaatctctagtgtacagtccatagttccagctcttgaaattgcc
aatgccaaccgcaaacctttggtcatcattgctgaagatgttgatggagaagccctcagc
actctagtcttgaacagactgaaggttggccttcaggttgttgctgtaaaagcaccaggt
tttggtgacaacagaaaaaaccaacttaaggacatggcaattgctactggtggtgctgtg
tttggagaagagggtttgaatctaaatgtggaagatattcagcctcatgactttggtaaa
gttggagaggtcattgtgacaaaagatgacaccatgctcctcaaggggaagggtgaaaag
gctcagattgaaaaacgcattcaagaaataatcgaacagctagaggttaccaccagtgaa
tatgaaaaagagaaactgaatgagcgactggccaagctctctgatggagtagcagtattg
aaggtgggtggaacgagcgatgttgaggtgaacgagaagaaggacagggtcaccgacgcc
ctgaacgccacccgtgcggccgtggaggaaggcatcgtcccaggtggtggctgtgccctg
ctgcgctgcatcccagccttagatgccttaaccccagccaacgaggatcagagaattggc
attgaaataatcaagagaacactgagaatcccagcaatgactattgcaaagaatgccggt
gttgaaggatcattgatagttgaaaaaatcctgcagagcccatcagaagtcggctacgat
gcaatgcttggggactttgtaaatatggtagaaaaaggaatcatagacccaactaaggtt
gtgagaactgctctgatggatgctgcaggtgttgcgtctctcctatcaacagcagaggca
gtggtgactgaagttcctaaagaagaaaaggagccggcaatgggaggaatgggtgggatg
ggtggaggaatgggaggtggcatgttctaa
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