Pyrgilauda ruficollis (rufous-necked snowfinch): 121356537
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Entry
121356537 CDS
T07608
Symbol
DYNC1I2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04145
Phagosome
pruf04814
Motor proteins
pruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121356537 (DYNC1I2)
09142 Cell motility
04814 Motor proteins
121356537 (DYNC1I2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121356537 (DYNC1I2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121356537 (DYNC1I2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pruf04812
]
121356537 (DYNC1I2)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
121356537 (DYNC1I2)
Cytoskeleton proteins [BR:
pruf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
121356537 (DYNC1I2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
121356537
NCBI-ProteinID:
XP_041329037
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEVLPVQEESDLEKKRREAE
ALLQSMGLTPESPVVPPPTSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHS
DSDLGRGPVKLGMAKITQVDFPPREIVTYTKETQTPVMTQPKEDEEEEDDVVAPKPLVEP
EEEKTLKKEEEEEAAPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSG
RDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEP
DGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTP
VQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVHKQS
KAVAVTCMSFPIGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGINCHAAVG
PVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRL
DLWNLNNDTEVPTASITVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRGD
EWTRFGRTLAEINANRADAEEEAATRIPA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagcgagctgaaggcggagttggagcgcaagaagcaacgattagctcaa
atcagagaggagaagaagagaaaggaggaagaaagaaagaagaaagaaactgaccagaag
aaagaagttcttccagtacaagaagaatctgatcttgaaaagaagagaagagaagcggaa
gcattgcttcagagcatggggttgacacctgagtctcctgttgtccctcctcctacctct
ccgtcctccaaatccgtgagtaccccaagcgaggctgggagccaggactctggggatggt
gctgttggatcgaggacgctgcattgggatactgatccatcagttcttcagctccactct
gattccgatctgggacgtggacctgttaaacttggaatggctaaaattacacaagttgac
tttcctcctcgagaaattgttacctacacaaaggagacacaaacacctgtcatgactcag
cccaaggaagatgaggaggaggaagatgatgtggttgcaccaaaaccattagttgaacct
gaagaagaaaaaacattaaaaaaagaagaggaggaagaagctgcccctcatgaactcaca
gaggaagaaaagcaacaaattttgcattctgaagaatttttaagtttttttgaccactcc
acaaggattgttgaaagagccctttctgagcaaatcaacattttctttgactacagtgga
agagacttagaggacaaagaaggagagattcaagcgggagcaaaactgtccttaaacagg
cagttttttgatgagcgttggtcaaagcatcgtgttgtcagttgtctggactggtcatct
cagtatccagagttacttgtagcctcttacaacaacaatgaggatgcgccgcatgagcct
gatggggtggcccttgtatggaatatgaagtacaagaaaactaccccagagtatgtcttt
cactgccagtctgcagtgatgtcagctacatttgcaaaattccatcccaatctggtggtt
ggtggcacatactcgggccagatagtgctgtgggataatcgcagcaataagagaacccca
gtgcagagaacgccactgtcagctgctgctcacacgcaccctgtgtactgtgtaaatgtt
gttgggacccagaatgctcataatttgattagtatctcaactgatgggaaaatatgctct
tggagtttggatatgctttcccaaccacaggatagcatggagctggttcacaaacagtcc
aaggctgtggctgttacctgcatgtctttccctattggagatgtcaacaactttgttgtt
ggcagtgaagaaggctcagtgtacactgcatgccgtcatggcagcaaagctggaatcagt
gagatgtttgaaggacaccagggaccaatcacaggtatcaactgccatgcagcagttgga
cctgtagacttctcacatctttttgtcacctcttcttttgactggacagtaaagctttgg
acaacgaagaataacaaacctctctactcctttgaagacaattctgattatgtttatgat
gtgatgtggtctccaactcaccctgccttgtttgcctgtgtggatgggatgggcaggctt
gacctgtggaatctcaacaatgatactgaggtacccactgcaagcatcaccgtggagggc
aatcctgctctgaaccgcgtgagatggacacattctgggagagagattgctgtaggtgac
tcagagggacagatagttatatatgacgtgggagagcaaatcgcagttccccgcggggac
gagtggactcgctttggccgaacgctggcggagatcaacgccaacagagccgacgcggag
gaggaggctgcgacccgcatcccggcctag
DBGET
integrated database retrieval system
