Pyrgilauda ruficollis (rufous-necked snowfinch): 121356573
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Entry
121356573 CDS
T07608
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121356573 (JMJD1C)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121356573 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
121356573
NCBI-ProteinID:
XP_041329123
LinkDB
All DBs
Position
Unknown
AA seq
2520 aa
AA seq
DB search
MAVETRPELVGKRFLCLGGEEPPESGRWRAGVIRAVSQRDSHSPDLAVYVEFDDLEWEKR
EWVKVYEDFAAFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYNSITAVE
FLVDKQLDFITEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQGPYSL
NGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFLDDVVHS
LLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQAAAPRQNSHQQQRNTRP
NKRKGSDSSMPDEEKMKDERYDYIGRGENPKTKNKHFLSKRRKPEEDEKKLNVKRLRTDN
ISDYSESSDSEISSKRLTDSSSEQNSENELKSKNSSKINGEEGKSQTTEGVEQTLTDRQS
PWDEVQQDKNHEETERLKSSVLDHQEKSSLHAAEQPTLYEQNAKDPPVQDCNSEKHHTVE
LKNEQFLPRPPTPKCVVDVSNKNSSEKENQDNAASTFGLQTVQKIESHSSDLKQQFANAN
FLEARKQEADQSWVSSVGKTDLIQPGVVKTLPVNEHLNSEKVQYGSFMSSLNVASLAEES
KLRKQSPVPDSVKSKSSASVDHPKTKSPDVKPKFTQSSDTVKSKVSSQNSHATGLTRSAN
KTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQETGTNHISPYLHQ
HNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINTHPLSSASHHSVHHPHL
LPAVLPGVPAASLLGAHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQAHPSASYN
QLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPSPWLHQPTPVTSAD
SLGLRSHIPVRPSSADPLRPLKLTTHSSPPLSKSIVEHRKEELERKAFAEPLRSVTTAPV
KSELEQSRTQTAKESHMHRHYADPMLNQLPRPPQETGERLSKYKEEHRRILQESIEVAPF
TAKMKALEGERENYSRVTSLSSSPKSHSVKYEKDAERSVSELYKMKHSVTQNLPQSNYFT
TLSNSVVNEPPRSYPSKEASGVYVDKQSSCPSTAASPQALPSYISSLSKPPPLIKHQPES
EGSTSKIPEQLSQSVQSHSVNSFRSDSRSPTQLSVSSSNTLRSMPALHRAPVFHPPVHQN
LEKKESSYSSLSPPTLTPVQPVNAGGGKIQELQKPPTLVPEPKEAQTVYKGTSEQNLSEM
WKSNNAPNNEKVDWHTERMSGKSQSATASVIVRPPSSTKYENVPVMQSASKDRVSERSSA
VTNLADCLKTAEARETGRVILPNVNSDSARTQYEKKFAAVSQGSIPRAVTPTTTIICSTK
TDVTASAAMTTSVSSRGSSEVTDSVSSAVSCAPESAAPRAAGQAAQPQECKVSTAAPVTS
AAGSAAQPASGFSTSTDFVHLKKHKAALAAAQFKSSNAAETESNSVKNQTFSTSLSLDSA
IVCNTINKANSVGSGQTSQTSQPNYHTKLKKAWLTRHSEEDKNTNKKDNSGNSVSEIIKP
CTVNLIASTSNDLQNNIDSKILADKFVKEDKHPRRKGKRTYESGSESGDSDESESKSEQR
TKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKEKSKLKLQSGSNSTGIPRSVLK
DWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEPTHSPVFCRFYYFRRL
SFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYILDIIGDKFCQLVTSE
KTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSS
RDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIREKFEIKSHCQCTIKQN
TQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKSETNGNTSPRSDVSTDSKL
TPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEGKDQDNLESPNCKSSPPASQNN
EQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASGKSGRTMPNILDDIIASVVENK
IPPNKTPKINVKSEIKEEPKDDKKSIQDDCSKRYSDIQYSWICDKHVLWLRDHKNTNNWK
LFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCKDSIISNTNVKEFWD
GFEDVSKRQKVKNGETALLKLKDWPSGEDFKAMMPARYEDLLKSLPLPEYCSPEGKLNLA
SHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGVLSK
SGVLKKLEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFLQKIAKEQGLEVLPE
HDPIRDQSWYVNKKLRQRLFEEYGVKTCTVIQFLGDAIILPAGALHQVQNFHSCVQVTED
FVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKIHEGEMEDMDEN
NT seq
7563 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcctcggcggcgag
gaaccgccggagagcgggcgctggcgggctggggtcatccgcgccgtgtcccagcgggac
tcgcacagccccgacctggcggtatatgtggaatttgatgaccttgaatgggaaaagcga
gaatgggttaaggtttatgaagattttgcagccttcttggtggagtaccagctggtctgg
gcgaaaagaaaggacccaagccagactcagggatcaaagatcaaacaaattcaatggcct
gcattgacattcaagcccttggttggaaaaagtgtatacaattcaattactgcagtagaa
ttccttgtggacaaacagctggatttcataactgaagatagtgcctttcagccctatcag
gacgacgtagacagtctaaacccagttctcagggataacccgcagttacatgaggaggta
aaagcctgggtaaaggaacaaaaggttcaggagatttttatgcaaggtccgtactcctta
aatggttatagggtgagagtgtacagacaggattctgccacccagtggttcactggcatc
atcactcaccatgatctcttcacccgcactatggtggttatgaatgaccaggtgttagaa
cctcagaatgttgatccttctatggttcagatgacctttctagatgatgttgttcactct
ttgttgaaaggtgaaaatattggcatcacttcacgccgacggtctcgttccaaccagaac
agcaacacagttcacggtcattatacacgtgcacaagcaaatagtcccagaccagcaatg
aattcccaagctgcagcaccaagacagaattctcaccagcaacagaggaatactcggcca
aataagaggaaaggctctgatagcagcatgcctgatgaagagaagatgaaagatgaaaga
tacgattatataggtcgaggagaaaaccccaaaaccaaaaataaacactttcttagtaaa
agaagaaaacctgaagaagatgaaaaaaaactaaatgtgaagagactgcggacagacaac
atctcagattattctgagagcagtgactcagagatttcaagtaaaagattaacagattca
tcctcggagcaaaattcagaaaatgagttaaaaagcaagaactcttcaaagataaatgga
gaagaaggaaaatcccaaactactgagggagtagaacaaacactaacagacagacagtct
ccatgggatgaagtacagcaggataaaaaccatgaagagacagaaagactgaagtcatcg
gtcttggatcatcaggaaaaatcttcgctccatgcagcggagcagccaacactttatgag
cagaatgccaaggatccacctgttcaagactgtaattcagaaaaacatcatactgtggag
ttaaaaaatgagcagtttttacccagacctcctactcctaagtgtgttgttgatgtttct
aataaaaacagctctgaaaaggagaaccaggataatgctgcaagtacctttggtttgcaa
acagttcagaaaatagaatctcacagcagtgatttaaagcagcagtttgcaaatgcaaat
ttccttgaagcaagaaaacaggaagctgatcaaagttgggttagcagtgttggtaaaacg
gatttgatacaacctggggttgtaaaaacattaccagtaaatgaacacttaaattctgaa
aaagtgcagtatggctcatttatgtcttcgttaaatgtagcttctctagcagaagagagt
aaactgcgtaaacaaagtccagtccccgattctgtgaagtcaaaatctagtgcttcagtt
gatcatcctaaaacaaagtcacctgatgttaagcctaaattcacccaatcttctgatact
gtgaagtcgaaggttagttcccaaaacagccatgctactggattaacaaggtcagccaat
aaaactgatcatgatttgcctaggtctagttttcatccagttccagctagagttagtgct
ctagaagctactaagagtcctcttatcattgacaagaatgaacatttcacagtatacagg
gaccccactctgattggacaagaaacaggaactaatcacatttcaccttacttgcatcag
cataattatcctctgcattcctcatcccaccgaacctgtttaaatccaaacgcacatcat
cctgcattaactggttcatcccatctgctcgctgggtcttcagctcaggctcccttgtcc
gctattaacactcacccccttagtagcgcatcccaccattctgttcatcaccctcatcta
cttcccgcagtgttgcccggagtgcctgctgcctccttgctgggtgcccacccgcgacta
gagactgctcatgctagcagcttaagccatttggcattagcacaccagcagcagcaacag
atgttacaacaccagtctccacatcttctcggacaagctcatccttctgcttcctataat
cagctagggctttatccaattatttggcagtatccaaatggaacacatgcttactcagga
ctcggtctgccctcctccaaatgggtccacccagaaactcctgttaacgcggaggcttcc
ttgagaaggaatactcccagcccctggttacaccagcccaccccagtgacctcagctgac
agccttggtttacggagtcacattcctgtgcgaccatccagcgcagatccccttcggcct
ctcaaactgacaacgcattccagcccgcctttgtccaaaagtattgtagagcatcgaaaa
gaagaactggagaggaaagcttttgctgaacctttgcgttctgttaccactgcgcctgtg
aagagtgagctagagcagagcagaacacagacagcaaaggagagccatatgcacagacat
tatgcagatccaatgttgaaccagctgccaaggccaccacaggagactggggagcgactg
agcaaatacaaagaagaacacagacggatactccaagaaagtattgaagttgctcctttt
acagctaaaatgaaggcactggagggagagagagagaactactccagggtaacatcctta
tcttcaagtcccaaaagccattcagtaaaatacgagaaagatgctgaacgctctgtgtca
gaactgtataaaatgaaacattcagttacacagaatttgccacagagtaactatttcact
accttgtctaacagtgtagtaaatgaaccaccaagatcgtacccatcaaaggaagcttca
ggtgtatatgttgataagcaaagtagttgtccttcaacagcagctagtccccaggctctg
ccctcctacatttcttccctttcaaaaccgccacctttaattaagcaccaaccagaaagc
gaaggctctacaagcaagatacccgagcagctttcacaatcggtgcagtctcactctgta
aattctttcagaagtgacagcaggagccctactcagttgtcagtgtcatcttcaaataca
ctccggagtatgcctgccttgcatagggcccctgtgtttcaccctcctgtgcaccagaac
ctggagaagaaggagagcagctacagcagcctttcacctccaactctgacccctgttcaa
cccgttaatgctgggggtggcaaaatacaggagttgcagaaaccaccaactttagtacct
gagcccaaggaagcccaaactgtttacaagggcacttctgaacagaatttatcagaaatg
tggaagtctaataatgccccaaataatgaaaaagtggattggcacactgaaagaatgagt
ggaaagtcgcagtccgctacagcatctgttattgtgcgtcctccttctagcacaaaatat
gagaacgtaccagtaatgcagtctgcttccaaagatcgagttagtgagagatcttcagct
gtgacaaatctagcagattgcctgaaaacagcggaagccagggagactggaagagtcata
ctgccaaatgtgaactcagacagtgctcgcacacagtacgaaaagaaatttgcagctgtc
tcgcaaggcagcattcctcgtgctgtcacccctaccacaactatcatctgcagcaccaaa
acggatgtcactgcatcagcagcaatgacgaccagcgtgtcgagccgggggagctctgaa
gtgactgactcggtgtcgagcgcggtgtcctgcgcgccggagagcgcggcgccgagggcg
gccggccaggcggcgcagccccaggagtgcaaggtcagcactgcagctccggttacatcc
gctgctggcagcgccgctcagcccgcctcgggattctccacctctaccgactttgtccat
ttgaaaaagcacaaggcggcgttggctgcagctcagtttaaaagtagcaacgccgctgag
accgagtccaactctgtgaaaaatcagacattttcaacctctctctccctagacagtgct
atcgtctgtaatacaataaacaaagcgaactctgtaggcagtgggcaaacttcccagacg
agtcagccaaactaccacactaaactgaaaaaggcttggctaacaaggcattcagaggaa
gataaaaacactaataaaaaagataattcagggaacagtgtttcagaaattattaagccg
tgtactgtcaatttaatagcttctacatcaaatgatttgcaaaataacatagatagcaaa
atcttggcagataagtttgtgaaggaagataagcacccaaggagaaaaggaaaacgaacg
tacgagtctggctctgaaagtggtgactctgatgaaagcgagagcaagtcagagcaaagg
actaaacggcagcccaagccaacttacaaaaagaaacaaaatgatttgcagaaaaaaaag
ggtgataccgaggaagaagtgaaaccaaatggtgttcttagcaggagcgccaaagaaaaa
agcaagctgaagttacagagcggcagtaacagcactggtatccctcgctcagtgttaaaa
gactggcgcaaagtaaagaagctgaagcaaacgggagagtcctttttgcaggatgattct
tgttctgaaataggaccaaatttgcaaaaatgcagagaatgtaggttaataagaagtaag
aaaggagaagaaccaactcactcaccagtattttgtagattttactactttcggcggttg
tcttttagtaagaacggagtggttaggatagatggtttctcctctcccgatcaatatgat
gatgaagcactgagtttatggacacatgaaaactatgaagatgatgaactggacctagaa
acttctaaatacattctagatatcataggggataaattttgtcagttggtaacctctgag
aaaacagccatgtcctgggtgaaaaaagacgccaaaattgcatggaagagagcagtgaga
ggagtccgtgagatgtgtgatgcatgtgaagccacattatttaacattcattgggtctgc
caaaaatgtggatttgtggtctgcctagattgttacaaagcaaaggaaaggaaaagttct
agagataaggagttgtacgcctggatgaagtgtgtgaagggacagcctcatgatcacaag
cacctgatgccaacacagattattccaggctctgttttgacagatcttttagatgctatg
cacaatattagagaaaaatttgaaattaaatcccattgtcagtgcaccatcaagcagaac
acacaagctggcaagctccctgcaatgaatggtgtgtctcaggttttgcagaatgtcctt
aaccacagtaataaaatttctctgtgtatgcctgagtctcaacagcagaatactcctcaa
aagtctgagacaaatggtaacacaagtccaaggagtgatgtgagcacagacagcaagtta
acaccacctgaatcccagtccccactgcactggctggctgatcttgcagagcagaaagcc
agagaagaaaaaaaagagaacaaagaatgtccttctggaaaacattcgaaggaagggaag
gaccaggataatttggagtccccaaactgtaaaagttcccctcctgcatcccagaacaac
gagcagggctcaaccttacgagatctgttaactacgacagcaggcaaactgcgtctgggt
tctacagatgctggcattgcttttgctccagtgtactctacaggaacagcaagtggcaag
agtggaaggactatgccaaacattcttgatgatataattgcttcagtagtagaaaacaag
attccaccaaataaaacaccaaagataaatgtaaaatctgaaataaaagaagagccaaag
gatgataaaaaaagtattcaggatgactgcagtaaacggtacagtgatatccagtattcg
tggatctgtgacaagcatgttctgtggctcagagatcataaaaacaccaacaactggaag
ctcttcaaggagtgctggaaacaaggaaggcctgttttggtgtctggtatgcataagaaa
atgaacttcagcctgtggaaagctgagtcaatcagtctggattttggaaaccagcaagca
gatatcttgaattgcaaggacagtatcatttcaaacaccaatgtcaaggagttctgggat
ggttttgaagatgtttcaaaacggcagaaagtaaaaaatggagaaacagctctgctaaaa
ctgaaggattggccttctggtgaagatttcaaggccatgatgccagcaagatatgaggac
ttactaaaaagtttacccttgcctgaatattgtagtccagaaggaaaactaaacttggct
tctcatctgccaggattttttgtccgtccagatttgggacccagactgtgcagtgcatat
ggtgtggctgctactaaagaccatgacataggaaccacaaatctccatattgaagtttct
gatgtcgtgaacatccttgtttatgttggcatagccaaaggaaatggagtactttccaaa
tcaggggttttgaagaagttggaagaggaagatttggatgaccttttaaggaagcggttg
aaagattcaagtgaattacctggtgctttgtggcacatttatgctggcaaagatgctgac
aagataagagagtttctgcaaaagatagcaaaggagcaaggcctggaagttttaccagag
cacgatccaatccgtgaccagagttggtatgtgaacaaaaaacttcgccaaagacttttt
gaagaatatggagtaaaaacctgcacagttattcagttccttggtgatgctattattctg
ccagcaggagcacttcatcaggtgcaaaattttcacagctgcgttcaagtaacagaagac
tttgtgtctccagaacatcttgtacagtcatttcacctaacgcaggagctgaggctgtca
aaggaagaaatcaattacgatgataaactgcaggttaaaaatatcttgtaccacgcagtt
aaagaaatggtgagagctttgaagattcacgaaggtgaaatggaagatatggatgagaac
tga
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integrated database retrieval system
