Pyrgilauda ruficollis (rufous-necked snowfinch): 121356705
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Entry
121356705 CDS
T07608
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pruf03041
]
121356705 (DDX18)
03009 Ribosome biogenesis [BR:
pruf03009
]
121356705 (DDX18)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121356705 (DDX18)
Spliceosome [BR:
pruf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121356705 (DDX18)
Ribosome biogenesis [BR:
pruf03009
]
Eukaryotic type
90S particles
Helicases
121356705 (DDX18)
Pre-60S particles
121356705 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
121356705
NCBI-ProteinID:
XP_041329333
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MSVPAAASNLPMRLLRRKIHKRNLKLRQRNLKLQAAQGAVPSPGEAASQGPPEEEEVEEA
ALPEEAAAAEEGAEPADGAGPRSGEKKKKKKKKRKAVANGGDDTETKKAKTEEDESAEAE
DGDKQDSGEKEVEEEEDEVPSLPLGVTGAFEDNSFSSLAGCVSENTLKGINDMGFTHMTE
IQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRELA
MQTYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMY
KNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEPL
YVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYEL
LNYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPD
DPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQ
LEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYDVNNLDLPKVSLSFGFKVPPFVDLN
VNSNHGRRLQKRGGGGGFGYQKSKNVHKAKIFKHISKKSDNRQFSR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgccggctgctgccagcaacctgcccatgcggctgctccgcaggaagatccac
aagcgcaacctgaagctgcggcagcgcaacctgaagctgcaggcggcccagggggcagtg
ccctcgccgggcgaggcggcttctcagggacccccggaggaggaggaggtggaggaggcg
gcgctgccagaggaggctgcagcggccgaggagggcgccgagcctgcggacggagccgga
ccccgcagcggggaaaagaagaaaaagaagaagaaaaagagaaaagcggtggccaatgga
ggagatgatacagaaaccaaaaaagcaaaaactgaagaagacgaatctgcagaggcagaa
gatggagataagcaggactctggagagaaggaagtggaagaggaggaggatgaggtgccc
agtttgccactaggtgtaacaggtgcttttgaagacaattccttttcttccctggctggt
tgtgtcagtgagaatacgttgaaaggcataaacgacatggggtttacacacatgacggaa
attcagcataaaagtatcaagcctcttttggaaggcagggatattttagcagctgcaaaa
acaggcagtggaaaaacacttgcgtttctcattcctgcagtagagctcatctacaagctg
aaattcatgcctaggaatggaacgggtgttattattctttctcctactcgagagctggct
atgcaaacctacggagttcttaaagaacttatgaatcatcacgttcatacctatggtctg
ataatggggggcagtaacagatcagcagaagcacagaagcttggaaatggaatcaacatc
attgtagccacaccaggaagactgctggatcatatgcagaacactccaggtttcatgtac
aagaacttgcaatgtttggtaattgatgaggcagatcgaatcttggaggttggatttgaa
gaagaaatgaaacagatcataaaacttttaccaaagcgcagacagacgatgcttttctct
gccacacagaccagaaaggtcgaagatctggccaagatctctctgaagaaagagccactg
tatgttggggttgatgataacaaggagacagcaacggtagatggtctggaacagggttat
gtggtctgtccatctgaaaaaagattccttttgctcttcacattcctcaagaagaaccgg
aagaagaaactgatggtatttttttcttcatgtatgtcagtgaagtaccactatgaatta
ctcaactacattgatctgcctgttttggccattcatggcaagcagaaacagaccaaacgt
actacaacatttttccagttctgtaatgcagagtctggaatactgctgtgcactgatgtg
gctgccagaggactggacattcctgaggttgactggattgtccagtatgaccctccagat
gatccaaaggaatatatccaccgtgttggtaggactgccagaggaataaatggtagggga
catgctctgctcatcttaagaccagaagaactgggcttccttcgttatctgaaacaagcc
agggtaccactaagtgaatttgaattttcttggtcaaaaatctcagacatccagtctcag
ctggaaaaactgatagagaagaactacttccttcacaagtcagcccaggaggcttacaaa
gcttacatcagagcttacgactcccattctctgaagcagatctatgatgtcaataatttg
gatcttcccaaagtcagcctttcgtttggttttaaagttcctccatttgttgacctcaat
gtgaacagcaaccatggcagaagactacagaaaagaggtggaggtgggggatttggctac
cagaaatcaaagaacgtccacaaagcaaaaatcttcaaacacatcagcaagaaatctgac
aaccgacagttttctcgttaa
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