Pyrgilauda ruficollis (rufous-necked snowfinch): 121356725
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Entry
121356725 CDS
T07608
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pruf00536
]
121356725 (SLIT2)
Glycosaminoglycan binding proteins [BR:
pruf00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121356725 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
hEGF
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_3
EGF_Teneurin
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
121356725
NCBI-ProteinID:
XP_041329403
LinkDB
All DBs
Position
Unknown
AA seq
1528 aa
AA seq
DB search
MMCGWGKLTLSLGLLLAMAGAVAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKINTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTNLPET
ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT
ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA
IQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAK
EQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLN
NNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESVQHKM
FKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNL
LANPFNCNCHLAWLGDWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSC
SPLARCPAECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTL
IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVP
EGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTP
SKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHAC
ISNPCQHGGTCHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYT
CLCPPEYTGELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFDDCQ
DNKCKNGAQCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQNGAQCIIKES
EPICQCLSGYQGEKCEKLISINFVNKESYLQIPSAKIRPQTNITLQIATDEDSGILLYKG
DKDHIAVELYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSIDGGSP
KIITNLSKQSTLNFDSPLYVGGMPVKNNVAALRQSPGQNGTSFHGCIRNLYINSELQDFR
NVPLQVGILPGCEPCHQKVCVHGTCHATSQSGFSCECEGGWTGPLCDQQTNDPCLGNKCV
HGTCLPINAFSYSCKCLQGHGGVLCDEEEMLLNPCQSIRCKHGKCRLSGLGKPYCECGSG
YTGDSCDKEISCRGERVRDYYQKQQGYAACQTTKKVSRLECKGGCSAGQCCGPLRSKRRK
YSFECTDGSSFVDEVEKVVKCGCTNCPS
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggctgggggaagctcaccctgtccctggggctgctgctggcgatggcgggc
gcggtggcgccgcagccgtgcccggcgcagtgctcctgctcggggagcaccgtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgcaacaccgagaggctggat
cttaatggaaataacatcacgagaatcacgaagactgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattaatactattgaaagaggagcattccaggat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctttctgagctg
ctcttcctggggactccgaagttatacaggcttgatcttagtgaaaatcagattcaagca
ataccaaggaaggcatttcgaggagcagtagacataaaaaatctgcaactggattacaac
cagatcagctgtattgaagatggggcgttcagggctctgcgtgacctggaagtgcttact
ctcaacaataacaacatcacccgactatccgtggcaagtttcaaccatatgcccaaactc
agaacattccgccttcactccaacaacctgtactgcgactgccacctggcctggctgtcg
gactggctgcggcagcggccgcgcgtggggctctacacgcagtgcatgggcccgtcgcac
ctccgcgggcacaacgtggccgaggtccagaagcgcgagtttgtctgcagcggtcaccag
tcctttatggctccatcctgcagtgtcttgcactgccctactgcatgcacctgtagcaac
aacattgttgactgtcgtggaaaaggccttactgaaatcccaacaaaccttccagaaacc
atcactgaaatacggctggagcaaaattcaatcaaggtcatacctcctggagctttctcc
ccctacaaaaagcttcgaagaattgacctgagcaataaccagatctctgaagcagctcca
gatgctttccagggcttacgttcgcttaattcactggtcctctatggcaataaaatcaca
gaacttccaaagggcctgtttgaaggactcttttctctgcaactgctattattgaatgcc
aacaagatcaattgtttgcgagttgatgcgtttcaagatctgcacaacttgaatcttctt
tctttgtatgacaacaagcttcagaccattgcaaaaggcaccttctcacccctacgtgcg
attcagaccttgcatttggctcagaacccatttatctgtgactgccatctgaagtggctg
gcggattaccttcacacaaaccccattgagaccagtggtgcccggtgcaccagcccccgc
cggctggcaaacaaaaggatcggccagatcaaaagcaagaaattccgctgctcagctaaa
gaacagtatttcattccaggcactgaagattacagatccaaattaagtggagactgcttt
gcagatttggcttgccctgagaaatgtcgctgtgaaggaaccacagtggactgctccaat
cagaaactcaacaaaattcctgatcacattccccagtacacagcagagttgagactaaat
aacaatgaattttcagtcctggaagctactggaatctttaagaaacttcctcagctgcgt
aaaataaacctgagcaataacaagattacagatatagaagaaggagcatttgatggagcc
tctggtgtgaatgaactattgctcacaagtaatcgtttggaaagtgttcaacacaaaatg
ttcaaaggactagaaagtctcaaaacactgatgctgaggagcaacagggtaagctgtgtg
ggaaatgacagcttcacagggctgagctctgtccgcctgctctcgctgtatgacaaccag
atcaccaccgtggcacccggctccttcgacacgctgcactcgctctctacgctaaacctc
ttggccaatcccttcaactgcaactgccacctcgcatggcttggagactggctaaggagg
aaacgcattgtgacggggaaccctcgctgccaaaaaccctacttcctcaaagagattcca
atccaggatgtggcaattcaggattttacatgtgatgatggaaatgatgacaatagctgt
tctcccctggcccgctgccctgcagaatgtacttgtctggacacggtagttcgctgcagc
aacaaaggtctaaaagctttgcctaagggcatcccaaaagatgtgactgaactttatttg
gatggaaatcagtttacccttgttccaaaagagctttccaactacaagcacttgacactc
atagatttaagtaacaacagaatcagcactctttctaatcagagcttcagcaacatgact
cagctgctcaccttaattcttagttacaaccgcctaagatgtattcctgcacggactttt
gatgggttgaaatcacttaggttgttgtctttacatggcaacgatatttctgttgttcct
gaaggagcctttaatgatctttcagcattgtcacacctggctattggcgcaaatcctctt
tattgtgattgtaatatgcagtggctatctgattgggtaaaatcagaatacaaagaacct
ggtattgcacgttgtgctggtcctggagaaatggcagataaacttcttctcacaactccc
tctaagaaatttacttgccaagggcctgtggatgttaatattcttgcaaagtgtaatccc
tgtttatcaaatccatgtaaaaatgatggaacctgcaataatgatccagttgacttctac
agatgtacatgcccatatggtttcaagggtcaagactgtgatattcccattcatgcttgc
attagtaacccgtgccagcatggtggaacttgtcatttgaaagaaggagaaaaagatggt
ttctggtgcacttgtgcagacggatttgaaggtgaaaactgtgaagtaaatgttgatgac
tgtgaagacaatgactgtgaaaacaattccacttgtgtggatggaattaataactatact
tgcctttgtccacctgaatatacaggtgaactctgtgaggagaaattagatttctgtgcc
caaaacctgaatccttgccagcatgattcaaagtgtatcttgacacccaaaggatacaaa
tgtgattgcacacctggatacgtaggtgagcattgtgatattgactttgatgactgccag
gacaacaagtgtaaaaacggagcgcagtgcactgatgcagttaatggatacacgtgcatt
tgcccagaagggtacagtggcttgttttgtgaattttcaccgccaatggttctgcctcgc
accagcccttgtgataattatgaatgtcaaaatggggcccagtgtatcataaaagaaagt
gaaccaatctgtcagtgtttatcaggctaccagggtgagaaatgtgaaaagctgattagt
ataaactttgtcaacaaagagtcatatctgcaaatcccttcagctaagatacgcccccaa
accaatatcactctacagattgccacagatgaagacagtgggatcctgctgtacaaaggc
gataaagatcatatagcagtggaactgtaccggggtagagtgagggtcagctatgacaca
ggatcatatccagcctctgctatttacagtgtggaaacaattaatgatggcaatttccac
attgtggagctgctagctatggatcagattctatctttatctattgatggaggaagcccc
aagataattaccaatttgtccaaacaatccactctgaactttgattctccgctgtatgta
ggaggcatgcctgtgaaaaacaatgtagcagctttgcgccagtcgccagggcagaacggc
actagcttccatggctgcatccgtaatctgtacatcaacagcgaactccaggacttcaga
aatgtgcccctacaagtgggaattctgccaggttgtgagccttgtcatcagaaagtttgt
gtgcatggcacatgccatgctaccagccagtcaggcttctcctgtgagtgcgaaggcggc
tggaccggaccactctgtgaccagcaaaccaacgacccctgtctcggaaataaatgtgtg
catggtacctgcttgccgatcaatgcattttcatacagttgtaaatgcctgcagggacat
gggggagtcctctgtgatgaagaggaaatgctgcttaacccctgccaatccatcaggtgt
aaacatggcaaatgtaggctttcaggacttgggaaaccatattgcgaatgcggcagcgga
tacacgggggacagttgtgataaagaaatctcttgtcgaggggaacgagtccgagattac
taccaaaagcagcaagggtatgctgcgtgccagacgaccaagaaggtatcgagactagaa
tgtaaaggcgggtgctccgccgggcagtgctgcgggcctctgcggagcaagaggcggaaa
tactccttcgagtgcaccgacgggtcgtcgtttgtggacgaggttgaaaaagtggtgaag
tgtggctgtacaaattgtccctcctaa
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integrated database retrieval system
