Pyrgilauda ruficollis (rufous-necked snowfinch): 121356828
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Entry
121356828 CDS
T07608
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121356828 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121356828 (SOX17)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121356828 (SOX17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox17_18_mid
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
121356828
NCBI-ProteinID:
XP_041329578
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MTPGVVRPRRFQECQKKLPIKRCGEVSSKHRGRLDSEAAQCCFKVTIRKNPNSQNKKLEK
EGDNLSITPGALEASQTANIFLTALKIAASFMCKQSLYSLNFFSKSPCGILSLASILLIR
AKEKFWRFNKINWLKKEFSLGIGRASVRDLFRGGWPGIEGSESRHVGSGNVTTSAIKLKP
LERQPYPAGGLTVSVGAGKSWKALSLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV
KRLKRVESGFLQHGLAEAAGPGLGSEVSGGGGGRMCVEGLGLAYGEQGYAAAGAGHYRDC
PPLGAAAFDGYGLPTPDPSPLDAAESEASFFAAGLQEECALVPYGYGPHPAAAEYPAAAS
ESPSGASLRRHLPPGEALGAGGSLQGLLGCPAPLHAYYGQCQPPGAGRGPPPPSGAVGQP
SPPPETAPCREQLEQLRPEELLGEVDRTEFEQYLRFACKPELGLPYGGHDAAALSPPEVA
GPVSSAVSDASSAVYYCGYPDL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaggagtcgtgcgaccacgaaggtttcaggagtgtcagaagaagctccctatt
aaacgctgcggggaagtcagctctaagcacagagggcgactggactctgaagcagcgcaa
tgctgttttaaagttacaattcgaaaaaacccaaacagtcaaaacaaaaagctagaaaag
gagggagataatctgtctataacgccaggggcacttgaagcgtcacaaactgccaacatt
ttcttgacagccctaaaaattgctgcaagctttatgtgcaagcagtccctctactcgctg
aactttttcagtaaaagcccctgcggaattctttcgcttgcctcaattctgctaattaga
gcgaaagagaaattctggcgttttaacaagatcaactggttaaaaaaagaattttctctg
ggtatcggccgtgcgtcggtgcgtgacctgtttcggggcggctggcctgggattgagggc
tctgagtcccggcacgtcgggtcgggaaatgtcacaacctcagccataaaactaaagcca
ttagaacgccagccttacccagcgggcggtctgacggtgtcggtgggcgcaggtaaatcg
tggaaggcgctgtcgctggcggagaagcgtccgttcgtggaggaggcggagcggctgcgg
gtgcagcacatgcaggaccacccgaactacaagtaccggccgcggcggcggaagcaggtg
aagcgcctgaagcgggtggagagcggcttcctgcagcacggcctggcggaggcggcgggg
cccgggctgggcagcgaggtgtccggcggcggcggcggcaggatgtgcgtggagggcctg
ggactggcgtacggcgagcagggctacgcggcggcgggcgcgggccactaccgggactgt
ccgccgctgggcgccgccgcgttcgacggctacggcctgccgactccggacccgtcgccg
ctggacgcggcggagagcgaggcgtccttcttcgcggcggggctgcaggaggagtgcgcg
ctggtgccctacggctacggcccgcacccggcggccgccgagtacccggcagcggcgtcc
gagagcccgtcgggcgcgtcgctgcggcggcacctgccgcccggggaggcgctgggcgcg
ggcgggtcgctgcaggggctgctgggctgcccggcgccgctgcacgcctactacgggcag
tgccagccgccgggagcggggcgcgggccgccgccgccgtcgggggccgtggggcagccg
tcgccgccgcccgagacggcgccgtgccgggagcagctggagcagctgcggccggaggag
ctgctgggcgaggtggaccgcacggagttcgagcagtacctgcgcttcgcctgcaagccc
gagctggggctgccctacggcggccacgacgcggccgcgctgtcgccgcccgaggtcgcg
ggtcccgtctcgtcggccgtgtcggacgccagcagcgccgtctactactgcggctacccc
gacttgtga
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integrated database retrieval system
