Pyrgilauda ruficollis (rufous-necked snowfinch): 121356829
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Entry
121356829 CDS
T07608
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121356829 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pruf01009
]
121356829 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121356829 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
pruf03029
]
121356829 (RB1CC1)
Protein phosphatases and associated proteins [BR:
pruf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121356829 (RB1CC1)
Membrane trafficking [BR:
pruf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121356829 (RB1CC1)
Mitochondrial biogenesis [BR:
pruf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121356829 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
121356829
NCBI-ProteinID:
XP_041329579
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEHGGAESEETEDGKSP
ELVLYPDVSKVNSKSMLASFCKSVEHSALEGTDPENVKDDKESGQNATVQDNEMSVELKN
DDQPSFNVSLLDWINGQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASLSVCVEKCRVIAQDSKVHLKGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYETKINKLLEDGEENKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRLSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENEHRLEQMQESHEVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQVDKETESLRKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELINRYEEESNLLRTELNKVTLLHQKTAEAEKRLSEQITELQSKLELEMTALEKEKT
ENLSLCEQQEKYEAIIHKLKEEQELLISNQEQDRQLLIQKLNCEKEDAVQTACKELELQR
EAAEKGLLEKIMQLEMQVNQSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVSKLRSSNFSPSTYLAAASEACGACAADVPTDTERLVADFGAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRERPPSPNLIKISAFNENTSNILVPITAYSKYCIHFSLASGASRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
caacaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccatcatggccaacttggaagattgt
acatactcttaccaaaagctgcttttcaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgaacatggaggagcagaaagtgaagaaactgaggatgggaaatctcct
gaattggtgctttatcctgatgtatctaaagtgaacagtaaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtaaaagatgat
aaggaatctggtcaaaatgctactgtccaggacaatgaaatgtcggtagaattgaaaaat
gatgatcagccttccttcaatgtgtctttgttagactggataaatggtcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgtagcagactggtgaatgaacagaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtaacagag
cttctagaaagggtcaaagttgtcgaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaagttgtgaggagaaaaatgttcataaaacactacagggagtgggcgggt
gctttgataaaagatgggaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcctttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcg
ttgagcgacttgcaatttttgcagtctttctgtccttcagaagttcagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaactattacagacctgctgaatgaa
caaaaggcctccaatagtcaagcatcgccacaatctgctaccacaccaaggatggaaagt
actacaggaaccgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattagaagaattgtccccggacagcatt
gatgctcacacattcgattttgaaactattgcccatccgaacttggagcaagctcttaag
caaggatcattagacttggattcattggcagagagtcccgaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatccagtgtctcctaatgtaataagtgacccacaa
agcccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtagg
cgtatgcaagatacaagttcttgtgtaaaggatgtttctgtagaaaatgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaaggtacatttaaaaggtata
aaagaagatctttgccatttcagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacaattgaaaaggtaaagctttcactt
gaaaaaacactaaatgataaacatcaaaatgaattacagtctttgaaaagtgagtatgaa
actaaaattaataaattattggaggatggtgaagaaaataaaaagaaaatcaaaaagtta
aaaggtgacctgttaggtcttgaggaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaaattctgaaatcaaggaactgaggctgtcacgt
gaaattgtacttgaagacttgaaaaaacttcatgttgaaaacaacgagaaactgcaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtcctagctgagcacaaggactgtttggat
aaattgaaaaaagagaacgagcatagacttgaacaaatgcaggagtctcatgaggtagtt
atgcaagagaaacaacaacaagtagaagagctacaactcaaggtttcagatctgtctgat
ttgaggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatctcaggttgacaag
gaaactgaaagcttaagaaaggaaatagataaattaaacaataaaatacaaatcagcagt
gatgaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctaataaataggtatgaagaagaatcaaatttgcttagaactgaatta
aataaagtaacgcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaa
ataacagaactgcaaagtaagttagagttggaaatgactgccctagagaaggaaaaaaca
gaaaacttgtctctctgtgagcagcaggaaaaatatgaagctattatccataagctaaag
gaagagcaagaactattaatatctaaccaagagcaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtgcaaactgcttgtaaagagttggaattacagagg
gaagctgctgaaaaagggcttttggaaaaaataatgcaacttgagatgcaagtgaatcag
agtcctcctgctgaatcatctgctgaatcaaacttagtcgctgaacttcaggagaagctt
caggaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacatcactcactgcagagcagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagataga
gctcgcttacttgaagagaagaagaaacttgaagaagaagttagtaaactgagaagtagt
aatttttctccatcaacctacttggcagcagcatcagaagcctgtggggcctgtgcagct
gatgtgcccacagacacagagagattggttgctgactttggggctgaggggagaatggat
tccacgatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaag
cagaggataatgttgctagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccaaagtatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagagagaccaccaagccctaacttgattaaaatttctgcttttaatgaaaat
accagtaatatcctggtacctataactgcttattcaaaatactgcatacatttctcttta
gcatcgggtgcatctaggagaccgtgggtgctaggaaaagtgatggaaaaggagtattgc
caggcaaaaaaggcacaaaacagattcaaagttcctttgggtacaaaattctacagagtg
aaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
