Pyrgilauda ruficollis (rufous-necked snowfinch): 121356904
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Entry
121356904 CDS
T07608
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121356904 (CHD7)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121356904 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
121356904
NCBI-ProteinID:
XP_041329727
LinkDB
All DBs
Position
Unknown
AA seq
3013 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPTLQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHMMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHSSGAG
GQMGVYPGMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQQPQPTQPPQAPSG
PPGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHL
SHVPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSR
SQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPS
NSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRP
GSAGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSTPREMGGHM
RPNGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPH
HQPWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDYLPSIEPQ
PQQKKKKKKNNHIAAEGPSKGFGKEDFPGGLDSQNLSRNSVDCSQEDKKKKKKPKAKKEP
KDPKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKASSKKQDSEASAAKKKVNK
GKEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADA
AGRDSPSNTSQSEQQESADAEGPIVEKIMSSRLVKKKMENGEEVEVEEFYVKYKNFSYLH
CQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSRSTDDN
GEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSE
SSREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHG
PFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKF
HAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPL
QNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKN
LAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYL
INGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVR
CLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA
ADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKA
VLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHT
ITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPR
VRKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYG
WGRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTR
ALVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNK
VLLRVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIG
VFKHGYEKYNSMRADAALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEY
KPTRTPFKDEIDEFANSPPEDKEESIELHPSKHNESNAELGQLYWPNTSTLTTRLRRLIT
AYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVV
STFGVIFDPVKHQFEWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPD
LSTLIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDK
DLLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGNANTVSSVNPLGAGCSQTPP
IVPSTPVQEEKTTEPTESKVEGSENPAAKEKSEIKEETDTTDKDTKPDCDAEAEPGSVKC
ELKDIEMSTDVDPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSQGKNFDEESNASM
STARDETRDGFYIEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNR
RQMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASVSGSEDLTASPQLSKEDALNLSV
PRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATTSTS
NFSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRR
KNVEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLED
GTRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKL
DINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVP
ESMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLT
SLQNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLL
NNPITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSVNGSVSA
ATAATTATATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPAL
AGLQNAVGSNEEKATDKTEGAAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSL
DGGEEIENNENDE
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ttggaaggtcttggagaatgtggatatcctgaaaatacagtgaatcctatgggtcagcaa
atgcccatggatcaaggatttcccactttacagtcatctcttcatcatcctcctgcaaat
caaaaccaagccaagttgacccattttgatcactataatcaatacgaacagcagaaaatg
cacatgatggatcagccgaacaggatgataagcaatgcccctgggaatggtatagcgtct
cctcattcgcagtatcacaaccctccagttcctcaggttcctcacagcagtggtgctggt
ggtcagatgggagtctatcccggcatgcagaacgaaagacacggccagcccttcgtagac
agtggctccatgtggggaccacgggcagttcaagtgccagaccagataagagcaccatac
cagcagcaacagcagcagcagcagccgcagccgacacagccgccacaggcaccctccgga
ccccctgggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggt
gatttttcaatgcagcagcacggtcagccgcagcagcagaggatgaaccagttttctcaa
ggccaagaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttg
tctcatgtgccccagcagaatcccagtatggcaccttctttgcgacactcagtccagcaa
tttcaccaccatccccctactgctctccatggggaatcagtagcccacagtcccagattc
tcccctaatcctccccagcagggtgctgttaggccgcaaacacttaattttagttctcgg
agccagacggtaccctcacctactataaacaactcagggcagtattctcgatatccttac
agtaaccttaatcagggattagttaataatacagggatgaatcagaatttaggccttaca
aataacactccaatgaatcaatctgtaccaagatacccaaatgctgtcggatttccatca
aacagtggtcaaggactaatgcaccagcagcccatccaccctagtggctcacttaaccaa
atgaacacgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctccc
atgtcacctatgaaagcaatgagtaatccagcaggtacacctcctccacaggttagaccc
ggtagtgctggaataccaatggaagttggcagttacccaaatataccccatcctcagccg
tcacaccagccccctggtgccatgggaattggacaaaggaatatgggccccagaaacatg
caacagagtcgtccatttatgggtatgtcttcaacaccacgggagatgggtgggcacatg
agaccaaatggttgtccaggtgttggccttgcagatccacaagcaatacaagagcgacta
atatctggccagcagcttcctagtcaacagcagtcttttcaacagcaaatgccaacctgt
cctcccatgcagcctcatccagggatacatcaccaatcttcaccacccccgcatcctcat
caccagccttgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtc
cttcagcattctccatcggaaccctttttagagaaaccagtgccggatatgactcaggtt
agtggaccgaatacccagctagtgaaaagcgatgattatctgccgtcaattgagccgcag
ccacagcaaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaa
ggttttggtaaggaagactttcctgggggacttgacagccagaatctaagcagaaactca
gtggattgctcccaagaagacaagaagaaaaagaaaaagcccaaggcaaaaaaagaaccg
aaggatcctaaagaacccaaggaaaagaaggaacccaagacccccaaagtccctaagacc
cctaaagagccaaaggaaaagaaagcaaaaaataccacgccaaaacccaagaccagcaaa
aaggctagtagcaagaagcaagattcagaagccagtgctgcgaagaaaaaggttaacaag
ggaaaggaaggttctgaaaactcagatttggaaaaaactccaccaccatcacctcatcct
gaagatgaagatgatccaggggttcagaaacgacgctccagcaggcaggtgaagaggaag
cgttatactgaagacctggagttcaagatttcagatgaggaggctgatgatgctgatgct
gctggaagagactctccttcaaatacttctcagtcagagcaacaggaatctgctgatgct
gaaggtcctattgtggagaaaatcatgagtagccgtttagtcaagaaaaagatggagaac
ggagaggaagtagaagtagaggaattctatgtaaagtacaaaaacttttcttaccttcac
tgtcagtgggcatctgtagaagagctggacaaagacaagagaattcagcagaagattaag
cggtttaaggcaaaacagggccagaataaattcctttctgaaattgatgatgagcttttt
aatccagattatgtggaagttgatcgaatcatggatttttcacgtagcacagatgataat
ggagagcctgtaacgcattatctggtgaagtggtgttcgcttccttatgaagacagcact
tgggagctcaagcaagacatcgaccaagccaagatcgaagaatttgagaaactgatgtct
agggagccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggag
agttccagggagtataaaaacaataacaaactcagggaataccagttggagggagtaaac
tggcttcttttcaattggtacaacacacgaaactgcattttagcagatgaaatggggttg
ggaaagactatccagtccattacgtttctctatgagatatatttgaaaggaatccatggt
cctttcttggttattgcaccattgtccacaattcccaactgggaaagggagttccgcacc
tggacagagttgaatgtggttgtgtatcatgggagtcaagcgagtcggcggaccattcag
ttgtatgaaatgtatttcaaagatccacagggtcgtgtgataaaggggtcctacaagttc
cacgccattatcacaacatttgaaatgatcttgactgactgcccagagctgcgtaacatt
ccatggcgttgcgtggtcattgatgaggcccacaggctgaaaaacaggaactgtaagctt
ttggaaggactcaagatgatggatctggagcataaagtgctgcttactggaacccctttg
caaaatacagtagaagagctgtttagcttgcttcacttcttggaaccaggtcgctttcca
tcagaaaccacattcatgcaagaatttggggatcttaaaactgaagagcaggtgcaaaaa
ctgcaagctattttgaagccgatgatgctgagacgtctcaaggaggatgtggaaaagaac
ctggcccccaaagaggaaaccatcattgaagttgagctgacaaatattcagaagaaatac
tatcgtgctattcttgaaaagaatttcacatttctttccaagggtggaggtcaggcaaat
gtacctaatcttttaaacactatgatggaactaagaaaatgctgcaatcatccatacctt
attaatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactct
ccagattttcagctccaggcaatgatccaggctgctggcaagctcgtactgattgacaag
ctgctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgc
tgcttggacatactggaagactacctcattcaaagacggtacccatacgaacgaattgat
ggtcgagtgagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattct
gataggtttgttttcctgctgtgtacaagggcaggaggtttgggcattaatcttactgct
gctgatacctgcatcatttttgattcagactggaatccccaaaatgacctccaggctcaa
gcacgatgtcacagaatagggcagagcaaatcagtgaaaatttacaggttgataacaagg
aattcttacgaaagggaaatgtttgacaaagctagcctgaagctgggccttgataaggct
gtgctacaatctatgagtggaagagaaaatgccacaaatggggtgcaacagctgtctaaa
aaagaaatagaagatcttcttcgaaagggggcatatggtgctctgatggatgaggaagat
gaagggtctaagttttgtgaagaggatatcgatcagattctcttaaggcgaacacacaca
attactattgaatctgaaggaaaaggctcaacatttgcaaaggctagttttgttgcatct
gggaacaggacagatatttctttggatgatcctaatttctggcaaaagtgggcaaagaaa
gctgagctggatattgatgctctaaatggaaggaacaacctagttattgatacaccaaga
gtaaggaagcaaaccagactctacagtgcagtcaaagaggatgagctgatggagttttca
gacctggaaagcgattctgaggaaaagcctagcacaaagccccgtaggcctcaggacaaa
tcacaaggttatgcaagaagtgaatgtttcagggtggagaagaacttgttggtttatggc
tggggtcggtggactgacatcctctcacatgggcgctataaacgtcagctaacagagcaa
gatgtggaaaccatctgccggactatcctggtgtattgtcttaatcattacaaaggggat
gaaaatatcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgg
gctttggttaatcattccggtctgtctgcaccagtgcccagagggaggaaagggaagaaa
gtaaaagcccagagttcacagccaatgctgcaagatgctgattggctcacaacctgtaat
ccagatgtattatttcaagaagacagctataggaaacatcttaaacatcactgtaataag
gtcctgctgcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagca
gacaagatcttagagggtgctgactcaagtgaagtagatgtatggatacctgagccattc
catgctgaagttcctgcagactggtgggataaggaggcagataaatcccttttaattgga
gtatttaaacacggttatgagaagtacaattctatgagagctgatgcagcactgtgcttt
ctggaacgggttggcatgcctgatgcaaaggccatagctgctgaacagagagggacagac
atgttagcagatggtggtgatgggggtgaatttgacagagaggatgaagatccagaatat
aagccaaccagaactcccttcaaggatgaaattgatgaattcgcaaactcacctccagaa
gataaagaggagtccatagaattacacccaagcaagcacaatgaaagcaatgctgagtta
gggcagctctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattact
gcctatcagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgac
cgcaggagacgacggcctcgagaagaagtgagggcactggaggcagaaagggaagctata
ataactgagaaacgacaaaaatggacaagaagagaagaagctgatttttatcgtgtggtg
tctacttttggagttatttttgatcctgtaaaacatcagtttgagtggaatcaattcaga
gcatttgccaggcttgacaaaaagtccgatgaaagcttggaaaagtattttaatggcttt
gtgaatatgtgcagacgagtgtgccgaatgccagtgaaaccagatgatgaacctcctgat
ctttccacgctgattgagccgatcacagaggagcgcgcttctagaactttatatcgcatc
gagctgctgcgcaagatccgcgaacaggttctccatcacccgcagctgggggagaggcta
aagctttgccagccaagtctggacctgccagagtggtgggagtgtggtaaacatgataaa
gacttactgattggtgctgctaaacatggagtcagtaggacagattatcacattctgaat
gatcctgaactctcttttcttgaggctcacaaaaactttgctcaaaacagagggacaggt
aatgcaaatactgtctcttctgtaaaccctctgggcgctggctgcagtcaaacaccccca
attgtcccatccacaccagtacaagaagaaaagactacagaaccaacagagtctaaagtt
gaagggtctgaaaatccagcagccaaagaaaaatctgaaatcaaagaggagacagatact
acagataaggacactaaaccagactgtgatgctgaggctgagcctggctctgttaaatgt
gaattgaaagacatagaaatgagtacagatgtagatccgaaatctatttctgagaaaggt
tcagaagaagatgaagaggagaaactggaagatgatgataaatcagaagaatcctcccaa
cctgaagcaggagcagtttctcagggtaagaattttgatgaagaaagcaatgcctctatg
agtaccgcaagggatgaaacacgcgatggattctacatagaagacggggatccctctgtg
gttcagctgcttcatgagagaacatttgccttctcattctggcctaaggaccgagtaatg
atcaaccgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaatagg
cgccagatgtttgatttccaggggctcatacctgggtacactccaacagctgtggacagc
cctctacagaaaaggagctttgcagagctctccatggttggtcaagccagcgtcagtggc
agcgaagatctcactgcttctcctcagttatcaaaggaagatgcactcaatttatcagtt
ccacgtcagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgccaag
aggagaaatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaat
ggacaagaaaaggttgtagatttatcaaaggcctcacgagaggcaacaacttctacctca
aatttttcatctgttacttcaaagtttatcttgcctaatgtctccacacctgtgtctgat
gcctttaaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcat
ctactgaatggctctttaatagatggagaaccacccatgaagaggaggagaggaaggagg
aaaaatgtagaagggcttgatctgttatttatgagcaacaaacggacatcattgactgta
gaggatgcagaagtgaccaaagcttttgaagaagatatggaagccctaccagcaaggaac
attccatctcctggtcaattagacccagacactcgcatccctgtaatcaatctagaggat
gggaccaggctggtgggagaggatgccccgaaaaacaaggatctagttgaatggcttaag
ttgcatcctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctg
ttttccccatttcagaagccgaaacaaaaacgacacagatgtcgaaaccctaataaactg
gatataaacaccttgacaggagaagaaagggtacctgttgtaaataaacgaaatggaaag
aagatgggtggagctatggcccctccaatgaaggacttgccaagatggctggaagaaaat
cctgagtttgctgttgctccggattggactgacattgttaaacagtctggtttcgttcca
gagtccatgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcaga
agaggaagaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagca
tcaacttcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcaca
agcctccagaacctacagaacctgcagtctctccagctcgcgggcctcatgggctttcca
ccagggctagcaacagctgctgctgctgggggggacgctaaaaatccggctgccatgttg
cctctgatgttgccagggatggcaggactgcccaatatgtttggactaagcggattgttg
aataacccgatcacggctactactggaaatgccactactgcttccggtcaaggagagact
gaggatggcgcttcaaaagctgaagagaagaaaaatgagaatgaagaggagaacaaagac
tctgagaaaagcacagacactgtttctgctactgactctgtgaatggatctgtcagtgct
gctactgcggcgactaccgccactgccaccactaccaccaccaccaacactggattgccc
acaaaccctctggccttcaatcctttcctgctgtctaccatggctcctggcctcttctat
ccatctatgtttctacctccaggactgggaggattgactctgcccggtttcccagcacta
gcaggacttcagaatgcagtgggctccaatgaagagaaggctactgacaaaactgaagga
gctgcctttaaagatgaagaaaatctcgaaggcagtgatgcagaggagagccttgataaa
actgcagattcctccgttttagaagatgaaatagcacagggtgaagaattagactcactt
gatgggggggaagaaatagaaaacaatgaaaacgatgaataa
DBGET
integrated database retrieval system
