Pyrgilauda ruficollis (rufous-necked snowfinch): 121356938
Help
Entry
121356938 CDS
T07608
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04140
Autophagy - animal
pruf04148
Efferocytosis
pruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121356938 (VPS16)
04148 Efferocytosis
121356938 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121356938 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121356938 (VPS16)
Membrane trafficking [BR:
pruf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121356938 (VPS16)
Hops complex
121356938 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
121356938
NCBI-ProteinID:
XP_041329771
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MDCYTANWNPLGEETFYRKLELYSMEWGLREDLRDCVLAAAPYGGPIALLRNSRRDKTPS
TRPLLEIYSASGLLLASVPWKSGHLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSM
GNEVLQNHVLEAQVFHTEFGTGVAILTGALRFSLATNIEDLKLRRLPEVPGLQKPPPCWT
VLAQDRVTMVLLAMGQELFLLDNTSCSVLTPPGLSPSAGPFLRVAVSFTHRHLALFCDCG
TVWMGTASLKEKFCEFNTGIRSPPKQMVWCTRPRSRQRAVVLAWERQLMVVGNSSECIRF
VLDEDSYLVPELDGVRILSRSSHEFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQ
KADEYLREIREQQLLPEAVGQCIEAAGYEHEPDTQKSLLRAASFGKCFLDKFPPEGFVRM
CQDLRVLNAIRDYQIGIPLTFTQYKQLTIEVLLDRLVLRRLYPLAIRICEFLRLPEMQGV
SRILAHWACYKVQQKDKSDEEVAQAINQKLGDTAGISYSDIATRAYDCGRAELAIKLLEY
EPRSGEQVPLLLKMKRSKLALGKAIESGDTDLVYTVVLHLKNELNRGSFFMTLQNQPVAL
SLYRQFCRHQERETLKDLYNQDDNHQELGNLHVLGGYCQKRIEGRVAALQNALDEFYKAK
NDFAAKATEEQIKLLRLQRHLQEELDKPYLDLSLHDTVATLILDGHHKRAEQLYRDFRIP
DKRYWWLKINALATRGDWEEMEKFSKSKKSPIGYLPFVEVAVKHHNRYEAKKYAPRVPPE
QRVKAFVLVGDLEQAAEAAMERRSEAEMSLVLARCCPGTDSALADRLTRARAQLLKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggattgttacacggccaactggaacccgctgggcgaggagaccttctaccggaagctg
gagctctactccatggaatgggggctgcgggaggacctgcgtgactgtgtgctggcagct
gccccctacgggggtcccatagctctgctgaggaattcccggcgggacaagacccccagc
acccgccctctcctggagatctactcggcctcagggctgctcctggccagtgtcccgtgg
aagagcggccacctggtgcacctgggctggacagcaggggaggacctgctgtgcatccag
gaggatgggactgtcctggtctacaacctcttctgcgagttcaagcggcacttcagcatg
ggaaacgaggtgctgcagaaccacgtgctggaggcgcaggttttccacacggagttcggg
acgggcgtggccatcctgacgggagcgctgcgcttctccctggccaccaacatcgaggac
ctcaagctgcgccgcctgcccgaggtccctgggctgcagaagcccccgccgtgctggacc
gtgctggcccaggacagggtgaccatggtgctgctggccatgggacaggagctcttcctg
ctggacaacacctcctgctccgtgctgacgccccccgggctgagcccctcggcggggcca
ttcctgcgcgtggccgtgtccttcacccaccggcacctggcgctcttctgcgactgcggc
accgtctggatgggaacggcctcgctcaaggagaaattctgcgagttcaacaccggcatc
cgatccccgcccaagcagatggtttggtgcacgcggccccgcagccggcagcgagccgtg
gtgctggcctgggagcggcagctgatggtggtgggcaactcctcggagtgcatccgcttt
gtcctggatgaggattcctacctggtgcccgagctggacggggtccggatcctgtcccgc
agctcccacgagttcctgcacgagatcccagaggccagccaggagattttccgcatcgcc
tccatggctccgggcgctctgctgctggaggcgcagaaggagtacgagaaggagagccag
aaagccgacgagtacctgcgggagatccgggagcagcagctgctccccgaggccgtgggc
cagtgcatcgaggccgcgggctacgagcacgagcccgacacccagaaatccctgctgagg
gcagcttcctttgggaagtgtttcctggataagttccccccggaggggttcgtgcgcatg
tgccaggacctgcgggtcctcaacgccatccgggactaccagatcgggatcccgctcacc
ttcacgcaatacaagcagctcaccatcgaggtgctgctggacaggctggtcctgcgccgc
ctgtacccgctggccatccgcatctgcgagttcctgcgcctgccggagatgcagggcgtc
agccgcatcctggcacactgggcctgctacaaggtgcagcagaaggacaagtcggacgag
gaggtggcccaggccatcaaccagaagcttggggacacggcgggcatctcctactcggac
atcgccacgcgcgcctacgactgcggccgcgccgagctggccatcaagctgctggagtac
gagccccggagcggggagcaggtgccgctgctgctgaagatgaaacggagcaaactggcc
ctgggcaaagccatcgagagcggggacaccgacctggtgtacacggttgtgctgcacctc
aagaacgagctcaaccgcggctccttcttcatgaccctgcagaaccagcccgtggccctg
agcctgtaccgccagttctgccggcaccaggagcgggagacgctgaaggatttgtacaac
caggacgacaaccaccaggagctgggcaacctgcacgtgctggggggctactgccagaag
cggatcgagggccgcgtggccgccctgcagaacgccctggacgagttctacaaggccaag
aacgacttcgctgccaaggccacggaggagcagatcaagctgctgcggctgcagcggcac
ctgcaggaggagctggacaagccctacctggacctgtccctgcacgacaccgtggccacc
ctcatcctggacgggcaccacaagcgcgccgagcagctctaccgggacttcaggatccct
gacaagaggtactggtggctgaagatcaacgccctggccacccgcggggactgggaggag
atggagaagttctccaagagcaagaagtcgcccattgggtacctgcccttcgtggaggtg
gcggtgaagcaccacaaccgctacgaggccaagaaatacgcgccccgcgtgccgcccgag
cagcgcgtcaaggccttcgtcctcgtgggggacctggagcaggcggccgaggcggccatg
gagcgcaggagcgaggccgagatgagcctggtgctggctcggtgctgccccggcaccgac
agcgccctggccgacaggctcacccgggcacgggcacagctcctcaaaaagtga
DBGET
integrated database retrieval system
