Pyrgilauda ruficollis (rufous-necked snowfinch): 121357009
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Entry
121357009 CDS
T07608
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04517
IgSF CAM signaling
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121357009 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121357009 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pruf04812
]
121357009 (SPTBN1)
Cytoskeleton proteins [BR:
pruf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121357009 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
121357009 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
121357009
NCBI-ProteinID:
XP_041329862
LinkDB
All DBs
Position
Unknown
AA seq
2302 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVAKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTVAETAETNEMVNGAAEQRTSS
KESSPIPSPTSDRKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
6909 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacggtagcgacagattacgacaacattgaaatccaacagcagtacagcgac
gtcaacaaccgctgggatgtcgacgactgggacaatgagaacagttctgctcggctcttt
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcagttgcgaagaagaccttc
accaagtgggtgaattcccacttggctcgtgtgtcctgccgaattacagacctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaggagcaacgagtgcacctagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggaccattatcctgagattccagatccaa
gatatcagcgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaacgtcaatatccacaactttacaaca
agctggagggatgggatggcgttcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaggctttggctgtcgaaggaaaacgtatcggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaattcgccaactccctggttggggtgcagcagcag
ctgcaggcattcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacatcgcggcgtacgaggagcgggttcaggcc
gtggtggcggtggcgaaggagctcgagactgaaaactaccacgacatcaaacgcatcact
gcaaggaaggacaatgtcatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcggctggagatgaaccttgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggacgagatgaaggtgcttttgctgtcccaagactacggcaaacatttg
ttgggagttgaggacctgctgcagaaacatgctctggtggaagctgacatcgctattcag
gctgagagagtaagaggggtcaatgcctctgctcagaagtttgccactgatggagaaggt
tacaagccctgtgacccgcaggtgatcagggaccgcgtggctcacatggagttctgctac
caggagctctgccagctcgcggccgagcgccgtgcgcgccttgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggagcagatc
ctgtcatctgatgactatgggaaggacctaaccagtgttgtccgactcttgagtaaacac
aaggcgtttgaggatgagatgagtggccgcagtggccactttcagcaggcgataaaagaa
ggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaagcggctg
gaggaagcctctctccttcaccagttccaggctgatgctgatgatattgacgcgtggatg
ttggacatcctcaagattgtctccagtaatgatgttggccatgatgaatattccactcag
tccttggtcaagaaacacaaagatgtggctgaagagattgcgagctaccggccgaccatc
gactctcttcacgagcaggccaaggccctgccgcaggagcacgcggagtctccagatgtg
caaggcaggttgtccggaatcgaggagagatacaaagaggttgctgagctgacccggctg
cgtaaacaggccctgcaggataccctcgctctctataagatgttcagtgaggcagatgct
tgtgagctttggatcgacgaaaaggagaaatggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcatcccgtgtggccgtggtgaaccagattgccaggcagctgatgcacagtggccac
cccggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttccga
gaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactaccat
cttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgattgagtccaca
caagatctgggtaacgacctggctggagtgatggccttgcagaggaagctgacgggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcaaaaggaggcagagaaa
ctggaatcagagcatcctgaccaggcacaagccatcctttcacggcttgcagagatcaat
gacgtgtgggaagaaatgaagaccaccctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaattgcctccgaagatatgcccaacaccctgacagaggctgagaagctgctc
actcagcacgagaatatcaagaatgaaatcaacaactacgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaagggcaaactgacgctcagtacatgttcctacgc
cagcgcctacaggctttggacaccggatggaatgagcttcacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaagca
gaagctttccttaataaccaggagtatgttctggcacacacagagatgccaaccaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgccaat
gaagaaaagatcaatgcagttgtggagacgggcaggaggcttgttagtgatgggaacatt
aactctgataaaatccaggagaaggtggactcaattgatgacagacataggaagaaccgt
gaagcagccagtgaacttttgatgagactgaaagataacagggatctccaaaagtttctt
caggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcttatgatgaggcgaggaacctacacagcaagtggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggagggaatgcagctcatt
gcagagaaaccagagactgaggccgtggtgaaggagaagctgacaggtctccaccaaatg
tgggacgagcttgaatccaccacccagaccaaggctcagcgtctcttcgatgcaaacaag
gcagagcttttcacccagagctgtgcagacctggataagtggctgaatggtttggagagc
caaatccagtcggatgactacggaaaagatctcaccagtgtcaacatcctgttgaagaag
caacagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaaagc
caggcaagggctttgagccaagagggcaagagcacagatgaagttgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctggagcctttgaatgagagaaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtc
ggagagaggatgcccatagctacatctactgatcatggacacaatctccagactgtgcag
ctactaataaagaaaaatcagacccttcagaaagaaatccagggccaccagcctcgtatc
gatgacatttttgagagaagtcagaacatcatcacagagagcagccccaatgctgaagtc
attcagcagagacttgcagacttgaagcagctgtggaacctcctcatcgaggagacagag
aagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgcagcc
gaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagcagtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctatgcaggc
ctgaaggaccttgcagaggagaggaggggcaagctggacgagaggcaccggcttttccag
ctcaaccgcgaggtggatgacctggagcagtggattgccgagagggaggtggtggcaggg
tcccacgagctgggccaggactacgagcacgtcacgatgctgcaggagcggttccgggag
ttcgcccgggacaccgggaacatcgggcaggagcgggtggacactgtcaaccacatggct
gatgagctcatcaactccggccactcggacgctgccacgatcgccgagtggaaggacgga
ctcaatgaggcctgggcggatctcctggagctcattgacacgagaacacaaatccttgca
gcctcttatgaactgcacaaattttaccacgatgccaaggagatcttaggacgtatccaa
gacaaacataagaaactgcccgaggagcttggtagagaccaaaacacagtggaaacacta
cagagaatgcacacgacgtttgagcacgatatccaggccctgggcacccaggtgcgacag
ctgcaggaggatgcagcgcgcctccaggctgcctacgccggggacaaggctgatgacatc
cagaagagggaaaacgaggtcctagaggcatggaaggcactgctggatgcctgtgaaggc
cgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgggat
ctcatgctctggatggaagatgttatccggcagatagaagcccaggaaaagccaagggat
gtttcatctgtggaactgctcatgaacaatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacgtgtattgagcttggcaagtctctgctggccaggaaacat
tatgcatctgaggagatcaaggaaaagctcctgcagctgacagaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccagttc
tccagagatgcaagcgtggctgaggcctggctgctgggacaggagccctacctgtccagc
cgtgaaatagggcagagcgttgatgaggtggagaaattaatcaagcggcacgaagcgttt
gagaaatccgcagctacctgggacgagaggtttgcagcactggagagactgaccacggtg
gcagaaactgcagaaaccaacgaaatggtcaatggagctgcagaacagaggacgagttcc
aaagagtccagccccattccttccccgacgtcagaccgcaaagccaagagcggcgttcag
gcccagactgctgcaaccctcccagccaaaacgcaggagatcccctcagcccagatggag
ggcttcttacaccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtca
tggcataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcaaaa
gctgctgcttctggcatcccttaccacaacgagatccctgtcagtttgaaggacgcagtc
tgcgaagtagcagtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgat
ggcaacgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggcc
atcacatcagcgatctcttcggacaaaatcgaagtgtccccgaccacccagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccct
ggcaagagggagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
DBGET
integrated database retrieval system
