Pyrgilauda ruficollis (rufous-necked snowfinch): 121357182
Help
Entry
121357182 CDS
T07608
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pruf03037
]
121357182 (CFAP54)
Cilium and associated proteins [BR:
pruf03037
]
Motile cilia and associated proteins
Sperm associated proteins
121357182 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
121357182
NCBI-ProteinID:
XP_041330192
LinkDB
All DBs
Position
Unknown
AA seq
3092 aa
AA seq
DB search
MAQPAGPPPPAAGPQAPHAAFFGPVARGNPVVDSFETELRRVLSSLRRLRGAGEAKPPQH
DLHRHGANTLFDIWIKYKPRLPEWYYNERLVEVGDTLAQIKEYKLAVLQCYERYLQQFVS
LNLDDVMDDVQHFKSAFFPNGVRDKNAALTNLPVCLFEFIFAATIHIYTICRHLMVMGHS
AKVLEYLLWASICMESSIPLLSVHYLTWRATLYTAVSQCYFDCQAGIHGEVFARRGLIKI
DELKQLEDISSSLERTETEKIFREATVKMSVMIFRRAVYESRRKSNNVRRESKVNPRKAV
NLSWPRTATERLLVAMFDGAAAQFLAILEALSDRSRNLLPPHPPVSEEMHIRDVTSELFS
AGLEILSGGESNGTNHFGIINPSSTLLQLMLTGEKGVSGEAAVKFVKLAFSYEEWNVFYS
AFEFVDNFLQAQDDPAWKKAEIELKLLTLMQPIVFPGKFERSFSIRDGGNSKEGSTRQGS
EKTQTIRKESLKAGDPFHDLMILATTAFSCVSTFEQNVHPDKEILVGVVMCLWQKCKKEL
QQIQMSGSHCLEYIHKHQAYQWVHVLWIMNEIIKKSNIADTNVMFAEITLCLAAILENVA
DSASESKDREGGSASLLQDESYDMPEILMKTPTEQLQIAYEILEKAIDDMNTSRLMTLLP
DGKSIFDSCCTKVDSNYLNLNSVLGCGDDKTGTDNGFVTDLHLELIQAQHRVAVKILKIT
QGAQVVDRSPKSSKSHEKIIEDFQYLSEELIMKKIKRNKLSRAIFLMQKAAQKFPEDLST
TSQRQLLEEALTLIEQVEAEQSALYHSLKEAMSSKKKSRTPPPPLLLSRSHCSMTFKPAP
FDSDIQVSWYCILGCVAGGSNTKVRLNNNKLQNSGEQIPADGKILLEVQGLDANEKYIFA
VAAYSSDGKLIGDAIGQMTKPILAYPSLSATTVRAYLTQVAYQTGNFKLARAAFSPMWDY
FVSDSSALPPNAAVMSASSNLTISEKRLHFEAVSQTSPITLHLFLRNIFAVSDISVMEGA
LFCDSICSNEILYKEQVARLAECERMTVAIELSNWLNDPSYALQSVVQCYGLLAPLIYHK
IFLVPVVQILIKCLAVLQEIPSAALQRREEGCYESIQHMIACASYHTAKVLHSWKEYELS
AIIINYGKKLLILPGVSPGQSGDVKTEKTHTGKERRSSRASHLAAMAKAAENLNSLESSL
FKLTEPGPGKQLTGKESPLLLYPVISCWTSESAYREVLKFRGQRRFLEFFVQLLRRVLNE
EKFECVLEWAESVENNLKRRNDTFLGADGISTQVKSLTLGESTSAAGVQKGKNTPPSKQP
KASPSNKPTKNAVPKTGPLREYFMKNPDVMNSPETQKKIRDKLTKLAHQTLVMLLSKYVT
RSQFCQLCLEEMPWKSQMNIYLAVAHYHLFKKILEEQYNIGISASQHLDSYNILDPEIFS
LNNSGTVLAREAADDNLGKPTAPLLTKSEETETQTFTSKSPKTRNKQSRGPRSRTAKTEK
QDQFPSNTLLLKHFTSIFLHLKRAMVLAHRGGHWTLLQNACRELWNYTQECQLIASQSHS
HVDAFPITSDFLCNTIWLPFYFASDMIIDMIIDLQASSSLKIVDPEGDFCIPSCLGGIVD
ENGGSSLHPQPPMDDVNVVDLRWICNLFLKTIELLYQMKKWEALVHIAVQFNIFTHERFT
EQVSPLLVYAQRQLLERIQQFGGSDSHESHFTKYLSDDAQKMRCRNYIGYKLQLPVARSA
SEGVFHGCFFNLPTNNDSTDHNQAKALVCVPLDVNDTLKCFKETLEKSKYESRALRHSRK
LLSLFLAHTQENTGRAISSHISSSRKLKFNVVDEVIFLPTPCDLSQEKYNFSSAVESRPI
PKSHLSVIISSYEQTIGILEMSNQRDLKVQALHELGNLHFYIGNKRAAFKYWCQSLDETL
DIADALNTWQELSFPKDATDCFAVGRSNDVSQKFLSQAGAWGCLHAAVLVAKIAQYITTS
KMSLRTKYCYFSATLFKTLFRASLPHPASDYDFAQYETNILIPGIDLFSDRYRADISTVV
ASLNFIMFELHCAKQNLIILPLFTLYQYIVSEICKDPAKCIEGRILKIKVLTDIGFFTEA
FHELSLLILGEKIPWKIPAGYRYTEQMQPSQKFDSSKSVMTDTNLKVLEDTFNWSLSLTV
APLCNQQIMNKLTLAKMHLIICLSATINNIPEKVEKNLYSVDNNSLPEPSKTTASNLKAD
ADQDSRQQEQRDRTVHLVDRKDELNMAMLKGILLTEAEESLSCLIQDIQEKYDGDISRYS
VEDLEALIEAKLELGSISQQRHQSPLSVALAFSAIRLLQDAKVFCVDMAHFQEEKDEREC
LDSTMEVVSLPPQVTAQGHVNVHLWLRCRAMLVTALVTQIHGVGDMKGNDVAERRSVIKE
VILEAEAFGDVETQAEMMLQAAILDLQEKCPVADIKLLLQSIIGLLQEDTFISLPASLTL
VKSMLLLADILSRQIVEDSEHCSSAVEPFNLLVLAHEFTIKAIFDCGEPIERQGEDSTLT
CLVLPMKNIYLPHINLLALVKMKIGYTLAEKLASTAARRPLQWLHALRHLESALNLCRAA
ATKKIDMEAEILFQIGKVERQITERGNSKSSQAVETLLEAIKLSQQHGQKYELIRWSYLE
IALLYLYFAENIEDESETDNSTSSVARSSEEAMKSEVYKAQAWVAIRAASQVSEAVLASQ
LLIGMKSVKEQNMKDEVQQKIPEFASMDLCSSYRDFISVADGYNVVSETPEVSSPENKEI
TEDQSQSEVAESLVTKASQKKDTITWVLMIRYHNHMKRIYNTNLFGPGSLSARDGHLGLI
SDTGIVLRIAEMHSFFEKNLFEYSFCCLENLPEELRDAEMPLSIATDSSEMSLDVSETAS
EVSHVRVASPASVTAEDIEKTESRAACAPDKEINIQWYIPSMAKPSKDTETKVLLLYAYN
TNPIKISDITSASMFSGRLWIPLARLISVREKLSDLKEQVEILMHSSKRFSTSVRTSIRE
KNETLKISPSYKPKRSDAKVHLGDKIEEIAKRYLSEVKALLSVVPAPYAPLTEIPFDVTL
QSITNLKDMFDLANGCIITDGSLFNWIISLLH
NT seq
9279 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcccgccgggccgccgccccccgccgccgggccgcaggctccgcacgccgct
ttcttcggacccgtggcgcggggcaacccggtggtggacagcttcgagaccgagctgcgg
cgcgtcctgagctccctgcggcggctgcgaggcgcgggggaggccaagccgccgcagcac
gacctgcaccgccacggagcaaacactttgtttgacatttggatcaaatataagccacga
ctaccggagtggtattacaatgaaagacttgtggaagttggtgatacccttgctcagatc
aaagaatataagttggcagttctacagtgttatgaaagataccttcagcagttcgtttct
ctaaaccttgatgatgtcatggatgatgtgcagcactttaaatctgccttttttccaaat
ggcgttagagacaaaaatgcagcacttacgaacttacctgtttgtttatttgaatttatt
tttgcagctactatccatatttacaccatatgcagacatttgatggtgatgggtcattct
gctaaggtcctggaatacttactgtgggccagtatatgtatggagtcatccattccactc
ttatctgtgcattatttgacgtggagagccaccttatatacggcagtttctcagtgttat
tttgattgtcaagccggcattcatggagaggtatttgctcgccgtggtttgattaaaatt
gatgaactgaagcaattagaagatatcagttcttctctggaacgtacagagacagaaaag
atttttagagaggccactgtaaagatgtcagtaatgattttcaggagagcagtgtatgaa
tccagaagaaagtcaaacaatgttcgacgtgagtcaaaagttaacccgagaaaagcagta
aatctgtcatggcctcgcactgctactgagcggctgctggtggcgatgtttgatggtgct
gcagctcagttcctcgccatcctggaagcactgtctgatcgtagcaggaatctattgccc
cctcatcctcctgtttctgaagaaatgcacattcgtgatgtcacttctgagcttttttct
gcaggcctagaaatcctctcaggtggagagagcaatggcaccaatcactttggtataatt
aatccatcatctactcttctgcagttgatgctaacaggagaaaaaggggtgtctggagag
gctgctgtgaaatttgtaaaattagctttcagctatgaagagtggaacgtgttttattct
gcttttgaatttgttgataattttcttcaggctcaagatgacccagcatggaagaaagct
gaaatagaactcaaacttcttacgttgatgcaacctatagtattcccaggaaaatttgaa
cgtagtttttctattcgtgatggtggtaatagcaaagaaggcagcacacgtcaaggttct
gaaaagacacagacaattagaaaggaatccttaaaggctggagatccttttcatgatctt
atgattttggcaacaacagcattttcctgtgtctccacatttgagcagaatgtccatcct
gacaaagaaatacttgttggtgtagtaatgtgtttgtggcagaagtgtaaaaaggaactt
cagcaaatccaaatgagtggaagtcactgcttagaatatatccacaaacaccaagcttac
caatgggttcatgtactctggataatgaatgaaataattaagaagagcaacatagcagac
actaatgtaatgtttgcggagataactttatgtctagctgcaatactggaaaatgtagct
gattctgcaagtgaatctaaggacagagaaggaggaagtgcttctcttttgcaagatgaa
agctatgatatgcctgaaatactgatgaaaacacctacagaacaattacaaattgcttat
gaaattcttgaaaaagcaatagatgacatgaacacatctcggttaatgacccttttgcca
gatggaaagtcgatatttgacagctgctgtacaaaggtggactcaaattatctgaatttg
aattctgttttgggatgtggtgatgataaaactggaacagataatggttttgtaacagat
ttacacttggagctcattcaggcccaacatcgagtagctgtgaaaattcttaaaattaca
caaggtgcccaagttgttgacagaagtcctaagtctagtaagtctcatgagaagattatt
gaagatttccaatatttatcagaggaacttataatgaaaaaaattaaaaggaataagcta
tccagagcaatctttttgatgcaaaaggctgcacagaagttccctgaagatttaagtact
acttcccaaaggcagctactggaggaagcactaactttaattgagcaagttgaagctgaa
caaagtgcattgtatcacagtctcaaagaagctatgagcagcaagaaaaaaagcaggact
cctcctcctcctctgttactttctagatcacattgctccatgacatttaaaccagccccg
tttgattcagacattcaggtttcatggtactgtattttgggctgtgtagcaggaggaagt
aataccaaagtaaggttaaataacaataaacttcaaaattcaggagaacagataccagcg
gatgggaaaattctcttagaagtacaagggttagatgccaatgagaaatacatatttgcc
gtggcagcatattcttcagatggaaaacttattggggatgccattgggcaaatgactaag
ccaatccttgcctatccatccctttctgctactactgttcgagcatatctaactcaggta
gcctatcagacgggcaactttaaattagccagagcagcattttcaccaatgtgggattac
tttgtttcagattcttctgcactccctcccaatgcagctgtaatgtctgcaagtagtaat
ttgactatatctgaaaaaaggttacattttgaagctgtatctcagacttctcctattacc
ttgcacctctttttgcggaatatatttgctgtttctgatattagtgtcatggaaggagca
ctcttctgtgattccatctgttccaatgagatactttataaagagcaagtagctagatta
gcagaatgtgaaagaatgactgtggcaattgaacttagcaactggttgaacgatccaagt
tacgccctgcagtctgttgtacaatgttatggtctcctcgccccacttatttatcacaag
atttttttagtgccggtagttcagatcctcattaaatgcttggctgttctccaagaaatt
ccaagtgctgctttgcaaaggagagaggaaggatgttatgagagtattcagcatatgata
gcttgtgcttcatatcatacagcaaaggtactacattcatggaaagagtatgaactttca
gcaattatcattaactatgggaaaaaattgttgatcttaccaggagtttcacctggccag
tcaggagatgtgaaaactgaaaaaacacacactggcaaagagagacgttcctcaagggca
tcccatttagctgcaatggcaaaagcagcagaaaatctaaatagtcttgaatcaagtctc
ttcaaactgacagaaccaggtcctggaaaacagcttacaggaaaggaatctcctttgctc
ctctaccctgtaatttcatgttggacatcagagagtgcttatcgagaagtgcttaaattc
agaggccaaagacgtttccttgagttcttcgttcaacttttgcgcagagtcctgaatgaa
gagaagtttgagtgtgttctggagtgggcagagagtgtggaaaataacttgaaaaggagg
aatgacaccttcctcggtgctgatggaatttcaacacaagtaaaatctctcactctggga
gaaagcacaagtgctgcaggagttcagaaaggaaagaataccccaccttcaaagcaacca
aaggcatcaccttcaaataaaccaacaaaaaatgctgtgcctaagacaggacctctcaga
gaatattttatgaaaaatccagatgtaatgaattctccagaaacacaaaagaaaatcagg
gataagttgacgaaattagctcatcaaacgttagtgatgctgctgagtaaatacgtaact
cggagtcagttctgtcaattgtgtcttgaagagatgccctggaagtctcagatgaatatc
tatctggcagttgcacactaccacctatttaaaaagatcctggaagagcaatataacatt
ggaattagtgcttcacagcatctggacagttacaatattttggatcctgagatattctca
ttaaacaattctggcactgtactggcaagggaggctgcagatgataacttaggaaaacca
acagctcctctccttacaaagtcagaagagactgaaacccaaacctttacaagtaaatct
cctaaaaccaggaataaacagagtcgaggtcctcgaagtcgaacagcaaagactgaaaaa
caggaccagtttccatcaaatacccttttactgaagcattttacaagcatcttcttgcat
ttgaaaagagcaatggttcttgctcaccgtggtggccactggactttgcttcaaaatgct
tgtcgagagctttggaactatactcaagaatgtcaattgattgctagccagtcacattcc
catgtggatgcatttcccatcacctctgattttctttgcaataccatctggttgccattt
tattttgcatcagacatgatcattgatatgataattgacctgcaagcaagcagttctctt
aagattgtggatcccgaaggagacttttgcattcccagttgtttgggaggtattgtggat
gagaatggtggttctagtcttcatccccagcctcccatggatgatgtgaacgtggttgac
ctgagatggatatgtaatctgtttcttaaaacaatagaattgttgtatcaaatgaagaaa
tgggaagcactggtgcacatagctgtacaatttaacatatttacacatgagaggttcaca
gaacaagtgagtccactgctggtgtatgctcagaggcagctgctggagaggatacagcag
ttcggtggctcggacagccatgaatctcatttcacaaaatatctgtctgatgatgcacaa
aagatgagatgcagaaactacatagggtacaaattacagctgcctgttgctcgttctgcc
agtgaaggggtttttcatggatgctttttcaatcttccaacgaataatgattccacagat
cacaatcaagcaaaagccctagtttgtgtgcctcttgatgtgaatgatacactgaaatgt
tttaaagaaactctagaaaaatctaaatatgaaagcagagcactgagacacagcaggaaa
ctactttcattattccttgcacacacacaagaaaatactggaagagcaatcagcagtcat
atctcttcaagcagaaagctgaaatttaatgtagtagatgaagtgatatttctaccgaca
ccatgtgacctttctcaagaaaaatacaatttctccagtgcggttgaaagtagaccaata
ccaaagtcacacctttcagtaattatatcttcctatgaacaaactataggaatccttgaa
atgagtaaccagagagacctcaaggtacaggctctacatgaacttggaaatcttcacttt
tatattggaaataaaagagctgcttttaaatactggtgtcaatcccttgatgaaacactc
gacattgctgatgctcttaacacctggcaagagttaagttttccaaaagatgctacagac
tgctttgcagttggaagatcaaatgatgtgagtcagaaatttctttctcaggctggagct
tggggatgtttacatgcagcagtcctagtggctaagatagctcagtatataacaacatca
aagatgagtttaagaacaaaatactgctatttttctgcaacactttttaagaccctgttt
agagcttcccttccacatccagcatctgactatgactttgcacaatatgaaacaaatatt
cttattcctggtattgacctgttctctgatcgctacagagctgatatctctactgtagtt
gcaagtctgaatttcattatgtttgaactacattgtgcaaaacaaaatttaataatttta
cctctgttcacattataccaatatattgtatctgagatttgtaaggacccagctaaatgt
attgaaggaagaatcctcaagattaaagtacttacagatataggattttttacggaggcc
tttcatgagctgtctttgcttattttgggagagaaaattccatggaaaataccagcagga
tacagatatactgaacaaatgcagccctcacagaaatttgattcctcaaaatctgtcatg
actgatacaaatttgaaggtactggaagatacatttaattggagtctatctttaacagtg
gcgccactgtgcaaccaacaaattatgaataaattaaccttagccaaaatgcatctcatc
atttgtctttctgccacaataaataatatacctgaaaaagttgaaaaaaatttatattct
gttgacaacaacagcttgccagagccaagcaaaactacagcatcgaatctaaaagctgat
gctgatcaggattcaagacaacaggaacagagagacagaacagtgcatcttgttgaccgt
aaagatgaattaaatatggccatgctgaaggggattttattgacagaagctgaagaaagt
cttagctgtcttatacaggacatacaggaaaaatatgatggggacatatctcggtattct
gtggaagatttagaggctcttattgaggccaaacttgaacttggttctatttctcagcaa
aggcatcaatcacctctcagtgttgctttggctttctctgcaattcgacttctccaagat
gcaaaagttttttgcgtggatatggcacatttccaagaagaaaaggatgaaagggagtgt
ttggactccaccatggaagttgtttcactccctccccaagtaacagcccaagggcacgtg
aatgtacatttgtggctgaggtgtcgagcaatgttagtgactgcacttgtgacacagata
catggtgttggtgacatgaaaggaaatgatgtagctgagcgcagaagtgtgataaaagaa
gtaatattagaggcagaagcctttggtgatgttgagactcaggctgaaatgatgctgcaa
gctgctattcttgacctgcaagaaaaatgtcccgtggcagacattaaacttcttttgcag
agtatcatcggtttactccaagaggatacatttatttccctgccagcttctttgactctt
gtgaaaagcatgcttctgctggcagacatactgtcacggcaaatagtagaggactcagaa
cattgctcttctgcagtggaaccattcaacttgcttgttttggcacacgagtttaccatt
aaagcaatttttgattgtggtgaacccattgaaaggcaaggagaagacagcacattgact
tgcctggtcttacccatgaagaatatctacctgccacatattaacttgctagccctagtc
aaaatgaaaattggatacacattagctgaaaaattagcttctacagctgcaagacgtccc
ttgcaatggctacatgctctcaggcatttagaatcagcattgaatctttgcagagcagct
gcaacaaaaaaaatagatatggaagctgaaattctttttcagataggtaaggtagaacgc
cagataactgaaagaggcaatagcaagtcatctcaagctgttgaaaccctgttggaagct
attaagctcagccagcaacatggtcaaaaatatgagttaatcagatggtcgtaccttgaa
atagcactattatatttatattttgctgaaaatattgaggatgaatcagaaacggataat
tcaacctcttctgtagctcgttcctctgaggaggctatgaaatcagaagtctacaaagca
caagcctgggttgcaataagagcagcttcacaggtcagtgaagctgtgcttgcttctcag
ctgttaattggaatgaagagtgttaaagaacagaacatgaaggatgaagtgcaacaaaaa
atcccagaatttgcttctatggatctttgttcttcctacagagatttcatatctgttgca
gatggatacaatgttgtctctgaaactcccgaagtatcctctcctgaaaacaaggaaatc
acagaagaccagagtcaaagtgaagtagcagaaagtcttgtcaccaaggccagccagaag
aaagatacaataacatgggttctcatgattcgctaccacaatcatatgaaaagaatttat
aacacaaacttatttggacctggatcactttctgcaagagatggacaccttggtttgatt
tctgacacaggaattgttctacgcatagcagaaatgcattccttctttgaaaagaatttg
tttgaatattcattctgttgtcttgagaatcttccagaagaactacgtgatgcagaaatg
ccactcagtattgcaactgattcttcagagatgtctcttgatgtttctgaaactgcatca
gaagtgtcacatgtgagagtagcttctccagcttctgtcaccgcagaagacattgagaag
acagagagtagggcagcatgtgctccagataaggaaattaacattcagtggtatattcct
tctatggcaaagccatcaaaggatacagaaactaaggttttgttgctttatgcttataat
acaaaccctatcaagattagtgacatcacttcagcgtctatgttttcaggccgcttgtgg
attccactggctagacttatttctgtaagggagaaattgtctgatctgaaggagcaagtt
gaaatattgatgcacagttctaagagattttcaacttcagtgcgtacaagtattcgtgag
aaaaatgaaactttgaaaataagtccttcatataaacccaaaagaagtgatgcaaaagtg
catcttggtgataaaatagaagaaattgctaaaaggtatttatctgaagtcaaagcactg
ctgtctgttgttccagccccatacgctccattaactgagatcccatttgatgttactttg
caatcaataacaaatttgaaagatatgtttgatctcgcaaatggatgtataataactgat
ggaagtcttttcaattggatcatttctctgcttcactaa
DBGET
integrated database retrieval system
