Pyrgilauda ruficollis (rufous-necked snowfinch): 121357258
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Entry
121357258 CDS
T07608
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121357258 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121357258 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121357258 (PDLIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121357258
NCBI-ProteinID:
XP_041330350
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MGTHRIVLSGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCTDELTLTVSRTEAKVWSPLVSEEGKTHPYKMNLASEPQQRPTQFPRA
FSMTYQPAGLNSRPSPVGAMQAPMASVYDPLQSSELRRRHSASSSPSQVRVGPEQLKHAA
QVCPNSPVEVEVPGLKVLHVQFNSPLQLYSQSNIMDTLQGQISSVSPDFPSLEQHNQTPG
NIAIDKQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKAPTTK
VASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVEDQIY
CEKHARERVVPPEGYEVVTVFPK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcaccgcatcgtgctctcgggccccgggccctggggcttccgcctggtgggc
ggccgcgacttcgagcagcccctcgccatctcccgggtgactccaggcagcaaagctgcg
atagccaacttgtgtataggagaccagatcatagccattgatggagtgaacacagataac
atgacccaccttgaggcgcagaacaaaatcaagggttgcacagatgaactgactctgaca
gtcagcagaacagaggcaaaagtctggtcaccacttgtaagcgaggagggaaagacacat
ccttataagatgaatctggcctctgagccacagcagagaccgacgcagtttccgcgtgcg
ttcagcatgacataccagcccgctggtctgaacagccgcccatcgccggtgggtgcgatg
caggctcccatggcctccgtgtacgaccctctgcagagctccgagctgcggcgcaggcac
agcgcctcctccagccccagccaggtccgagtggggcctgagcagctgaagcacgcggcc
caggtctgccccaacagccctgtggaagtggaggtgccgggactcaaagtgctgcacgtg
cagttcaattctcccctgcagctctattcgcagagcaacatcatggacaccctgcagggc
cagatctcttctgttagccctgatttccccagtttagaacagcataaccagaccccaggc
aacattgccatagacaaacagtctgaagtttacaagatgctgcaggagaatcaagagtca
aatgagccacccagacagtctgcttcgtttcttgtgttgcaagagatcttggagtcagag
gagaaaggagaccccaccaaaccatctggatttaggagcgtcaaagcccctaccacaaag
gtggcctcatcgatcgggaatgcccagaagctgcccatgtgcgacaagtgtggatctggc
attgtagggatgtttgtgaagatccgggacaagcagcgtcaccccgagtgctacgtgtgc
agcgactgtggcaccaatctcaagcagaaaggacacttctttgtggaagaccaaatctac
tgcgagaagcatgcgcgggaacgggtggttccgccggagggctacgaggtagtcaccgtc
ttcccaaagtaa
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