Pyrgilauda ruficollis (rufous-necked snowfinch): 121357376
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Entry
121357376 CDS
T07608
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121357376 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121357376 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
121357376
NCBI-ProteinID:
XP_041330523
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MGRLQLYLCCCCRALWPAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQP
EPYCIVSHLQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFDPNRLKLWWQSENGLENV
TIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGQTWHVYRYFAYDCESSFPGISTGP
MKKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLH
TLGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGLDEEVEGMVHGHCMCR
HNTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGV
CDDCQHNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGL
IAGQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYC
KRLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCECRPHMFGRQCN
QVEPGYYFISLDHYIYEAEEANLGPGVSIIERQYTPDRTPSWTGIGFVRVPEGAYLEFHI
DNIPYSMEYDVLIRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGS
RYVVLPRPVCFEKGLNYTIRLELPQYSSVDTETENPYTLIDSLVLMPYCKSLDIFTVGGS
GEDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSL
SSVCDPNGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHVRGSYNAFCDVETGQCH
CFPGVYGRQCDRCLPSFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAG
YYGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPITLQVVCVCSVGYIGSRCDECASG
FFGSPDEVGGACQPCQCNNNIDTTDPEACDKRSGACVKCLYHTEGENCHLCREGYYGSAL
QQDCRKCVCNYLGTVREDCEGSESCRCEAATGQCRCLPNVVGQTCDRCAPHTWRLASGTG
CEQCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELFWGDPGVECLACDCNPRGIQ
TPQCDRATGQCICNEGVEGLHCDKCSRGYSGFFPDCVPCHQCFALWDVIISELANRTQQF
LDRANTLKITGVTGPYQQTLNTLEEKLTEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADV
TVKIADIEENLSALSAKSNSTDADLSALETDAKSLDHVVKELAEQLEFIKISDVRGALDS
ITKYFQMSLEAEERVNASTVHPDSAVELSARTRQEVEDLINEKEAQFKAKQEEQSRLLDE
LAGKLQSLDLSEVAEKTCGTAPGASCAESECGGLSCRTDEGKKKCGGPGCDGLVTVAHNA
WQKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDL
RNLIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVI
LQQSAGDIARAEMLLEEAKRASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDI
KGTQDLLTSIESENAASAETLNNATLRLFELERSVEDLRQKAATNSGNVGEIEDKIISAK
QNAEEVQKVLNNELSGKYRTVEELIARKTEESAEARRKAGVLQDEAKALLAQANSKLQLL
KDLENTYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctccagctgtacctctgctgctgctgccgagcgctgtggcccgcggcggca
caggagcccgagtacagctatggctgcgccgagggcagctgctaccccgccaccggtgac
ctgctcatcggccgcgccgcccgcctctccgcctcctccacctgcggcctccgccagccc
gagccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgtgattcg
gaggatcccttccacgatactctcaatcccgacagtcatcgcattgaaaatgtcgtcacc
acgttcgatcccaatcgcctgaagctctggtggcagtcggaaaatggtttggaaaacgtg
actatccagctggacctggaggctgagtttcatttcactcatctcattatgaccttcaag
acattccgtcctgctgcaatgttgattgaaagatcgtctgactttggacagacttggcac
gtttacagatattttgcatatgactgtgagagctcatttcctgggatttcaactggaccc
atgaagaaagtggatgatataatctgtgattcccgatactctgacattgaaccttcaaca
gagggagaggtaatatatcgtgttctagatcctgcttttcgaattgaagatccatacagt
ccaaggattcagaacctattgaagatcacaaatctgagagtcaaatttgtcaagctgcac
acgctgggagataacctcttggactccaggatggagatccgagagaagtactactatgcc
atctacgacatggtggtccgtgggaactgcttctgctacggacacgccagcgagtgcgca
cccgtggagggcttggatgaggaagtggaaggaatggttcatggtcactgcatgtgcaga
cataataccaaaggattaaactgtgagcagtgtttggatttctaccatgacttaccctgg
cgccctgctgaaggtcgcaacagtaacgcatgcaaaaagtgcaactgcaatggccactcc
agccagtgccacttcgacatggctgtgtacatgacgacggggaacaccagcgggggagtg
tgcgacgactgccagcacaacaccgtgggacgcaactgcgagcagtgcaagcccttctac
ttccagcaccccgagagagacctgcgggaccccgacgtctgtgagccttgcaactgtgac
ccagctggctcccaaaatggtgggatctgcgaccgctacactgatttctccaccggcctc
attgccggacagtgccgttgtaaattatttgtcgagggggagcgttgtgacctctgcaaa
gaaggtttctatggcctgagtgctgatgacccagcgggctgtcagtcttgtgcatgtaat
cctctgggtacccaccctgggggcaatccttgtgattcggagacaggaaactgctattgt
aagcgtctggtgacaggaaagcagtgcaatcaatgtctgcccgagcactggggcctgagc
aatgacatggacggatgtcggccctgcgactgcgaccaggggggagcgctgaacaacaac
tgctcaagtgaatctggccaatgtgaatgccggccccacatgtttggacgtcagtgcaac
caggtggagcctggctattacttcatttcacttgatcattacatctacgaggcagaggaa
gccaacttgggtcctggagtgagcataatagagcgccagtacacgccggaccgcacaccg
tcatggacaggcataggatttgtgagggtccctgagggggcgtacctggagttccacatt
gacaacatcccctactccatggagtatgatgttctgatccgctacgagccacagttgcct
gatcagtgggaaaaagctgtgatcagtgtctcacgcccaggcaagattcccacaggcagt
cggtgtggcaacacagttcctgatgacgataatcaagtggtctcactgtcacctggatcc
agatacgttgttctcccgcggcccgtgtgcttcgagaaggggctgaattacaccatccgc
ctggagctgccccagtactcctcggtggatacggagactgagaacccatacacactcatt
gactctcttgttctcatgccatactgcaaatcgctggacatattcacagtgggaggctca
ggcgaagacgtggtcacgaacagcgcttgggaaactttccaaagataccggtgtttggaa
aacagcaggagtgttgtgaaaactcccatgacagatgtctgcaagaacataatattcagc
atttctgctctactgcatgagactgcattatcatgccagtgtgacccgcagggctccctg
agttcggtgtgtgaccccaatggaggacagtgccagtgtcgtcccaatgttgttggaaga
cagtgcgacagatgtgcccctggcacctttggctttgggccaagtggatgccgaccgtgt
gagtgccacgtccgaggctcttacaacgccttctgcgacgtggagacgggccagtgccac
tgcttccctggggtgtacgggcggcagtgcgaccgctgcctgcccagcttctggggcttc
cccagctgccagccctgccactgcaatggccacgctgacgactgcaacccctacaccggg
gagtgcctgagctgccgggaccacacagccggacacaactgtgagaggtgccaggctggc
tactatggagaccccatcctgggatcaggtgaccactgccgcccctgcccttgccctgac
ggccctgagagtggacgccagtttgccagtggctgttaccaggatccaatcacactgcaa
gtcgtgtgtgtctgtagcgtgggatacataggcagtcgatgtgatgaatgtgcgtctggt
ttctttgggagccccgatgaggtcggtggcgcctgccagccgtgccagtgcaacaacaac
atcgacaccactgacccagaggcctgcgacaagaggagcggagcatgcgtgaagtgcctc
tatcacaccgagggtgaaaactgccacctctgcagagagggctactacgggagtgccctg
cagcaggactgcagaaagtgcgtctgcaactacctgggcaccgtccgggaggactgcgag
ggctcggagagctgccgctgcgaggcggccacggggcagtgccgctgcctgccgaacgtg
gtggggcagacgtgtgaccgctgtgccccccacacgtggcggctggccagcggcaccggc
tgcgagcagtgcgactgcgaccccgcgcgctccctgggccccgcctgcaacgagttcaca
gggcagtgccactgcatgccgggtttcggaggccggacctgccgggagtgccaggagctc
ttctggggtgacccaggcgtggagtgcttggcatgtgactgcaaccctcgtggcatccag
accccacagtgtgaccgtgccactgggcagtgcatctgcaatgaaggcgtggaagggctt
cactgtgacaagtgctcccggggctactcaggcttcttccctgactgcgtgccctgccac
cagtgctttgccctctgggatgtgatcatcagcgagctggctaatagaacccagcagttc
ttggacagggccaataccctcaaaatcactggagtcactggcccataccagcagacgctc
aacacactggaggagaagctcactgaaattaaaaccatcattgctcaaaatccagcagca
gagcccctgaagaacattggcaatctctttgaggaagcagaaaagctgacagcagatgtt
acagttaagatagctgacatagaagaaaacctatcagccttatcagcgaagagcaatagc
acagacgcagacctgagtgcactggagacagatgccaaaagtctcgaccacgtcgtgaaa
gaacttgcagagcagctagagttcatcaagatctctgatgttcggggagccttggacagt
atcaccaagtacttccagatgtccctggaggcagaggagagggtcaatgcctccactgtt
catcccgatagcgccgtggagctgtcagcgcgaacacggcaggaagtggaagacttaatc
aatgagaaggaggcccagttcaaggctaagcaggaggagcagtcacgccttctggatgaa
ctcgctggaaagctgcagagcctggatctctctgaggtggctgagaagacgtgtggcact
gctccgggagcctcctgtgccgagtccgagtgcggggggctgagctgtcggacagacgag
gggaagaagaagtgtggaggccccggctgtgacgggctggtgactgtagcacacaatgcc
tggcagaaggctatggattttgacagagacatcctcagtgcattagcagaagttgagcaa
ctctccagaatggtttctgaggcaaaacagagagcagatgaagcaaaacaaaacgcgcaa
gcagttttgcttaaaaccaatgctacaaaagaacaagtggacagaagcaatgaagatctg
agaaatcttattaaacagattagagacttcctaatgcaagacagtgctgacctggatagc
attgaggcagtggctaatgaagtgctgaacatggagatgccaagcactccccagcagctg
caggccctgacagaagatattcgtgagcgtgtagaaagcctttctgatgttgaggtcatt
ctgcagcagagcgctggagacattgccagagcagaaatgctactggaggaagctaaaaga
gcgagcaaaggtgcaacagatgttaaagtcactgcagacatggtgaaagcagcactggaa
gaagctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagatatt
aaaggaactcaagacttgctgacttcgattgaatctgaaaatgcagcttctgcagaaacg
ctgaacaatgctaccttacgtctgtttgaactagagaggagtgttgaagaccttaggcaa
aaggctgctacaaattcagggaatgtgggagaaatagaagacaaaattattagtgcaaaa
caaaatgctgaagaagttcaaaaggtgctcaacaatgagctgagtggcaagtacagaact
gtggaagagctcattgccaggaagacagaggagtcagccgaggcccggaggaaagcaggc
gtgttgcaagatgaagctaaagccttgttggctcaagcaaacagcaaactccagctgctc
aaagatttggaaaatacatatgaaaacaatcaaaaagttctggaagacaaagccaagcag
ttggtggagctggaagagacagttcgctccctcttacagacaatcagccagaaggttgct
gtttatagcacttgcttataa
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integrated database retrieval system
