Pyrgilauda ruficollis (rufous-necked snowfinch): 121357804
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Entry
121357804 CDS
T07608
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121357804 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121357804 (NHLRC1)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121357804 (NHLRC1)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121357804 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
121357804
NCBI-ProteinID:
XP_041331358
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSVRIWWVCEYSGGWLNILEDTWMCWWMYAHGWTCGCRGGRGDIPRSRREGRPGPCSAPA
GPQGARARLGRAQRPPRWARGIRGRCGGSDRSPQAGMAAEDEAELSLLECRVCFEPYGPD
GQRRPLNLPCGHVLCRGCVGALAGAERQRLECPFCRRLCGPAETSDCRPLLQLLELLGPA
GGGLASALGRSGGGAAAAPAGLGLRLCLGGWGSLVNPTGVAACPGSGRLAVAHDGKKRIH
VFGPSGFCLRRFGERGDASNDIKYPLDVTVTSDGHVVVTDGGDCSVKAFDFEGRGVLAVR
EGFCLPWGLDATPKSEVILTDSEAGALYRLTADFQRGELKKCQMIRSRLVSPRAVAVCQT
SGAVVVIEHLKARGASRGSTRVTIFSAEMDLIGQMDSFGLNLVFPSRIYATAVAFDKEGR
VIVTDVCSQAVICLGKPEEFPIFNPLISNGLSYPVGLTYTANNSLVVLDSGDHSVKVYSS
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaagaatctggtgggtatgtgaatattctggcgggtggttgaatattctggag
gacacttggatgtgctggtggatgtatgcgcacgggtggacgtgcgggtgccgcggtggg
cgcggggacatcccgcggtcccggcgggaagggcggcccgggccctgctccgcccccgct
ggcccgcagggggcgcgcgcccgcctcggccgcgctcagcgcccgccccgctgggcccgg
gggatccggggccgctgcgggggctccgatcgctcccctcaggcggggatggcggcggag
gacgaggcggagctgagcctgctggagtgccgggtgtgcttcgagccgtacggccccgac
gggcagcggcggccgctcaacctgccctgcgggcacgttctctgccggggctgcgtgggg
gccctggccggcgccgagcgccagaggctggagtgtcccttctgccggcggctctgcggc
ccggccgagaccagcgactgccgcccgctgctgcagctgctggagctcctgggccccgcc
ggcggcggcctcgcctcggccctgggcaggagcggcggaggggcggcggcggcccccgcg
gggctcgggctgcggctgtgcctggggggctgggggtcgctggtgaaccccaccggggtg
gcggcctgccccgggtcgggccgcctggcagtggcgcacgacggcaagaagaggatccac
gtcttcgggccgagcgggttctgcctgcggcggttcggggagcggggggacgcgagcaac
gacatcaagtatccgctcgatgtgacggtcacgtcggacgggcacgtggtggtcaccgac
ggcggagactgctccgtgaaggccttcgattttgagggaaggggcgtcctggctgtccgg
gaaggcttctgtttgccctggggcttggatgccacccccaagagcgaagtaatcctgacg
gactcggaggcaggcgcgctctaccgcttgacggccgacttccaaaggggggaattaaag
aagtgccagatgatccggtcccggcttgtcagccccagggcagttgcagtctgccagacc
tcgggtgctgtcgtggtaatagagcacctgaaagctcgaggtgcgagcaggggcagcacc
cgagtgacgatattcagtgcggagatggatctcatcggccagatggacagctttggcctg
aacctcgttttcccctccagaatatatgctacggctgtggcctttgacaaagaaggtcgt
gttatagtaacggatgtttgtagccaggctgtcatatgcttaggaaaacctgaggaattt
cccatctttaatcctctaattagtaacgggctttcttatcctgttggactgacttacacg
gcaaacaattccctcgtcgttttagacagcggtgatcattcagtgaaggtatatagctct
gcctga
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integrated database retrieval system
