Pyrgilauda ruficollis (rufous-necked snowfinch): 121357858
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Entry
121357858 CDS
T07608
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121357858 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121357858 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121357858 (LDB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
121357858
NCBI-ProteinID:
XP_041331480
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIDSPRAVIPHQKEPAWEMNGNRTTF
SPLTNTATGPMGSVLATNGTFSGYLNQQEISLSNSSSYLKTTTVRSSMSSQSVTPDISPA
KSSLGSKASPALAGGSSPAHQLSPARQYNNPIGLYSAETLREMAEMHKLSLNRRASEGGL
PRGTLPIKDPHVDSASPVYQAVLKTQNKPEDDSEDWSRRSANLQSKSFRILAQMTGTEYM
QDPDEEALRRSRDKENLAAASENRPTGTAHAPQYVTSSIWHPPKSSTRDANTANAQPVAS
KGSVRLGAGTSQGEAGVGQKAPLASSSNQSTPVEHAPVAPSSAAPAPHASAPQPATAAPN
TASLMAAPATTSVVQESFSSSFQRNTVQSYTPMPVSGGYSESPAPSAASKMRVVTTASIK
PSVYQPAPAPVHSYTPANTEPASRPPWVTDDSFSQKFAPGKSTTTVTKHILPRGAPVLSP
ATIPAYPSPVSTPSQPPALARGTVQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHP
EEFNCAYCKTSLADMCFVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHTS
CFVCAACKKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDYPVEAGDKFIEALGHTWHD
TCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagtgtgactctgaatggacctggaccgtggggcttcagactgcaagggggc
aaggacttcaacatgcccttgaccatctccagaatcacccctggcagcaaggcagcacag
tcccagatgaaccagggggaccttgtcgtggccattgatggagtcaacactgacagcatg
acccacctggaggcccagaacaagatcaaatcagccagccacaacctgagcctcactctg
cagaaatctaaacgtccagtgccagtttcaaccacagctcccagaattgactctcccagg
gctgtaattccccatcagaaggaacctgcttgggaaatgaatggcaacagaacaaccttc
agccctctaactaacacggcgacggggcctatgggtagtgttttagcaaccaatggaacc
ttttcaggctacctcaaccagcaagagatcagcctttcaaatagctcttcctacctaaag
actaccactgttagatcttccatgtcctctcagtccgtgactcctgacatttcacctgcc
aagagctcgttaggttccaaagcaagcccagctttggctggtggcagtagccctgctcac
cagctgagccctgcaaggcagtataacaaccccattggcctttactcggcagagaccctg
agggaaatggctgagatgcataaattgagtctcaaccgaagggcttcggaaggtggactt
cctagaggtaccctccctataaaggatcctcacgtagacagtgcctctccagtgtatcag
gctgtgcttaaaactcagaacaagcctgaggatgacagtgaggactggagccgtcgctct
gccaacctgcagtccaagtccttccgcatccttgcccagatgactggaactgagtacatg
caagatccagatgaagaagccctgaggaggtcaagagacaaggaaaaccttgcagcagca
tcagaaaacaggcctacaggtaccgcgcatgcgccccagtatgtgacctcgagtatttgg
catcctcctaagtcatccaccagggatgccaacactgccaatgctcagccagtggcctcc
aaggggtctgtgaggcttggagcaggtacaagccagggggaggccggtgttggccagaaa
gcccctcttgcttcatccagtaaccaaagtacccctgttgagcatgccccggtggctccc
agttctgctgctcctgcaccacatgcttcagcacctcagcctgctactgctgctccaaac
acagccagcctgatggcagcaccagccaccacctcagtagtgcaagagtctttctcatcc
tccttccaaagaaacacagtccagtcatatacaccaatgccagtttctggaggctacagt
gaaagtcctgctccttctgctgcttcaaaaatgagagttgttactactgccagcataaag
ccctctgtctaccagccagcgccagcaccagttcattcctacacccctgccaacacggag
cctgcgagtcgccctccctgggtaacagatgactccttttcccagaaatttgcacctgga
aaatccaccaccactgtcacaaagcacatcctaccaaggggtgctccagtgctatcccct
gccacaattcctgcttacccgtctccagtttcaactccttcccagccccctgcgttagcc
cggggaacagttcagagggcggagcgttttccagccagcagccgaactcctctctgcggg
cactgtaacagcatcattcgagggcctttcctggtagccatgggtcgctcttggcaccca
gaagaattcaattgtgcttactgcaagacatccttggctgatatgtgctttgtggaggag
cagaacagtgtgtactgtgagcgctgctatgaacagttcttcgcaccgacctgtgccagg
tgccacactaagattatgggggaagtgatgcatgccctaagacagacttggcacacgagt
tgctttgtctgtgctgcttgtaagaagccatttgggaatagcctgttccacatggaggac
ggggagccttactgtgagaaagattatattgctttgttcagcacaaaatgtcatggctgt
gattatcctgttgaagctggagataaattcattgaagctcttggacacacttggcatgac
acctgcttcatttgtgctgtatgccatgtgaatttggaaggtcagccattctactccaag
aaggacaagccactgtgcaagaagcatgcccacgctatcaatgtttaa
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