Pyrgilauda ruficollis (rufous-necked snowfinch): 121357980
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Entry
121357980 CDS
T07608
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121357980 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121357980 (TRIP12)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121357980 (TRIP12)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
HECT type E3
121357980 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
121357980
NCBI-ProteinID:
XP_041331712
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MSNRPSNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQQEDPERINTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALEHTEPSSETSKPHTKSKRRHSDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIESGSSVESTGTEEKSAKVSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEPSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEPPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLASTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVEHYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEIYLISTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctagtaacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaag
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaacaagaagatccagagagaatcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttgaacacactgaa
ccttcctcagaaactagcaagccacatactaaatctaagagaagacactcagaccaagag
cagcccaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtatagagagt
gggtcatcagttgaatcaactggcactgaagaaaagtcagcaaaagtctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttccacctcctcctcctcttctgctgttgcctctgcttcttctactgttcctcagggt
gccagagtgaaacagggaaaggaccagagtaaggctagacgttcccgttctgcatccagc
cccagtccaagaaggagtagcagggacaaagaaccaagtaaaacaggtggctcttcaaag
tttgactgggctgctcgatttagcccaaaagtcagtctccctaaaacaaaactgtctcta
ccaggctcttccaagtcggagacatcaaaacctggaccttcaggactacaggctaagcta
gcaagtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttacggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggagttaactcttcagctgcacggacagatgagcctccccaggga
gctgcagcttctagttctgttgctggagctgtaggtatgacaacttctggagaaagtgag
tcagatgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagctcaacagcttttacaaggtctccaagctactgatgaaagtcag
caactacaggcagtgattgagatgtgccagctgttggttatgggaaatgaagaaacatta
ggaggatttccagtcaagagtgttgtaccagctttgataacactgctgcagatggagcac
aactttgacattatgaatcatgcatgtcgggccttaacatacatgatggaagcacttccc
agatcatctgctgtagtggtagacgcgattcctgtcttcttggaaaagctgcaagttatc
cagtgcattgatgtggcagagcaggcacttacagccctggaaatgctgtcacgcaggcac
agtaaagccattctgcaggcaggtgggttggcagattgcttgctgtatctggaattcttc
agtataaatgcacaaagaaatgcactagctatcgctgccaactgctgccagagtataaca
cctgatgagtttcactttgtggcagactctttgccactgctaacacaaaggttaacccat
caggacaaaaagtctgttgaaagcacctgtctgtgttttgcacggctagtggacaatttc
cagcatgaagagaacttgctgcagcaggttgcttccaaggacttgctaacaaatatccag
cagctcttggtcgtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttctccctgatgtgctccaactgccccacacttgcagtccagcttatgaagcaaaat
attgcagaaacgcttcacttcctcctttgtggagcctcaaatgggagctgtcaagaacaa
attgaccttgttccacgaagtcctcaagaactttatgaacttacttctcttatttgtgaa
ctgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaagga
aatgcacaaaatacagatggtgcaatatggcaatggcgagatgacaggggtctctggcat
ccctataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgag
ataagcctgtctacgctggggcgtgtctatactattgattttaactctatgcagcaaata
aatgaggatactggaacagctcgtgccattcagcgaaaaccaaaccctttagccagtaca
aacactagtggacattcggaattgaagaaggatgatgctcgagcacaattaatgaaagag
gacccagaactggcaaaatcctttatcaaaacactgtttggtgttctttatgaagtatat
agttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttcaagtcat
attgcctccatgctgtcgagtcaagaccttaagatagtagttggagccctgcagatggca
gagattttaatgcagaagttacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaaaaacttggcagagtctgaggctttgctaacaagccccccaaaagtc
tgcactaatggatcaggaacgctgggaaccactacaaccataagcactgggacagccact
gctgccagcaacgcagctgcagatttgggctctcccagcttgcagcacagccgggaggat
tccttggatctgagcccacagggacgactgagtgatgttctaaagagaaagagactgcca
aaacgagggccaaggagaccaaaatactcccctccaagagatgatgacaaagtagacaat
caagctaaaagccctacaactacgcagtctcctaaatcatctttcttggcaagtttaaat
cctaaaacatggggaagattaagcacacagtccaacagtaataatattgaaccagcacga
acagcaggagtaagtggtcttgcaagggctgcttccaaggataccatttccaataacaga
gaaaaaatcaagggctggattaaggagcaagctcataaatttgtagaacattactttagt
tctgaaaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagc
attgtctcggaatctgacgtctcctcatttgaaatccagcatagtgggtttgttaaacaa
ctgctgctctatttgacatctaaaagtgaaaaagatgctgttagcagggatatcagattg
aaaagatttcttcatgtatttttttcttctccgcttcctggagaagagccccttggaaga
ttagagccattagaaaatgcacctttgttggcattagtccataaaatgaacaactgcctc
agtcagatggaacagtttcctgttaaagtgcatgacttccctagtggaaatggaacaggg
agcagtttttctcttaacagaggatcccaagctttaaaattcttcaatacacatcaatta
aaatgccaactgcaaagacatccggactgtgctaatgtgaaacagtggaaaggtggacct
gtgaagattgatcctctggctttggtacaagccattgaaagataccttgtagttagaggc
tatggaagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaata
gatgaatctttggctgctcaattcttaaattcagggaatgtgagacatagattgcagttt
tacattggagatcacttgctgccatacaatatgactgtgtaccaagcagtgaggcagtac
agtttacaagctgaggaagagagggagtctacagatgatgaaagcaacccactgggaaga
gctgggatttggacaaaaacacacaccatttggtacaaacctgtgcgagaggatgaagat
ggtaataaggactgtgttgggggtaaaagaggaagagcacaaactgctcccacaaaaacc
tcccctagaaattctaaaaaacatgatgagttgtggcatgatggcgtatgcccttcggtg
ttaaatcctctggaaatttacctcatatctactccacctgaaaatataacatttgaagac
ccctcattagatgttattcttcttttgagagttctacatgctatcagtcgatactggtat
tacttgtatgataatgcagtctgcaaggagataattccaacctcagagtttatcaacagt
aaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaattatgacaggaaac
atcccgacttggctgacagaacttggaaaaacatgcccatttttctttccatttgatacc
cgccaaatgctgttttatgtaacggccttcgatcgtgatcgagccatgcaaaggctactg
gacactaatccagaaatcaatcagtcggattctcaggatagcagagtggcaccacggctg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatg
caggatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcaca
ggcctaggccctacactagagttctatgcacttgtatctcaggaactacagagagcagac
ttaggcctttggaggggagaagaagtgactttagccaatccaaaaggaagccaggaaggt
accaagtacattcataaccttcaaggcctttttgcacttccttttggtagaacagccaag
ccagctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaag
gcaatcatggacttcagactggtggatcttcctcttggacttcctttttataagtggatg
ctacgacaggaaacttccttgacatcacatgacttgttcagtattgatccagtagtagcc
aaatcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggataaa
actcagaccaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctca
gtggaagatctagggctggacttcacacttcctgggtttcccaacatagagctgaaaaag
gggggaaaagatacaccggtcactatccacaatttagaggagtatctcagattggttata
ttctgggcactaaatgaaggtgttgccagacagtttgactccttcagagatggatttgag
tcggtgttcccccttagtcatcttcagtacttctatcctgaggagttggagcagctcttg
tgtggcagcaagacagacacttgggatgcaaagactttaatggaatgttgcaggcctgat
cacggttatacgcatgacagtcgagcagtgaagtatctttttgaaattctcagtagtttt
gatagtgagcagcaaagactgtttcttcagtttgtgacaggcagccccagactgcctgta
ggaggttttcgaagtttgaatcctcccctgacgattgtacggaagacatttgagtccaca
gagaatcccgatgatttcttaccctcagtaatgacctgtgtgaactatctcaaattgccg
gactattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
