Pyrgilauda ruficollis (rufous-necked snowfinch): 121358349
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Entry
121358349 CDS
T07608
Name
(RefSeq) tenascin-X-like
KO
K06252
tenascin
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
pruf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121358349
04518 Integrin signaling
121358349
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121358349
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pruf00536
]
121358349
Glycosaminoglycan binding proteins [BR:
pruf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121358349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fibrinogen_C
Motif
Other DBs
NCBI-GeneID:
121358349
NCBI-ProteinID:
XP_041332390
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
AAEEPEELPLPTEEPQQEKPQTEAPTSEATPAKAVLEDLRVSSVNPSSVQLHWTVPKGSF
DSFMLQYRDAQGQPQALPIDGESHSVTVPGLSPSQRYRFHLYGLRGRKKIDHVSTEVVTG
TPEDLPPPSKDPTDEASTTEAPTAQDHKPEHSQTEAPSAQAALGELKVSSITPDSVELQW
SVPEGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSLSHRYRFHLYGLYRGKRIDHV
SIDVSTDSSVDVGWVPVQIEGIGWIMDGRMDGHTHAHTHHCPLSVVSAGTPEDLPPPSKD
PTDEASTTEAPTAQDHKPEHSQTEAPSAQAALGELKVSSITPDSVELQWSVPEGSFDSFM
LQYRDAQGQPQALPIDGGSRSVTVPGLSLSHRYRFHLYGLYRGKRIDHVSIDVSTAATDK
QEEPPFPSEEPQTETPPSEDNQPEHPQTEVPPVRAVLGELKVSSVTPNSVQLQWSIPEGS
FDSFMLQYRDAQGQPQALPIDGESRSVTVPGLSPSQRYHFHLYGLRGRKRTDHVSTDIIT
AAAKTEELPLTSEEPPLTSEEPKTEAISSDALPARAVLGELKVSSVTPNSVQLQWNVPEG
FFDSFALQYRDAQGQPQALPIDGGSRSVTVPGLSPSHRYRFHLYGLQDGKRIDHVSTDVV
TDAAVPEQLPLPSQEPQPEDLNPEQPQTEQHQTEASQGQVVLGKLRVSSVTSNSVQLQWS
VPEGSFDSFTLQYRDAQGQPQALAVDGGSRSVTVPGLSPSRRYRFHLYGLRDRKRIDRVS
TDVFTADPEDLSLPSIDTPTRGPPAEDHETSHSQAEAPPSAAPSARAVLGELKVSSVTPN
SVGLQWSVPEGQFDSFTLQYRDAQGQPQALPIDGGLHSVMVPGLSPSQRYRFHLYGLRGG
KKTDHVSTDVITADGEAAAVPEELPLPSEEPQDEQRQIKAPSATTPARAVLKELRVSSVT
PDSVQLQWRVPEGSFDSFMLQYRDAQGQPQALPIDGGFRSVTVPGLSPSSRYRFHLYGLR
GGKRVYHTSTEAVTAATNLDELPVPSEEFQPEDPQPKDPPVESPSTDTPSARAVLEDLRV
SSVTPSSVQLHWTVPKGSFDSFMLQYRDAQGQPQALPIDGGSRSVTVPGLSPSQRYRFHL
YGLRGGKRIDRVSTDIVTATAKTEELPLPSEEPQPEDPKGKDPPAEATPSAAPLARAVLG
ELEVSSVTPSSVQLQWNVPEGSFDSFMLQYRDAQGQPQALPIDGGSRSVMVPGLSPSQRY
RFHLYGLRGGKRIDHVSTEAITDSHTHHHPVSIAATAKTEELPLPSEEPQPEDPKGKDPP
AEATPSAAPLARAVLGELEVSSVTPSSVQLQWNVPEGSFDSFMLQYRDAQGQPQALPIDG
GSRSVMVPGLSPSQRYRFHLYGLRGGKRIDHVSTEAITGAPGTLWVGSVWPRSAWLHWDP
LQAPPDGYELEYGPPGGPQQSLWLPPEATSQQLWGLEPAGHYGVRLWGRGGDPQTAPLEA
TFDTPPLPHPHPRDCAEEQLNGPGPSRETLIFLRGDPARPLRVFCDMETDGGGWLVGLGA
LVGGASAGGYRRFCGVLGGKEGLWGQ
NT seq
4763 nt
NT seq
+upstream
nt +downstream
nt
gcgctgcagaagagccagaggaactgcccttgcccacagaggaaccgcagcaggagaaac
cccaaactgaggcccccacatctgaggccactccagcaaaggcggtgctggaagacctga
gggtctcgagtgtcaaccccagctctgtgcagctgcactggactgtccccaagggctcct
ttgactccttcatgctgcagtaccgggatgcccagggccagccccaggccctacccatcg
atggcgagtcccactcagtgacggtgccagggctgtccccttcccagcggtaccgcttcc
acctctatgggctgcggggcaggaagaagattgaccatgtgtccactgaggttgttacag
gcaccccagaggatcttcccccaccctcaaaggaccccacagatgaggcatccacaactg
aggcccctacagctcaggaccacaaacctgagcattcccaaactgaggccccctcagcac
aggcagcactgggagagctgaaggtgtccagtatcacacctgactctgtggagctgcagt
ggagtgtaccagagggctcctttgactccttcatgctgcagtaccgggatgcccagggcc
agccccaggccctgcccatcgatggcgggtcccgctcagtgacggtgccagggctgtccc
tgtcccaccggtaccgcttccacctctacgggctgtacagagggaaaaggattgaccacg
tttccatcgacgtcagcacagattccagtgtggatgttgggtgggttcctgtccaaattg
aaggaattgggtggataatggatggacgtatggatggacatactcatgcccacacccatc
attgtcctctctctgttgtttctgcaggcaccccagaggatcttcccccaccctcaaagg
accccacagatgaggcatccacaactgaggcccctacagctcaggaccacaaacctgagc
attcccaaactgaggccccctcagcacaggcagcactgggagagctgaaggtgtccagta
tcacacctgactctgtggagctgcagtggagtgtaccagagggctcctttgactccttca
tgctgcagtaccgggatgcccagggccagccccaggccctgcccatcgatggcgggtccc
gctcagtgacggtgccagggctgtccctgtcccaccggtaccgcttccacctctacgggc
tgtacagagggaaaaggattgaccacgtttccatcgacgtcagcacagcagccacagaca
agcaagaggagccacccttcccctcagaggagccccaaactgaaaccccgccatctgagg
acaaccaacctgagcacccccaaactgaggttcccccagtgcgggcagtgctgggagagc
tgaaggtctccagtgtcacgcccaactctgtgcagctacagtggagcatccctgagggct
cctttgactccttcatgctgcagtaccgggatgcccagggccagccccaggccctgccca
tcgatggcgagtcccgctcagtgactgtgccagggctgtccccttcccagcggtaccact
tccacctctatgggctgcggggcaggaagaggacggaccatgtctccaccgacattatca
cagctgcagcaaagacagaggagctgcccctgacctcagaggaaccacccctgacctcag
aggagcccaaaactgaggccatctcatctgatgccctgccagcacgggcagtgctggggg
agctgaaggtctccagtgtcacacccaactctgtgcagctgcagtggaatgtcccagagg
gcttctttgactcctttgcactgcagtaccgggatgcccagggccagccccaggccctgc
ccatcgatggtgggtcccgctcagtgacagtgccagggctgtccccatcccatcggtacc
gcttccacctctacgggttgcaagatgggaaaaggattgaccacgtgtccactgatgtcg
tgacagatgcagcagtgccagagcagctgcccctaccctcacaggagccccaacctgaag
acctcaaccctgagcagccccaaactgagcagcaccaaactgaggccagccagggacagg
tggtgctggggaagttgagggtctccagtgtcacatccaactctgtgcagctgcagtgga
gcgtccctgagggctcctttgactccttcacactgcagtaccgggatgcccagggccagc
cccaggccctggctgttgatggcggatcccgctctgtgacggtgccagggctgtcccctt
cccgccggtaccgcttccacctctatgggctgagggacaggaagaggattgaccgagtct
ccaccgatgttttcacagctgacccagaggatctgtccctaccctcaattgacaccccaa
ctcggggccccccagctgaggatcacgaaacttcacattcccaagctgaggcccctccat
ctgcggccccctcagcacgggcagtgttaggagagctgaaggtctccagtgtcacaccca
actctgtgggactgcagtggagtgtaccagagggccagtttgactccttcacactgcagt
accgggatgcccagggccagccccaggccctgcctatcgatggcgggttgcactcagtga
tggtgccggggctgtccccttcccagcggtaccgcttccacctctacgggttgcggggtg
ggaagaagactgaccatgtctccactgatgtcatcacagctgatggggaagctgcagctg
tgccagaggagctgcccctgccctcagaggagccccaagatgagcaacgccaaattaagg
ccccatctgcaaccaccccagcacgggcagtgctgaaggaactgagagtctccagtgtca
cacccgactctgtgcagctgcagtggagagtccctgagggctcctttgactccttcatgc
tgcagtaccgggatgcccagggccagccccaggccctgcccatcgatggcgggttccgct
cagtgacagtgccagggctgtctccatccagccggtaccgcttccacctctatgggctgc
ggggtgggaagagggtctaccatacctccactgaagctgttacagctgcaacaaacttgg
atgagctacccgtgccttcagaggagttccaacctgaggacccccaacctaaagatcccc
cagttgagtccccatcaactgacaccccttcggcacgggcagtgctggaagacctgaggg
tctcgagtgtcacccccagctctgtgcagctgcactggactgtccccaagggctcctttg
actccttcatgctgcagtaccgggatgcccagggccagccccaggcactgcccatcgatg
gcgggtcccgatcggtgacagtgccagggctgtccccttcccagaggtaccgcttccacc
tctatggactgaggggagggaaaaggattgaccgtgtctctactgacatcgtcacagcca
cagccaagacagaggagctgcccctgccctcagaggaaccccaacctgaggaccccaaag
gaaaagaccccccagctgaggccactccatctgcggcgcccctggcacgggcagtgctgg
gagagctggaggtctccagtgtcacacccagctctgtgcagttgcagtggaatgtccctg
agggctcctttgactccttcatgctgcagtaccgggatgctcagggccagccccaggcac
tgcccattgatggcgggtcccgatcggtgatggtgccagggctgtccccttcccaacggt
accgcttccacctctatgggctgaggggagggaaaaggattgaccatgtctccactgagg
ccatcactgattctcacacgcatcatcatcctgtctccattgcagccacagccaagacag
aggagctgcccctgccctcagaggaaccccaacctgaggaccccaaaggaaaagaccccc
cagctgaggccactccatctgcggcgcccctggcacgggcagtgctgggagagctggagg
tctccagtgtcacacccagctctgtgcagttgcagtggaatgtccctgagggctcctttg
actccttcatgctgcagtaccgggatgctcagggccagccccaggcactgcccattgatg
gcgggtcccgatcggtgatggtgccagggctgtccccttcccaacggtaccgcttccacc
tctatgggctgaggggagggaaaaggattgaccatgtctccactgaggccatcactggcg
ccccagggaccctctgggtgggctctgtgtggccccgaagtgcctggctgcactgggacc
ccctgcaggccccccctgatggctatgagctggagtatggcccccccggcggaccccagc
agagcctgtggctacctcctgaggctacgtcgcagcagctgtgggggctagagccggcag
gacactatggggtgcggttgtggggccgagggggagacccccaaacagcccccctcgagg
ccacctttgacactccccccctcccgcacccgcacccccgggactgcgccgaggagcagc
tgaacgggccgggcccctcgcgggagaccctcatcttcctccggggggacccggcccggc
ccctcagggtcttctgtgacatggagacggacggcggcggctggctggtgggactggggg
cactggtggggggagcttctgcagggggttataggaggttctgtggagttctggggggga
aagaggggctttgggggcaatag
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integrated database retrieval system
