Pyrgilauda ruficollis (rufous-necked snowfinch): 121358406
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Entry
121358406 CDS
T07608
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf00310
Lysine degradation
pruf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121358406 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121358406 (PRDM2)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121358406 (PRDM2)
Enzymes [BR:
pruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
121358406 (PRDM2)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121358406 (PRDM2)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121358406 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2HE
zf-C2H2_11
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
121358406
NCBI-ProteinID:
XP_041332505
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MNQNTTDSPVAVETLDDVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAAGEELLVWYNGEDDPAIAAAIEEERASARSRRHSPKARRGKKKTQEGKN
KGKKAADTKQKKSDLDSTSADMRDSKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLP
KLMVPSPTNETQVVTEDKQEEAINCASDDLDDDEEEDEEEEDEEELEDTNMPKENAEMPL
ICEEKLDSMEEQKSTSEESPESSPKKKLVVKIPKAEGESNGDVQETFMFPCQHCERKFTT
KQGLERHMHIHISTLSHAFKCRYCGKAFGTQINRRRHERRHEAGPRRKPFLTLTSSQHLD
NVADNQVIVDDGLKDDLNVPSLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCK
KVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLPTEPAPAVQSVYIASTEIEEEG
EGDDVYLMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVE
ISTNLKVTQTHVNEPPKEPSSSGSSESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPL
SISTESIPFHKEKGVYLSSKLKQLLQTQDNKKITPSSEIPKIGPSVTSSSVLPPVSSRFK
RRTSSPPSSPQHSPVLRDFVKSGEGKTVWNDNIRSSKMPKLESHSNSPAWSLTGREDKET
LSPHCFEEYKISKDWTAAPTFGNVCNQQPLDLSSGMKQRSDVKSKTQVPWESVLDLSVHK
KPCSDAEIREYKENSTHPTCSGVKKKKPTTCMLQKVLLNEYNGTDAAADSAPGTDSASPS
KAPEPRAEPDADPALSASSSTDTQPLSSSASPVPQASAAPAVCQLPPLLTPTNPPSPPPC
LPVLTVATSPPPLLPTMPLPIPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSP
VPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLESS
LPIIKQEEAESEQQKAREEPHTSSESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHA
EEWPFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDK
ECTHHEFESGTLRPQNFTDPSKANAEHMQNLPEDSLEPSKEEEDEDLNDSSEELYTTIKI
MASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRC
TKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFR
RMGQPKRLNFNVEISKMSSNKLKISALKKKNQLVQKAILQKKKSAQQKAELKNNPSETDS
HICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSSKKSAASSPANSDKGSNQRRRTA
DAEIKMQSTQPHLGKTRARTSGPAQLQLPSASFKSKQNVKFVPSMRSKKPNSSSSLRNSS
PVRVSKMSHVDGKKTKVVSKNNSSGISSKAARKLHVRIQRNNKAVLPSKSAVASKKKADR
FSVKSRERIGGPITRSLQQAANAEAAENKRDESSTKQELKDFR
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgactcccctgttgctgtggagaccttggatgatgttcctgag
cacgtgcttaggggccttcctgaggatgtgaggctcttcccatctgctgttgacaagact
cggctgggtgtctgggcaacaaagtcaattttgaaaggcaagaaatttggaccatttgtt
ggtgacaagaaaaaaagatctcaagttaagagcaatgtgtacatgtgggaggtgtattac
cccaacctgggctggatgtgtgtggatgccaccgacccagagaagggcaactggctgcgc
tacatcaactgggcccgctcagggaaggagcagaacctcttccctctggagatcaacagg
accatttactacaagagtttaaagccaatcgcggcgggagaggagctgttggtgtggtac
aatggcgaggacgacccggcgatagcggccgcgatcgaggaggagcgagcgagcgcccgc
agccgccggcactccccgaaggcccgcagaggaaagaagaagactcaggaaggtaaaaac
aagggaaagaaggcagcagatacgaaacagaaaaagagtgatttggattccacttctgca
gatatgagggattctaaagaaggtcataaagaggaagatgaaacgccttctgtttctgct
gtgctttctctggaacaaacagctgtgattcaggaaatggtaaatcaagatgtactgcca
aagctgatggtccccagtccaaccaacgaaacacaagtggtaactgaagacaaacaagaa
gaagcaataaactgtgcatcagatgatttagacgatgatgaagaggaggatgaagaagag
gaagatgaagaggagttagaagataccaatatgcctaaagaaaatgctgaaatgcctttg
atatgtgaagaaaagttggactccatggaagaacaaaagagtacgtcagaggaatctcca
gaaagctctccaaagaaaaaactggtggtgaaaattccaaaagcagagggggaatccaac
ggtgatgttcaggaaacattcatgtttccttgccagcattgtgagaggaagtttacaaca
aagcagggactcgagcgccacatgcacatccatatatccaccctgagccacgcgttcaag
tgccggtactgcgggaaagcctttggcactcaaatcaacaggaggaggcacgagcgacgc
cacgaggcggggccgagaaggaaaccattcctgacactgacatcatcacaacacttggat
aatgttgctgataaccaagtgattgtggatgatggtcttaaagatgacctgaatgttccc
agtcttgtgcaagactctgttgtcttggattctgagaaagtttcccaggaaatgtcaaac
tccgcgtttgctgaggaaaataaggagcccaaagaattgcatccatgcaaatactgcaaa
aaggtttttggtactcacaccaacatgaggaggcatcagcgtagggttcacgagcgtcat
cttattcccaaaggtgtcagaagaaaagggttctttactgaagagccacctctcccaaca
gagccagccccagcagtccagagtgtgtacatagcgagcacagaaatagaggaggaaggt
gaaggagatgatgtctatcttatggatatatccagcaatatctctgagaatttaaattac
tacattgatggtaaaattcagtccaacagcagcactagcaattgtgacgtgattcagatg
gagtccaactctgcagacttgtatggattgaattgtatcatcagtccggtcacagtggaa
atttccacgaatttaaaggttacacaaacacatgtgaatgaacctcctaaggaaccctct
agcagtgggagcagtgaatccaaaaagagaagaactgccagccctcctcttgtaccaaaa
ataaaaactgaaatagacccagaacctataactcctactagttctttaaatcttcctctt
agcatttcaacagaaagcataccttttcataaagaaaaaggggtttatttgtcatcaaaa
ttaaagcagcttcttcagacacaggacaataagaagataactccatcaagtgaaatccct
aaaataggaccttctgttacatcatcgtctgttttgcctccagtatccagcaggtttaaa
agaaggaccagctctcctcccagttctccacagcacagtccagtgcttcgagactttgtc
aaatcaggtgagggaaaaaccgtgtggaatgataatattcggagttcaaaaatgccaaag
ttagaaagccacagcaactcacctgcttggagcttgactggaagggaggacaaagagact
ttgagccctcattgctttgaagaatataaaatatcaaaagactggacagcagctccaact
tttggcaacgtgtgcaaccagcagccactggatttatccagcggtatgaaacaaaggtct
gatgtcaaaagcaagactcaggttccctgggaatctgttttagatctaagtgtgcataag
aagccttgcagcgatgctgaaattagggagtacaaagaaaattccacacatccaacgtgt
agtggtgttaagaagaagaaacccaccacttgcatgctgcagaaggttctgctgaacgag
tacaacgggacggatgcagccgcagacagcgcgccgggcacggacagcgccagccccagc
aaggccccggagccccgggccgagcccgacgcggatcccgctctctcggcctcgtcttcc
actgacacccagcccctcagctcctccgcttcccctgtgccacaggcatctgctgcacct
gccgtgtgccagctgcctccattgttaacgcccaccaaccctccctccccgccgccctgc
ctgcccgtgttaacggtggccacgtcaccgcccccactgctcccaacaatgcccttaccg
attccagatgtctctgccagtgccactaacacttcctcctgtccctcgccactctccaac
actactacccagtccccactgccagttctttcacctacggtttctccttctccatcccct
gtcccttctgttgaacctcttatttctgctgcttcacctggcccccctacactgtcttcc
tcatcttcctcctcctcttcctcctctttctcatcctcttcctcctcatcatctccatct
ccacctcctctttctgtagtttcttcagttgtttcctctgctgataaccttgaaagttct
ctcccaataataaaacaggaagaagctgaaagcgagcagcagaaagcgagagaagagcct
catacttcaagtgaatcaggagtagtgcaggaaacgttcaacaagagctttgtgtgcaat
gtctgcgaatcaccttttctttccattaaagacctaaccaagcatttatccattcatgct
gaagaatggcccttcaaatgtgaattctgtgtacagctttttagggataaaacagacttg
tcagaacatcgctttctgcttcatggagtagggaatatctttgtttgttcagtgtgtaaa
aaggaatttgcttttttgtgcaatttgcaacagcatcaacgggatctccatccagacaaa
gagtgcacacatcatgagtttgaaagtgggactttgagaccccagaattttactgacccc
agtaaggcaaacgcagagcacatgcagaacctgccagaagattctttggaaccttcaaaa
gaggaggaagatgaagatctgaatgattcttctgaagagctttatactactataaaaata
atggcttctggagtgaaatctaaagatccagatgtccgcatgggcctcaatcaacactac
ccaagctttaaaccacctccgttccagtatcaccatcgtaatcccatgggtattggagtt
actgcaacaaacttcacaacccataatatcccacagacttttactactgccattcgatgc
acaaaatgtggaaaaagtgttgataacatgcctgagttacacaaacacatactggcctgt
gcatctgctagtgataaaaagagatacacacctaaaaaaaatccagtacccctcaaacag
acagtgcagcctaagaatggcatggtggttattgctgggcctgggaagaacgccttcaga
cgaatgggtcagcctaaaagactcaatttcaatgtggagattagcaaaatgtcctccaat
aaactaaaaataagtgcattgaaaaagaaaaaccagcttgtacagaaagctatcctgcaa
aaaaagaaatctgcccagcagaaggcagaactgaaaaataacccatctgagacagactct
cacatctgcccctactgtaacagagagttcacttacattgggagtttgaacaaacacgca
tcatacagctgccccaaaaaacccatctctccctcctccaaaaagaattcttccaaaaaa
agtgcagcttcttcacctgcaaacagtgacaaaggcagcaaccagcgcaggcgaacagcg
gatgcagaaatcaaaatgcagagcactcagcctcatctgggcaagacgagagcgcgaacc
tcaggacctgcacagctccagctcccctctgcctccttcaagtccaaacaaaacgttaaa
tttgtaccttccatgcgatctaaaaagccaaattcatcttcatccttgaggaactctagt
cctgtaagagtgtctaaaatgtcccatgttgatgggaaaaaaactaaggtggtttctaag
aacaattcctctggaatctccagcaaagcggcccggaaattgcacgtcagaatacaaagg
aataataaagctgttttgccaagtaaatctgctgtggcgagtaagaaaaaggcagacagg
ttcagtgtaaaatctagagagaggattggaggaccaatcacacggagtctgcagcaggca
gcaaatgcagaagcagcagaaaacaaaagagatgaaagcagtacaaagcaagaactgaaa
gatttcaggtaa
DBGET
integrated database retrieval system
