Pyrgilauda ruficollis (rufous-necked snowfinch): 121358488
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Entry
121358488 CDS
T07608
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pruf03037
]
121358488 (NPHP4)
Cilium and associated proteins [BR:
pruf03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121358488 (NPHP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3866
Motif
Other DBs
NCBI-GeneID:
121358488
NCBI-ProteinID:
XP_041332646
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All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MGEWDRVFRQHLPLPPHPQRGRARPPPRSAAFRCALKYLHGAALSQGAEYQLRLSLFDAT
YHHFFGRTWRSSWRAASAAPPRSARATFNEVVYFHTSLNHPGIAAVVEVVKRAGKGDGSS
QHLSCGFGIIPLFHGGSEVTDPATEDRALKLYHGTPRALLHPRFQDPVEKNKYMTVMEKS
HLQYGLKSHQPLEAIFHLLPENLLISGLQTVPGLLPARGDTGDCLQKPRLMKTVTCYLER
LFIQLYPSLEEFEEELLDLLNSDRLLQANSAPDGEEVVVRERRLHVGVHNGLRFVQAPQV
AVLVPVAELSPGRCQGVPSSGARGAGQALVLRSRIQLSEMVPHPAFRVCFQLEYVFCSTG
RAGGKALSGSTRSEAADMRSVRWAVWSPVPGAGDTDVILPLRGGAHRGPCQALVYQTPPS
SRQGKHVESGTVQFHVSTDSEEHLVTAAEILCKDRDESKKPPTPSLKVPAPRRVPVSPRG
PGLSVSQLVASPQSTGQTLQQEGGITHLEADLGSPDAEHCASDQLQALPFTPLQLPMAAV
GLQACSSHVSVSRAALARLHAAGFPDILDLNQEPVEISEPVELGSFNLRLEEADPLQGNE
IVLQFLAFGRDAQDSVEGLWPRTVFLTFQFYRFPPVTTPRLQLVSMDGGLATGLAVPAQL
LVRVNEDGTLTRPPGLQLKYMVDPAFLRPGEQSWFLRYLAEHSLQIDVWDGDSLLHFGSA
AIKLEPLLRQGQTSVRTYHELEVATAEYEPDGTVLGREALRHGALRPLGVRVAVRGRLHL
CLANVGHPCEETPGQLPSHSCIVTEADSTVTTPGGRGYSLNTPGGRRMVWARRLVDVDNE
LEAALRSRRPEGWPKQRTWDLQVIDSYRDHIKGESIYQMLSQAITATRTVHAVLGTAEFF
EFALKNPYSVQHTVTIEVDHPELSVILDPREWRHFKELTKSVTPVEEDMFHLREDLKPQV
YLRPSETVHIPFKYQTFSADPAVVAAQGPAGLGTGANENTHSFGKSGAKQTKLIQVSFQV
SRGKPIALLRVKVEPQPHVVDQTFRFYHPELTFLKKTIRLPPWHTLPGTPVGVPGGQPEM
FVRCSDPDIICETKSLGPGEPQDIFLKVAGGPSPQIKKFFVAIYTDAWLAAPVQIWQFYL
HSLQRLDVACTAGQLTRLSLLLRGTAAPRRVRAFTSHPQELEVDPSGAFLLPANGIQDLY
IGVRPRRAGSKFIYLNLVDVESHQLVSSWLLCLSCRQPLISKAFEISLPAGGGKGCNKRI
TYTNPYPSPRLYFLCTNRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQTVGEEEILIHIND
HEDKNEETFCVKVLYQ
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagtgggaccgggtgttccggcagcacctgccgctgccgccgcacccgcagcgg
ggccgggcccggcccccgccccgctccgccgccttccgctgcgccctcaagtacctgcac
ggcgctgccctctcccagggagccgagtaccagctgcgcctctcccttttcgatgccacc
taccaccacttctttgggaggacgtggaggagcagctggcgagctgccagcgctgccccg
ccgcgctcggccagggcgacgttcaacgaggtcgtttacttccacacctccttgaaccac
cctggcatcgctgctgtcgtggaagtggtaaagagagctgggaaaggggatggcagttct
cagcacctttcctgtggctttggaatcatccccctcttccacggtggatcagaggtgaca
gacccagccactgaggacagagcgctgaagctgtaccatgggacaccacgtgccctactg
cacccacgcttccaggaccctgtggaaaagaacaaatacatgacagtgatggagaagagc
cacctgcagtatggcctgaagtcccaccaacccctggaggctatatttcacctacttcct
gaaaacctgctgatatctgggctgcagactgttcctggcttgctgccggcacgtggagac
acaggcgactgcttgcagaagccccggctgatgaagacggtcacctgctacctggagcgg
cttttcatccagttgtacccttccctggaggagtttgaggaggagctgctggatttactg
aacagtgatcgcttacttcaggctaacagtgcgccagatggtgaggaggtggtggttcgg
gagcggcggctgcacgtcggcgtccacaacggcctgcgctttgtccaggcaccgcaggtc
gctgtgctggtgccagtggcagaactgtcaccaggtcgctgccagggggtgcccagctct
ggagccaggggtgcaggtcaagccctagtgctgaggagccgcatccagctgagtgaaatg
gtgcctcacccagcattcagggtctgcttccagctggaatatgtcttctgcagcacgggg
agagctggtggcaaggccctgtccggcagtactcgcagcgaggcggccgacatgcgctcg
gtgcgctgggctgtctggagccccgtcccgggcgctggtgacacggatgtgatcctgccc
ctgcgtggcggtgcccaccgtggcccctgccaagccctggtctaccagaccccaccgagc
tcccggcaggggaagcacgtggagtctgggactgtccaattccatgtttccactgattcg
gaagaacatcttgtaactgctgcagagatcctatgtaaagacagggacgagtcgaagaag
cctcctacgccatcgctgaaagtgccagccccaaggcgagtgccagtctccccacgggga
ccagggctgtcagtgtcccagctcgtggcctcgccacagagcacaggccaaaccctgcag
caggaagggggcatcacccacctggaggccgacctgggctcgccggacgcagagcactgt
gccagtgaccagctgcaggcactgcccttcaccccgctgcagctgcccatggctgctgtg
gggctgcaggcatgcagttcccacgtgtccgtgtctcgtgccgcgctggcacgcctgcac
gctgccggctttccagacatcctggacctcaaccaggagccagtggaaatctcggagcca
gtggagctgggcagtttcaacctgcggctggaggaagctgaccctctgcaaggcaatgaa
atagtcctgcagttcctggcttttggcagagatgcccaggacagcgtggaggggctgtgg
ccaaggactgtcttcctcaccttccagttctaccgtttcccaccggtcaccacgccccgg
ctgcagctggtcagcatggatggggggctggcaaccgggctggctgtgcctgcacagctc
cttgtccgtgtcaacgaggatgggaccctaaccagaccaccgggcttgcagctgaaatac
atggtggatccagctttcctgaggcccggggagcagagctggttcctgcggtacctggct
gagcacagcctccagattgacgtctgggatggagactccctgctccattttgggtctgct
gccattaaactggagcccctgctgcgccagggccagacgtctgtcaggacctaccacgag
ctggaggtggccacggctgagtacgagccggacgggacggtgctgggccgggaggctctg
cggcacggcgccctgcggcccctcggcgtccgtgtggctgtgaggggccgcctccacctc
tgcctggccaatgttggtcacccatgcgaggagactccagggcagctgccgtcccattcc
tgcattgtcactgaagcagacagcactgtcaccaccccaggtggcagggggtactctctg
aacactcctggtggcaggaggatggtgtgggcacggaggctggtggatgtggacaatgag
ctggaggccgcgctgcgcagtcgccggccagaaggctggccaaagcagcgtacctgggac
ctgcaggtcatcgactcctaccgggatcacatcaagggagagagcatctaccagatgctc
agccaggccatcacagccacccgcactgtccacgctgtgctggggacagctgagttcttt
gagttcgccctgaagaacccgtacagcgtccagcacactgtgaccatcgaggtcgaccac
cctgagctcagtgtcatcctggacccgagggagtggcgccacttcaaggagctgaccaag
agtgttacaccggtggaagaggatatgttccatctccgtgaggacctcaagcctcaggtc
tacctgcgccccagtgagactgtccacatccccttcaaataccagaccttctctgcagac
cctgccgtggttgcagcacaggggccggctggactgggcactggtgccaatgagaacact
cactcctttgggaagagtggggccaagcagacaaagctcatccaggtctccttccaggtg
agcagggggaagcccattgcactcctgcgggtgaaggtggagccacagccccatgtggtg
gaccagacctttcgcttctaccacccagagctcaccttcctgaagaaaaccattcggctg
cctccctggcacaccctccctggcacgccagtgggggtgccgggagggcagcctgagatg
tttgttcgctgcagtgaccccgacatcatttgtgaaaccaaatccttggggcctggcgag
ccacaggacatctttctcaaagtagccggaggaccaagcccgcagatcaaaaaattcttt
gttgctatttatacggacgcctggctggcagcacctgtccagatctggcagttctacctg
cactctctgcagcgcctggacgtcgcctgcacggccgggcagctcacgcgcctctccctg
ctgctgcgcggcaccgcggccccgcggagggtgcgcgccttcacctcccacccccaggag
ctggaggtggatcccagcggtgccttcctcctccctgccaatggcattcaggacctgtac
atcggtgtgaggccacggcgggctggcagcaagttcatctacctcaacctggtggatgtg
gagtcccaccagctggtgtcctcctggctgctctgcctgtcctgcagacagcctctcatc
tccaaggcctttgagatctctctgcctgcgggaggtgggaaaggctgcaacaagcgcatc
acctacaccaacccctacccctcaccccgcctctacttcttgtgcaccaaccgccctgac
ctgctgcaattcaaggaggactccttcgaggtggccggaggggaggtgtacaccatcggc
ctgcgcttcgccccgagccagactgtgggggaggaggagatcctgattcacatcaatgac
cacgaggacaagaacgaggagaccttctgtgtgaaggtcctgtaccagtga
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