Pyrgilauda ruficollis (rufous-necked snowfinch): 121358612
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Entry
121358612 CDS
T07608
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121358612 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pruf04812
]
121358612 (SPAST)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
121358612 (SPAST)
Membrane trafficking [BR:
pruf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121358612 (SPAST)
Cytoskeleton proteins [BR:
pruf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
121358612 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_14
MIT
IstB_IS21
AAA_24
DUF815
NPHP3_N
AbLIM_anchor
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
121358612
NCBI-ProteinID:
XP_041332894
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MNSPGGRGKKKGSAGSSSAPPTAGASPSSPPGPAPPVPPAGAAAAASPHKRNLYYFSYPL
FAAFALLRFVAFQLGLLFAWLCERLSRGALMAAKGSRAGAGDAPEPGGAPETVRACHKRA
FECISMALRIDEDETAGQKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSKMMT
NLAMAKDRLQLLEKLQAVLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTS
NSLPRSKTVAKSGSTGLSGHHRTPSYSGVSSSVSRPAPNPTPSAHKTVPKNSRTNKPSTP
TTAPRKKKDTKIFRNVDSNLANLILNEVVDSGPAVKFDDIAGQELAKQALQEIVILPSLR
PELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVR
ALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMG
ATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGY
SGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEAY
IRWNKDFGDTTV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggccgagggaagaagaagggctcagccggctccagttccgcgcct
ccgaccgccggcgcctctccctcctcgccgcccgggccggcgccccccgtgccgccggcg
ggggcggcggcggcggcgtccccgcacaagcggaacctgtactacttctcgtacccgctc
ttcgccgctttcgccctgctccgcttcgtagccttccagctcgggctgctctttgcctgg
ctctgcgagcgcctctcccgcggcgccctcatggccgccaagggcagcagggccggggcc
ggcgacgcgcccgagcccggcggggcgcccgagacggtgcgggcgtgccacaagcgggcc
ttcgagtgcatctccatggctctgcgcatcgacgaggacgagacagcaggacaaaaggaa
caagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtctta
gtaattggtcaaggtgatcagtgtgaacgggctcgacgtctccaatctaaaatgatgaca
aatttggcaatggccaaggatcggttgcagcttttagagaagctgcaggcagttttgcaa
atttccaagccgcaaatggaggtctataatgacagtactaacctggcatgccgcaatgga
catctccagtcagaaagtggagcagttccaaaaaagaaggaccccctaacacacacaagt
aattcccttcctcgctcaaagactgttgcaaaatccggatccacaggcctttcaggtcac
cacagaacgcccagctacagtggggtatcatcatctgtgtctagaccagcacctaatcct
acaccttcagctcacaagactgtccctaaaaatagcagaaccaataagccttctactcct
accactgctcctcgaaaaaagaaagacacaaagatatttagaaatgtggacagcaatctt
gctaatcttatcctaaatgaagttgttgatagtgggccagctgtcaaatttgatgacatc
gcagggcaggaactggctaaacaagctttgcaagaaattgttatccttccttctcttaga
cctgagttatttacaggtctgagagctcctgcacgtggtttattgctgtttggcccacca
ggaaatgggaagaccatgttggccaaagcagttgctgcagaatcaaatgctactttcttt
aacatcagtgcagcgagtctgacttcaaaatatgtgggtgaaggggagaaactggtgcgt
gctctatttgcagtagccagagaacttcaaccttctataatttttattgatgaagttgat
agccttttgtgtgaaagacgagaaggtgaacatgatgctagcaggcgtctaaaaacagaa
tttttaatagaatttgatggtgtgcagtcttctggagaggacagaatacttgtgatggga
gcaacaaacaggcctcaggagcttgatgatgctgttctcagacgcttcaccaaacgggta
tatgtgtctttaccaaacgaggagacaagattgattttgctaaaaaatcttctaagcaag
caaggaagtccattaacccaaaaagagttggctcaactagctagaatgacagatggatac
tctggaagtgacctaactgcattagcaaaggatgcagcactaggccccattcgagaatta
aaaccagaacaggtgaagaacatgtctgccagtgagatgagaaatatcaagctgtcagac
ttcacagaatctctgaagaagatcaagcgcagtttgagccctcagaccctggaagcgtac
attcgctggaacaaggactttggagataccaccgtgtga
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