KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121358612
Entry
121358612         CDS       T07608                                 
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
  KO
K13254  spastin [EC:5.6.1.1]
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pruf04131]
    121358612 (SPAST)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pruf04812]
    121358612 (SPAST)
Enzymes [BR:pruf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     121358612 (SPAST)
Membrane trafficking [BR:pruf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    121358612 (SPAST)
Cytoskeleton proteins [BR:pruf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     121358612 (SPAST)
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N Vps4_C AAA_22 AAA_5 TIP49 Mg_chelatase AAA_16 AAA_14 MIT IstB_IS21 AAA_24 DUF815 NPHP3_N AbLIM_anchor nSTAND3 AAA_2
Other DBs
NCBI-GeneID: 121358612
NCBI-ProteinID: XP_041332894
LinkDB
Position
Unknown
AA seq 612 aa
MNSPGGRGKKKGSAGSSSAPPTAGASPSSPPGPAPPVPPAGAAAAASPHKRNLYYFSYPL
FAAFALLRFVAFQLGLLFAWLCERLSRGALMAAKGSRAGAGDAPEPGGAPETVRACHKRA
FECISMALRIDEDETAGQKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSKMMT
NLAMAKDRLQLLEKLQAVLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTS
NSLPRSKTVAKSGSTGLSGHHRTPSYSGVSSSVSRPAPNPTPSAHKTVPKNSRTNKPSTP
TTAPRKKKDTKIFRNVDSNLANLILNEVVDSGPAVKFDDIAGQELAKQALQEIVILPSLR
PELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVR
ALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMG
ATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGY
SGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEAY
IRWNKDFGDTTV
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgaattctccgggtggccgagggaagaagaagggctcagccggctccagttccgcgcct
ccgaccgccggcgcctctccctcctcgccgcccgggccggcgccccccgtgccgccggcg
ggggcggcggcggcggcgtccccgcacaagcggaacctgtactacttctcgtacccgctc
ttcgccgctttcgccctgctccgcttcgtagccttccagctcgggctgctctttgcctgg
ctctgcgagcgcctctcccgcggcgccctcatggccgccaagggcagcagggccggggcc
ggcgacgcgcccgagcccggcggggcgcccgagacggtgcgggcgtgccacaagcgggcc
ttcgagtgcatctccatggctctgcgcatcgacgaggacgagacagcaggacaaaaggaa
caagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtctta
gtaattggtcaaggtgatcagtgtgaacgggctcgacgtctccaatctaaaatgatgaca
aatttggcaatggccaaggatcggttgcagcttttagagaagctgcaggcagttttgcaa
atttccaagccgcaaatggaggtctataatgacagtactaacctggcatgccgcaatgga
catctccagtcagaaagtggagcagttccaaaaaagaaggaccccctaacacacacaagt
aattcccttcctcgctcaaagactgttgcaaaatccggatccacaggcctttcaggtcac
cacagaacgcccagctacagtggggtatcatcatctgtgtctagaccagcacctaatcct
acaccttcagctcacaagactgtccctaaaaatagcagaaccaataagccttctactcct
accactgctcctcgaaaaaagaaagacacaaagatatttagaaatgtggacagcaatctt
gctaatcttatcctaaatgaagttgttgatagtgggccagctgtcaaatttgatgacatc
gcagggcaggaactggctaaacaagctttgcaagaaattgttatccttccttctcttaga
cctgagttatttacaggtctgagagctcctgcacgtggtttattgctgtttggcccacca
ggaaatgggaagaccatgttggccaaagcagttgctgcagaatcaaatgctactttcttt
aacatcagtgcagcgagtctgacttcaaaatatgtgggtgaaggggagaaactggtgcgt
gctctatttgcagtagccagagaacttcaaccttctataatttttattgatgaagttgat
agccttttgtgtgaaagacgagaaggtgaacatgatgctagcaggcgtctaaaaacagaa
tttttaatagaatttgatggtgtgcagtcttctggagaggacagaatacttgtgatggga
gcaacaaacaggcctcaggagcttgatgatgctgttctcagacgcttcaccaaacgggta
tatgtgtctttaccaaacgaggagacaagattgattttgctaaaaaatcttctaagcaag
caaggaagtccattaacccaaaaagagttggctcaactagctagaatgacagatggatac
tctggaagtgacctaactgcattagcaaaggatgcagcactaggccccattcgagaatta
aaaccagaacaggtgaagaacatgtctgccagtgagatgagaaatatcaagctgtcagac
ttcacagaatctctgaagaagatcaagcgcagtttgagccctcagaccctggaagcgtac
attcgctggaacaaggactttggagataccaccgtgtga

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