Pyrgilauda ruficollis (rufous-necked snowfinch): 121358777
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Entry
121358777 CDS
T07608
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121358777 (TRERF1)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
121358777 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Zn_SUZ12
zf-C2H2_2
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
121358777
NCBI-ProteinID:
XP_041333159
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MGDQQLYKTNHTANNNENLYYEQHQMNSLPSLNHSYGTSVMDAPQASPLSPPFPQDSRDS
IALPVGSKSLGSMDTSRQTSWTHSGSGNHVPARNSLNNQSAMWSPLGQGESHDGYQYSYP
QPSENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTEPSMVDNSGDSALRQLL
SQKPAVEQQPVASTIQRYQPVPQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SAFQQGQAHVPQMQSQQLLPQQMQHLQQPQYYAQPQQGHQRLSLQEIQQQPPARQQRQCP
VQIAQYYQTQPVMQQLQQQQQQMQLPLPPYHREPDPKTMHEPHQYSQDPSHPVQLIQLGA
VPQYCFQDPHEQYRHLYPQSLLQQQQQDQQKQYLSESRVPSLNSHIGLTPPDTAEDPARQ
EINSVGNAVPHRTLLPPSGVHLNNKSSQQDSPSTTWPQIQLSDGRLQPLSPEQSGQNRET
LPERADAKNKLMCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLSKEVD
GLAPIVMPVSVPVKLLSPEPSTQPSASTATVTDKPANSVSDDEMPVLVKMTYSPPCSPKV
ANPCSSSETSKKPHPSAVKSEESFKPLQDKKKYRHRPEPLFIPPPSFNLSMSHSGATLYQ
SQLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVLTSHTTSHAQLPLTPLTP
TPRVLLCRSNSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDVHKATL
VWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALEKLLLR
KPVRLKCHPLSNYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQCVEYYY
TWKKILRLGRKHRTRLEKKRDECLTSGEEEVLEEDEDIEEDRKEEREMQKSPDPPAISLV
GPIDLPAVQGLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKTRCTIPGTKQ
KSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGRVFFKIKSRNAHMKTHRQQEEQQR
QKAQKAAVAAEMAATIARTTGPAGHSLIPLDHMSLVKHVENVGDIDDDVVPDLGDVMEEN
EVMDADLLLDDEDPDLLQDDAEL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcagttgtacaaaactaatcatactgccaacaacaatgagaacttgtac
tacgaacaacaccaaatgaactcccttccatctctaaatcatagctatgggacatctgtt
atggatgctccccaggcgtcccccctctcccctccatttccccaagattcaagggacagt
atagctttgcctgtaggttcaaaaagtcttgggtcgatggatacatctagacaaaccagt
tggacacattctggctcaggaaaccatgtcccagcgaggaacagtttgaataatcaaagc
gcaatgtggagccccctcgggcagggggagtcccatgacggataccaatattcttaccca
caacccagtgaaaaccgatcgcaaaaaattaccagtggggtcctgcacaaattggactcc
tttacacaagtatttgctaaccaaaatctgagaattcaagtcaacaacatggctcaggtt
ctgcacaccgagccttcgatggtggataattctggtgacagtgcgctcaggcagctgctg
tcccagaagccggcggttgagcaacaacccgtagcttccaccatacagagataccaacca
gtgccacagcaaacgcaccagaattttgcaagcacacagcaaaagcaacaaatgcaagtc
atgcagcaccaacagttgtactacgactaccagcagcacttatcacagatgcagatgcat
tctgcgttccagcagggccaggcgcacgttccgcaaatgcagtcccagcagctcctaccg
caacagatgcagcacttgcagcagcctcagtactacgctcagccccagcagggacaccag
cggctctcgctccaggagatccagcagcagcctccggctcggcagcagcggcagtgtcca
gtgcagatcgctcagtattaccaaacacagcctgtcatgcagcagttacagcagcagcag
cagcagatgcaattgccgctccctccgtatcacagggaacctgatccaaagactatgcat
gagccacaccagtactctcaggatcccagtcatcctgtgcagcttatccagttgggagca
gtgcctcagtattgcttccaggatccccacgaacagtacaggcacttgtacccccagagt
ttactgcagcagcagcagcaagatcagcagaagcagtacctgagtgagagcagagtgcca
tccctgaactcccacattggcctcactccgccagataccgctgaggatcccgcacggcag
gagattaattctgtaggtaatgctgtccctcatcgaactcttttgccaccctcgggagtt
catctgaacaacaaaagctctcagcaagactctcccagcaccacgtggcctcagatacaa
ctgtcagatggcagactgcagccactgtccccagaacaaagtggccagaacagagaaaca
cttcctgagagagctgatgcgaagaacaagctaatgtgttcaatatgcttgaaggaattt
aagagtttgcctgctctaaatggtcacatgaggtcacacggaggagtaagagcatctcct
aacttcaaacaggatgaaggagagaaaccaccacagcagccgctgtctaaagaggtggat
ggcctcgcgcccatcgtcatgccagtgtctgtccctgtaaagcttctgtcacctgagccc
agcacgcagccctctgccagcactgccacagtcacagacaagcctgccaactctgtgtca
gatgacgagatgcccgttctcgtgaagatgacttactctccaccgtgcagtccaaaagtg
gccaacccctgctcatcctctgaaactagcaaaaaacctcatccaagtgctgtaaaatcg
gaagaaagcttcaaaccattgcaggacaagaagaagtatcggcacagacctgaacctctc
ttcatacctcctccttccttcaacctcagcatgtcccactcaggtgccactctgtaccag
agccagcttcgctctccccgtgttctgggggatcacctgctggaccggacacacgagctg
cccccctacactccgccgccgatgctcagtcccgtccggcaagggtctggtctcttcagc
agtgttctcacttctcacaccacatcacatgctcagctgccacttactccactgacaccc
actccacgtgtgctcctctgtcggtctaatagtattgatggaagtgtcattccggtgacg
cctgggcctggagaacagactgttgaaccgcgaatcaatattgggtccaggttccaggct
gacattcctgagctgcaggacagattgctaatggagaaagatgtgcacaaggctactttg
gtttggaaaccatggccagaactggagaacaaagtcttccaacaaagagtggaagacctt
ttaaatatgagctgttccagtgtgttacctggtggaggaactaactcagaatacgctttg
cactctctctttgaagcaaaaggagatattatggttgctcttgaaaagctgctgttgaga
aagccagtgaggttgaagtgtcatcctttgtcaaattaccactatgccggctctgacaaa
tggacacatcaagaaagaagattgttcaaagaggcattgtccacctacagcaaagatttc
atatttgtacagaaaatggttaagtctaagacagttgcacaatgtgtggaatactactat
acctggaagaaaatcttgcgtttgggacggaaacacagaacgcgcttagagaagaaaaga
gatgaatgcttgacaagtggagaagaggaagtgttagaggaagatgaagatattgaagaa
gacagaaaggaagaaagggaaatgcagaagtcacctgacccaccagcaatctctcttgtt
ggacctatagatctacctgccgttcagggtctttcactgtcttcatcctccttcatctgt
gaaatgccaaactgtggcgctgtgttcagttcccgacaagcgctgaatggccacgctcgc
attcacggaggtacaaaccaggtgacgaaaacacgctgcaccattcctggcacgaagcag
aaatctggtacgcagagcggatactgctccatcaagagctcacctgcccacagcacaaca
agcggcgagaccgacccaacgacaatatttccttgcaaggagtgtggcagggtctttttc
aaaatcaaaagccgcaatgctcatatgaagactcacagacaacaagaagaacagcaaagg
cagaaggctcagaaagctgctgtagcagcagaaatggcagccactattgcaagaactact
gggccagctgggcatagtttgatccccctggatcacatgagcttggttaaacatgttgaa
aatgttggtgacattgatgatgatgttgttccggatctgggtgatgttatggaagagaac
gaagtcatggatgctgacctcttactggatgatgaagatccagatctactgcaggatgat
gctgagttgtaa
DBGET
integrated database retrieval system
