Pyrgilauda ruficollis (rufous-necked snowfinch): 121358902
Help
Entry
121358902 CDS
T07608
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121358902 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121358902 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121358902 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pruf00535
]
121358902 (COL9A1)
Proteoglycans [BR:
pruf00535
]
Extracellular matrix (ECM) proteoglycans
Others
121358902 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
121358902
NCBI-ProteinID:
XP_041333407
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MKSHWKITAFFYLCSFLWSFISATIQHQSRLPAILGASHRIDICPTIRIGQDDLPGFDLI
SQFQIEKAASQGIIERVVGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVHLNGQMKSVEFSYKGADGRHQTASFLHLPFLFDSQW
HKLMIIVEANSVTLFIDCIKIESLNIKPKGKINTDGFAVLGKLKNNPQISVPFEIQWMVI
HCDPLRPQREGCGELPARVTQTGIERGPPGPPGPPGPPGPPGVPGIDGIDGERGPKGPPG
SPGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGAPGPKGQKGEPGLPGARGLPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGLPGPPGPPGTIGLQDGDLLCPSACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGT
KGARGLDGDPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGPKGEPGLPGV
DGREGIPGMPGAKGEPGKPGAPGDTGLQGLPGFPGSPGMKGIPGPKGNKGPPGVPGLMGN
PGKQGQQGPEGEAGPTGPRGPPGSRGETGPAGPPGLPGKLGPQGSIGLPGLPGPPGLPGG
KGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGDSGSRGPEGSRGL
PGMEGPRGSPGPRGLQGEQGAPGLPGSEGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLR
RPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE
RGFPGRGLKGYPGPRGLPGEPGKASYGREGRDGDRGVPGVAGQPGVPGPPGPPGPPGYCE
PASCRMQAGQRAGKNVKGP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccactggaaaattacagctttcttttacctgtgtagttttctgtggtctttc
atctcagccaccatccagcaccaatcaagactaccagctattctgggtgccagtcacaga
attgatatctgcccaacaatcaggattggccaagatgacctaccaggttttgacctgatt
tctcagtttcaaatagaaaaagctgcttcccaaggaattattgagagagtagtgggatcc
acttctctacaagtagcttataaattgggacccaatgtagacttcaggataccaaccagt
gccatatattccaacggcttgcctgatgaatattcctttctaaccacttttcggatgact
ggggccacacttcagaaatactggactatttggcagattcaggattcttcgggaaaagaa
caagttggagtgcatctcaatggtcaaatgaaaagtgttgagttttcttataaaggagca
gatggaagacaccaaacagcatcatttttacatttgcctttcttgtttgactcccaatgg
cacaagcttatgataattgtggaagcaaacagtgtcacactttttatagactgtattaaa
atagaatccttaaacataaaaccaaaagggaaaatcaacactgatggctttgctgtgctt
ggaaaacttaaaaataatcctcaaatttcagttccgttcgagatccagtggatggtgatc
cactgcgaccccctgcgaccccagcgcgaaggctgcggcgagctgccggctcgggtaacc
cagacgggaatcgagagaggcccccctggtccaccaggccccccaggtccaccagggcca
ccaggagttcccggtattgatggcattgatggggagagaggcccgaagggccctcctggt
tcaccgggtccagatggggatgcaggcaaaccaggatcccctgggttgcctggagagccg
ggagctgatggattcacaggacctgatggctctcgtggagccccaggaccaaaaggacag
aagggggagccaggactgccaggtgctcgtggacttccaggcaagggccttcttgggcca
cctggtccagctggtgcagcaggacttcctggggaagtaggtcgtgctggtccacctgga
gatccaggaaaaagagggccaccagggctaccaggacctccgggtcctccaggaacgatt
ggcctgcaagatggcgacctgttgtgtcccagtgcttgtcctcctggccgcccaggacat
gctggcttaatgggtatgaaggggcaaaaaggttcaaaaggagagtctggtgaaccagga
aaacaaggttataagggtgaagaaggggaccaaggacctagtggtgaagtgggagctcaa
ggccctccaggcattctaggtatcagaggtataactggtataatgggacctaaaggtacc
aaaggagctcgtggtcttgatggtgatcctggtccccaaggtcttcctggtgcacctggg
gatcaaggacagagaggtccactaggagaggcaggtccaaagggagaaaggggtcctcaa
ggtacaagaggaataaatggcctccctggacctaaaggagagcctggtttaccaggagtt
gatggccgtgaagggatccctggcatgcctggagctaaaggtgaaccaggaaaacctgga
gctccaggtgatacagggctccagggattgccaggtttcccaggctctccaggtatgaaa
ggcattcctggcccaaagggtaataaaggtcctcctggggtgccagggttaatgggaaat
cctggtaaacagggtcagcagggcccagagggagaagcaggtccaacaggaccccgggga
ccaccaggtagcagaggggagacaggtcctgcaggtcctccaggtttaccagggaagttg
ggtccccagggtagtattggacttcctggactgcctggtcctccaggccttcctggtggt
aaaggtgaccggggttcggtgggtgaaccagggcctaagggtgaacaaggtgcacctgga
gcagaaggagatggaggagaaaagggtgacttaggtgacatgggattaccaggagcaaag
ggagctgttggtaatcccggagactccggttcccgtgggcctgagggaagtcggggactg
cctggcatggaagggccacgtggctcacctggaccacgaggcttgcagggtgagcagggt
gcccccggcctgcctggcagcgaaggtccagctggaaaagaaccaagcgatcagcacatt
aagcaggtttgcatgagagtcatgcaagaacaattagctcagctggcagccagccttagg
aggccagaatttggtgctccaggtcttcctggccgaccagggccaccaggtgctccagga
cctgctggtgaaaacggtttcccaggacagcttggcccccgtggtctgcctggccttaaa
ggtccccctggtgagattggtcgtaaaggtccgaaaggtgagccaggagaaagaggagaa
agaggatttccaggcagaggactgaaaggttatcctggaccaagaggtcttccaggtgaa
ccaggcaaagccagctacggcagggagggccgtgacggtgaccgaggtgtccctggggtg
gccgggcagccgggggttcccggcccccccggcccgcccggccctcccgggtactgcgag
cccgcgtcctgcaggatgcaggcgggacagagagccgggaagaacgtgaaagggccctga
DBGET
integrated database retrieval system
