Pyrgilauda ruficollis (rufous-necked snowfinch): 121358986
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Entry
121358986 CDS
T07608
Symbol
LAMA1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121358986 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121358986 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121358986 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_G_1
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
121358986
NCBI-ProteinID:
XP_041333534
LinkDB
All DBs
Position
Unknown
AA seq
3002 aa
AA seq
DB search
MGSGGRRLLLALLAATSLLWVPGQGQPRGLFPAILNLASNAHISTNATCGEKGPEMFCKL
VEHVPGRPLRNAQCRVCDSHSANPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWVTITLD
LRQVFQVAYVIIKAANAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITPRIGPP
TYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARYIRLRLQRIR
TLNADLMTLSHNDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKKLQCQC
EHNTCGESCNKCCPGYHQKPWRPGTLSAGNKCEKCNCHNKTEDCYYNQSIADQKRSMDIH
GQFIGGGVCLNCTQHTTGINCEMCADGYFRPHKVSPYEDHPCYPCDCDPFGSLSSVCVKD
EHHSNSQRGTWPGQCQCREGYAGEKCDHCAFGYRGYPNCLRCNCSLVGSINEDPCTEPCL
CKENVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVCDSLTWPVSQISDMTGWLVTD
LYKARSVQPQRSQFDGPHQISINNTEAVKVLKNTYYWSAPEAYLGNKLTAFSGDLKYTVS
YDIPMESVDSDIVSSVDVIIQGNGQILSTRAAGLSLQPYEEYSNSVRLVSDNFIEFNTKK
AIDREMLMTVLANVTHLLIRANYNIAKKAVYRLDSVTLDTANANVIDLSSAPDVEFCECP
QGYTGLSCESCLPGYYRVDGILFGGICQPCKCNGHATECDIHGVCFACQHNTTGPFCDQC
LPGFYGNPSQGTSEDCRPCACPLSSSANNFSPTCQLSEEGGIVCDKCLPGYTGSQCERCA
NGYYGNPLMAGQSCAPCECNGNVNPQEEGHCDPFTGQCLKCLGNTAGHHCEKCADGYYGD
AVIDKNCRACACHVNGSLSSTCQHETGICSCKSNVIGERCDKCLNGYYGLLTGLGCVPCN
CSQFGSVSEDCNHQGQCHCVPGVAGEKCDRCAHGFYAFQDGGCTPCDCAHTQNNCNADSG
QCICPPHTQGQKCELCEENYWGLSPKLGCQACNCSSAGSANPQCDVLTGQCQCKTEFGGR
DCSRCALGYRDYPDCVACDCDLSGTKAETCNGTEGVCGCEEETGVCSCKENVFGLQCSEC
KPGTFGLSASSALGCTPCFCFGMSTSCSELEDHVRIPITLTPDQAILHVVAQSNLTGTVE
GVFSQFPDVLLDAAIVRKYLNTETFYWKLPEQFQGDQLMAYGGKLRYTVAFYALDGFGTS
NFEPQILMKGGHTSKLVIYADIPSPENGVRTDKEVEMKEDSWKYFNSVSDEPVLRSDFMS
VLSNVEYILIKAAYGQGLQQSRIANISMEIAVKFEEMHLGRPLAHLVEQCRCPAGYTGLS
CQSCAPGYYRGKHTELSVRELHTLIAPCVPCQCNNHSETCDPDTGKCLDCRDNTVGDHCS
ACAPGYYGKVTGSANDCSPCACPRANPASFSPTCVLKGVHDYHCDACLPGYEGQYCERCS
PGYYGAPRLPGGSCRPCQCNPGGSIHGNCDGATGQCLCKPGVTGQLCEECEPRHLLLEDE
CVSCDDNCTGVLLSSLDNLDEAMLSVNLTGIDRVPYGILSELENATEHLKRSIVPREDPT
YSLDTTKENLLNLSGGIDYLHEETTRFLKKAQQLDTMTQKTRNKSQELTGFIDTVHTTIK
VLAEVVLSLNETLGLDLPLSNAASQSLQDDISALLDALRKKDFVQQHHNATTVLKAAEKL
LTQVQKEYFKPQQELAELKRNASQFLSKQSSRLQDAQDLVNEALANINETRRLFPLISSN
LAELNDKKLKIKEGEEISTMLIKEGKVLLNDAAALAQDVKNSTFNVEVHQNGLVLWSTKL
RHHVDELVMKMSVRGVLDLVYRAEEHATQFQRLADALESDLSRVRNVTLNTTAAIYTHSS
VQSVIERTESLADDASRVVSAPLDLVKESFSLLGKETLLLSSKFQNEATNLKKKSDGLLF
GLNGLNKKVEKIRESTNKIGNQLNDSLLTLRALHNNARKHMLEVKELAVSANTSAVVDLS
HFGEFSQKLMNTSSTLSQVNDTLRKTSELITDSSKAAYTAEKQVKEVEAQASLLLDRLKP
LKMLEENLNRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNTLTLNVK
TAEPDNLLFYLGSNGAQLLVPCGTLSWDSIFHRLVSVCVHVCVYIXREGKCNGCFGSPQD
EDTSFHFDGSGYSVVEKALRSTLTQILISFSTFSPNGLLLYLSSNGTRDFLSLELVDGKV
RVTVDLGSGPLALTTENRYNNGTWYKISFNRNKKQGILTVMDAYNLNYKETKQGESPGVA
SDLNRSDKDPIFIGGLPRSRALRKGLNSRMYVGCIKNLEISRSTFDLLRNSYGVRKGCVL
EPIHSVSIMNNGYIELVPKSLSPESELMATFATKNSSGIILAGLSRGLEKRQRRQAHLPF
FSIMLIDGHLAVHVNAGDRASTRKVVLQSANGTYSDGQEHSVILIRNKRIITVQVDESKP
AELRLGSAAENSPINISNFYAGGIPAGEGILGLKLAGSFHGCISNLIFNKELLYFTTSMK
YEHVDMDSCFLSEKPKTALQPSDIVIQPELQALPVPLRPLTDTKKVVCAKDELPGHVQGA
HQFGLAKGSHLTLLFNQSAVRKKLSIQLNLRTFSSTGLIYYMAHQNQVDYAALQLYGGQL
HFSFDLGKGKAVALHPAVVSDGKWHTVKTEYVKRKGTIIVDGQELVAVNALGDGSTLDVE
GKLYVGGLPLDYVPKNLGNVTHSIPACIGSMTINGKQLDNESPVSIFAVNKCYETVQDGT
FFDGSGFAALVREGYKVRSDVNISLEFRTTAVHGVLLGVSSAKVDAIGLEIVHGKVLFHV
NNGAGRITASYEPRGTNGLCDGKWHKLQANKSKHHISLIIDGNLVHTDNPYVQSTSADTN
NPIYVGGYPADVKQNCLTSKSSFRGCLRNLVLTKGQHTELFDFSRAFDLRGVFPHSCPGA
EH
NT seq
9009 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcggcgggcggcggctgctgctggcactgctggcggcgacttcgctgctgtgg
gtgccggggcagggccagccccgaggcctgtttcctgccattttgaacctggccagcaat
gctcacatctccaccaatgccacctgtggggagaagggaccagagatgttctgcaaactg
gtggagcacgttcccggccggcccctgcgcaatgcccagtgccgcgtctgtgacagtcac
agtgccaatcccaaagaacagcacccaatttccagtgcaatcgatggtaccaataactgg
tggcagagtcccagcattcagaatggaaggcaataccactgggtcaccatcaccttggat
ttaaggcaggtctttcaagttgcatatgtcatcatcaaagctgctaatgctccacgacct
ggaaactggattttggaacgctccatagatggcacggagttcagaccatggcagtactat
gcaattagcgatactgaatgtttaactcgttacaatattacaccaagaattgggccgcca
acttacaagagggacgatgaagtgatctgcacctcctattattccagactagttcccctg
gaacacggagagattcatacatcactgatcaatggtaggcctagtgctgatgatccttca
cagaagctgttggaatttacgtctgcacgatacattcgcctgcgactgcagcgtattaga
actctgaatgctgacctcatgactctcagccataatgatcctaaggaactagaccccatt
gttaccagaaggtactactattcaataaaggacatctctgttggtggcatgtgtatttgt
tatggccacgctcgaagctgccctttggatgaaatcacaaagaaattgcagtgccagtgt
gaacacaacacatgtggagagagctgtaacaagtgctgtccaggctatcaccagaaacca
tggagaccaggaaccctttctgctgggaacaaatgcgagaaatgtaactgtcataacaaa
acagaagattgctattacaaccagagtattgcagatcagaaaaggagcatggatattcat
ggacagtttataggaggtggtgtgtgtttaaactgtactcaacatactactgggatcaac
tgtgaaatgtgtgctgatggatattttagaccacacaaagtttctccctatgaggatcac
ccctgctatccctgtgactgcgacccttttggctctctgagttctgtctgtgttaaagat
gagcaccattctaactcccagcgtggcacttggccaggccagtgccagtgcagggaaggt
tatgcaggagaaaaatgtgatcattgtgcatttgggtatcggggttacccaaactgcctg
cgctgtaactgcagcctggttggtagcatcaatgaagatccatgcacggagccttgtctt
tgcaaagaaaatgtagaaggtgaaaactgtgatctctgtaaaccaggattctacaatttg
caagaaagaaatcctcaaggctgcacggagtgtttttgctttggtgtttctgatgtctgt
gacagtcttacatggcctgtcagtcagatttcagacatgactggatggcttgttactgat
ctgtacaaagcaagaagtgtacagcctcagcgaagccaatttgatggaccccatcaaata
agtattaacaacactgaggctgtgaaagtactgaaaaatacttattactggtcagcacct
gaggcatatctaggaaataaactcacagcttttagtggagacttgaagtatacggtatcc
tatgacattccaatggagagtgtggacagtgatatagtgtctagtgtggatgtcatcatt
cagggtaacgggcagattctgagtacaagagcagcgggcttgtcattacagccatatgag
gagtattctaattcagtgagacttgtatcagacaatttcatagagtttaataccaaaaaa
gcaatagaccgagaaatgttgatgactgttctggcaaatgtgacccatcttctgatcagg
gccaactacaacattgccaaaaaggctgtgtacaggctggactctgtgaccttggatact
gcaaatgcaaatgttatagatctctcttcagcaccagatgtggaattctgtgaatgtcct
cagggttacacaggattatcctgcgagtcctgtctccctgggtactaccgtgtggatgga
atactctttggaggtatttgtcagccctgcaagtgcaatgggcatgcaactgagtgtgac
attcacggtgtttgctttgcttgtcaacacaacacaacaggacctttctgtgatcagtgc
ttgcctggcttctatggaaatccatcccaaggaacatctgaggactgccggccctgcgca
tgtcctctgagttcttctgcaaacaatttcagtcccacttgccagctgagtgaggaaggt
ggaattgtctgtgacaaatgtcttccaggctatactggttctcaatgtgaaaggtgtgct
aatggttactatgggaatcctcttatggctggacagtcgtgtgctccttgtgaatgcaat
ggcaatgtcaaccctcaggaagagggccactgtgatcccttcacaggacagtgcctgaaa
tgtctggggaacacagcaggtcaccactgtgaaaagtgtgctgatgggtattatggggat
gcagtgattgacaaaaactgtcgtgcctgtgcctgccacgtgaatggttccctttcaagt
acttgtcaacacgagacaggcatctgctcctgcaaatcaaatgtaattggagaaagatgt
gataaatgcttgaatggatattatgggctgcttactgggcttggctgtgttccctgcaac
tgcagtcagtttggctctgtgtccgaggactgcaatcatcaggggcagtgtcactgtgtg
ccaggagtggctggagagaagtgtgaccgttgtgctcatggcttttacgcattccaggat
ggtggctgcacaccctgtgactgtgcccatactcagaacaactgtaatgctgattctggc
caatgcatttgcccccctcacactcagggacaaaagtgtgaactctgtgaagaaaattac
tggggactctctcctaaacttggttgccaggcttgcaactgtagcagcgctggttcagcc
aatccccagtgcgatgtgttgacaggtcaatgccagtgcaaaactgaatttggaggacga
gactgttccaggtgtgccttgggctacagggactacccggactgtgttgcctgtgactgt
gatttgagtggaaccaaagcagagacgtgcaacggcaccgaaggagtttgtggttgtgaa
gaagaaactggcgtgtgttcctgcaaggaaaatgtttttggtctacaatgcagtgagtgt
aaacctggaacttttggtctgtctgctagcagtgcactaggatgtactccgtgcttctgt
tttgggatgtccacatcttgttcagaactagaagaccacgtgagaattcctataacatta
actccagatcaggctattctgcatgtagtagctcaaagtaacctgactggaacagtggaa
ggagtattttcacaatttcctgatgttttattggatgctgccatagtcagaaaatactta
aatacagaaacattttactggaagttgccagagcagtttcagggagaccagctcatggcc
tatggagggaagctgagatatactgttgccttttatgctttggatggctttggaacctca
aattttgagccacagattctaatgaaaggaggtcacaccagcaagttggtcatctatgca
gacatcccgtctccagaaaatggagtaagaactgacaaggaagtagaaatgaaggaggat
tcttggaagtattttaactctgtgtctgatgaacctgtcttacgttctgacttcatgtct
gtgctcagcaatgttgaatacatccttatcaaggcagcttatggccaaggattacagcaa
agcagaattgcaaatatctcaatggaaattgcagtcaagtttgaagaaatgcatctaggc
agacctcttgctcatcttgtagagcaatgtaggtgtcctgctggttacactggattgtcg
tgccagagctgtgctccaggatactacaggggaaagcatacagaactcagtgtaagagag
cttcatactctgatagcaccttgtgtgccatgtcagtgcaacaaccacagtgaaacctgt
gatcctgacactgggaagtgcttggactgcagagataacacagttggtgaccactgcagt
gcttgtgccccaggctactatgggaaagtgactggatctgccaatgactgctctccttgt
gcctgtcccagagccaaccctgccagttttagtcccacttgtgtcctgaaaggtgttcat
gattaccactgtgatgcctgtctcccaggatatgaaggacagtactgtgaaaggtgctcc
cctggctactacggtgcccctcggctccctggtggcagctgccgtccgtgccagtgcaat
ccgggcggttccattcacgggaattgcgatggtgccaccgggcagtgtctctgcaagcca
ggggtgacgggacagctctgcgaggagtgtgagcccaggcatcttctgctggaagacgag
tgtgtctcttgtgatgacaactgcacaggagttttgctaagcagtttggataatctcgat
gaggccatgctttcagtgaacctcactggtattgaccgtgtgccttatgggatattgtca
gagttggagaatgcaacagagcatctgaagaggtctatagttcctagagaagacccaact
tactcgttagatacaacaaaagaaaatcttctgaatttatcaggaggaattgattacttg
catgaagagacaaccagatttttgaaaaaagctcagcaacttgacacaatgactcagaaa
accaggaataaaagtcaagaactgactggctttattgacacagtgcatacaaccatcaaa
gtgcttgctgaagttgttttgtcactaaatgaaacactgggcctggatctgccgctgtca
aatgctgcatctcagagcctgcaggatgatatttctgcccttttggatgcattgcgcaag
aaggatttcgttcagcagcaccataatgctaccacagtcctaaaagctgcagaaaagttg
ttgacccaggttcagaaagagtatttcaaaccccagcaggaacttgctgaactaaaaagg
aatgccagccaattcttatcaaagcagagcagcagactgcaggatgcccaggacctggtg
aacgaggcactcgctaacatcaatgagacccgtcgcttgtttcctctcatctccagcaac
ctggcagagttaaatgacaaaaagctaaaaataaaggaaggtgaagaaatctcgaccatg
ctcattaaagaagggaaggtcctactgaatgatgctgctgctcttgcccaagatgtaaag
aactctacgtttaatgtggaagtccaccagaatgggttggtcctgtggagcaccaaactg
cgacatcacgtggatgagctggtgatgaagatgtctgtgagaggagtgcttgacttggta
tacagagctgaggaacatgccacccagttccaaagacttgcagatgcactagagagtgac
ctttccagagtaagaaatgtgactctgaacacaactgctgctatctacactcactccagc
gttcaaagtgtgattgaaagaacagaaagtttggcagatgatgcatctagagttgtgagt
gcgcccttggatttagtaaaggagtctttcagtcttctgggaaaagaaactctactactt
agctccaaatttcagaatgaagctacaaatctgaagaaaaaaagtgatggacttctattt
ggattgaatgggttgaacaaaaaggtagaaaagattcgggaaagtactaataaaattggc
aaccaacttaatgattctctgttgacactcagagcattgcataacaatgccaggaaacac
atgcttgaagtgaaagagctggctgtgtctgcaaacaccagtgctgtggtggatttaagt
cactttggggagttcagtcaaaagctaatgaatacatcttctacattgtcccaagttaat
gacactttgaggaaaacaagtgaactcataactgattcatcaaaagctgcatacacagct
gaaaaacaagttaaagaagttgaagcacaagcaagtcttttattggatagactcaaacct
ttgaaaatgctggaggagaacctgaacagaaacctgtctgaaattaaagaacttatcagc
caggcccgcaagcaggcagcatctattaaagttgcagtatcagcagacagagattgcatt
cgtgcctatcaaccccaaatttcatctacaaattacaacaccttaacactcaatgtgaaa
actgctgaaccagataacctccttttctacttgggtagcaatggtgcacagctgttagtt
ccttgtggcacactatcatgggatagtatttttcacagactagtaagcgtatgtgtgcat
gtgtgtgtatatatataaagagagggcaagtgcaatggctgttttggaagcccacaggat
gaggacacttcattccattttgatggcagtggatactcagtggtggagaaggcacttcgc
tcaacattgactcagatattaatatctttcagtaccttttcaccaaatgggcttcttctg
tatctttcttcaaatggcactagagacttcttatcccttgagcttgttgatggcaaagtg
agggtgactgttgatcttggttcaggaccccttgcccttacaacagaaaatcgttataac
aacggaacgtggtataaaatctcattcaatcggaacaagaagcaaggaattttgacagtc
atggatgcatataaccttaattataaagaaaccaagcaaggagaatctcctggagttgcc
tcagacctgaaccgctctgataaggacccaatcttcattggtgggctgccaagatcgagg
gctttgaggaaaggtcttaatagtagaatgtatgtgggatgcatcaagaatctggaaata
tctcgttccacctttgacttgcttagaaattcatatggagtaagaaaaggctgtgtattg
gagcctattcatagcgtgagcatcatgaacaatggatatattgagttggtacctaagtcc
ttaagcccagagtcagaactgatggcaacttttgctacaaagaacagcagtggcatcatc
cttgctggactcagcaggggactggaaaagcgacaacgaagacaagcacacttgcccttc
ttttccatcatgctgattgatggtcatcttgcagtgcatgttaatgctggagacagagca
agtactaggaaagtagttcttcagtctgctaatggaacatacagtgatggacaagaacac
tctgtcatcctaattcggaataagaggatcataactgtacaggtggatgaaagtaaacct
gcagaattgaggcttggttcagcagcagaaaatagccccattaatatttccaacttctat
gctggtggcattccagcaggagagggcattttagggctaaaattggctggctcctttcat
ggctgtatcagcaaccttatttttaacaaggagcttttatattttaccacttccatgaag
tatgagcatgtggatatggacagctgctttctgtcagagaagcctaaaacagctctacaa
ccatcagacattgtgattcaacctgaacttcaggctttaccagttcccctgagacctctc
acagacacaaaaaaagtagtttgtgcaaaagatgagctgcctggtcatgttcaaggtgct
catcagtttggacttgccaaaggcagccacttgaccctgctcttcaatcagtctgctgtc
aggaagaaactttccatccagctgaatctcagaaccttttcctccactggcctgatttac
tacatggctcaccaaaaccaggttgattatgcagccctacagctttatgggggacagctc
catttctcatttgatttaggcaaaggaaaagcagtagctcttcaccctgctgttgtcagt
gatggaaaatggcatacggtaaagacggaatatgttaaaagaaaaggcacaatcattgtg
gatggacaggaactggtagcagtcaatgctctgggagatggtagcaccttggatgtggag
gggaagctctatgtgggaggactccccttagactacgtaccaaagaatcttgggaatgtt
actcacagtattcctgcctgcattggtagcatgacaattaatggcaaacaactggacaac
gagagtcctgtctctatctttgctgtgaataaatgctatgaaacagtgcaggatggtact
ttctttgatggaagtggttttgctgctcttgtcagagaaggctacaaagtgcgctctgac
gtgaacatctccctggagttccgcacaacagcggtgcacggcgttctgctcggcgtcagc
agcgccaaggtggatgcgattgggctggaaattgtacatggcaaggttttattccatgtc
aacaatggagctggcagaataacagcttcctatgaaccaagaggcacaaatggcttgtgt
gatgggaaatggcacaagcttcaagcaaacaaaagcaaacatcacatttcactgataatt
gatgggaatttggttcacactgataatccctatgtccagtcaacatctgcagatacgaac
aatcccatttatgttggaggttatcctgctgatgtcaagcaaaactgcctcacaagcaag
agctcattccgtggctgtttgaggaaccttgttttgaccaagggccaacatacagaattg
tttgactttagcagagcttttgacctgcgtggagtatttcctcattcctgccctggggct
gagcactga
DBGET
integrated database retrieval system
