Pyrgilauda ruficollis (rufous-necked snowfinch): 121359010
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Entry
121359010 CDS
T07608
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121359010 (TRAPPC8)
Membrane trafficking [BR:
pruf04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
121359010 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
SNAP
Motif
Other DBs
NCBI-GeneID:
121359010
NCBI-ProteinID:
XP_041333578
LinkDB
All DBs
Position
Unknown
AA seq
1471 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPLVAALCSEEAERLTRRNNLSFAELVRPFCRLTSEVHMRDPNN
QLHIIKNLKIAVNNIITHPPQPGAIRKLLHDVVSVSQPAEGLVANVITAGDYDLNISDRS
VKASVPWYSNWKETLMELNTSTFYSATTPWFESYRECFLQSMPASDHEFLNHYVACMLVV
SSSEPDPVEQFLKLSQEQHRIQHSSEYSYPKWFIPNTLKYYVLLHDVSTGEEQRADSIYE
EMKQRYGTQGCYLLKINSRVSNRGADEQIPDPWSQYLQKNTIQNQDSYEDYTVVSNKNTD
HLISDGVESEIKDGLSNNFKTHPLQLDHPSGSLDSTDYMKASTSLQDSKKSNSGTPHGAC
LTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVP
EKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLNDQAMLYA
AGALEMAAVSAFLQPGAPRPYPAHYMETAIQTYRDICKNMVLAERCVLLSAEILKSQSKY
SEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRFSKAGQKKH
ALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILINDSKQPPAQQ
GAFLREYLYVYKNATQLSPDGPLPQLPLPYINSSATRVFFGHDRRPAEGEKQAATHVSLD
QEYDSESSQQWKELEEQVVSVINKGTIPSNFQPTQFCLNRYSDNSKFPLAVIEEPITVEV
SFRNPLKVPLLLTDLSLLWKFQPKDFSAKHDGETKEQGTCDEDMVGTEAIAEFLINSEET
KVARLKLFPHQTGELHILGVVYNLGSVQGAVSLDGLDPSIGLQTGKFVSNGLSVRGRQDL
EIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEIRKAYVEFV
NVSKCPLTALKVVSKHPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDPTSVRTALLSS
ASSADFGVGTGGSPEVIQVPLPDAVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESIKK
HSKMCHRVLRHTAVICTSRSLHIRATVCRSNALGDEEGRGDNMLLFVDVENINTSETGVK
EFHIVQVSSNSKHWKLQKSVNISGDKDTKLASRERAKLCFKAVRCKNSEENYTFADIVFG
NEQIISSASPCADFFFQSLSSEFKRTHVQSHTHASQRAVKQTFDETVRLIQRCSEVDLNI
VVLWKAYVVEDSKQLILEGQHHVALNTVGKEAFSFPQKQGFKKILGNSDWEDLEQELPET
VLLKFFRPENTPVPARPTPEQLSNLIKTSLHYPESFNHSFHQKSLCLVPVTLLLSNCSQA
VVDVMIDLRHKPASSEALEIHGSFTWLGQTQYKLQLKGQEVYSLQLKACFVHTGVYNLGT
PRVFAKLVDQVTLFETSQQNSMPALIIINNI
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagcggctcacccgcaggaacaacctcagcttcgcc
gagctcgtcaggcccttctgccgcctcacctcggaagttcacatgagagatcctaataat
cagcttcacatcatcaaaaatttgaagatcgctgtcaacaacatcattactcacccacct
cagcccggtgctattcggaaacttttgcatgatgttgtgtctgtcagtcagcctgctgaa
ggactggtagctaatgtgatcacagctggagattatgatctcaacatcagtgatcgctca
gttaaagctagtgttccttggtacagtaattggaaagagacactgatggaactgaacaca
tccacgttttattcagctactactccttggtttgagtcttacagagaatgctttcttcag
tccatgcctgcatctgatcacgaattcttaaaccactatgttgcatgtatgctggtagtt
tcttctagtgaacctgaccctgtggagcagttcctgaagctgtcccaagaacaacatcgg
attcagcacagtagtgaatactcatatcccaagtggtttataccaaacacactcaaatat
tatgtgttactgcatgatgtaagcacaggagaagaacaaagagctgactccatttatgaa
gagatgaaacagagatatggaactcagggttgctatttgctgaaaataaattctcgggtg
tctaacagaggagcagacgaacagataccagatccttggagtcagtaccttcagaaaaac
actatccagaaccaggattcttatgaagattatactgttgtttcaaacaagaatactgat
cacttgatatcagatggcgtagaaagtgaaattaaagatggcttgtcaaataactttaag
actcacccgcttcaactggatcatcccagtggcagtttggatagcactgattacatgaag
gcttctacatcacttcaagactcgaagaagtcaaattctgggacacctcatggtgcttgt
ttaactctgacagatcacgatcgaattaggcagttcatacaggaattcacatttcgggga
cttttgccacacatagagaaaacaattcgacagctcaatgatcagttaatatccaggaaa
ggcttgagccgatcactgttttctgctactaaaaaatggtttagtggcagcaaggttcca
gagaaaagcataaatgagctcaagaatacttctggtttgctgtatccaccagaggcgcca
gagcttcaaatccggaagatggcagacttgtgctttttggtgcagcactatgaacttgca
tatagctgttaccatacagcaaagaaggacttcttaaatgatcaggcaatgctttatgca
gctggagcactggaaatggcggcagtatcagcttttcttcagcctggagctcctaggccg
tatcctgctcattatatggagacagcaattcagacctatcgagatatctgcaagaacatg
gttctggctgaacgctgtgtactgcttagtgctgaaatcttaaaaagtcaaagcaaatat
tcagaggcagctgctcttctgattcgtttgaccagtgaggattcagatcttcgcagtgca
ctcctgttggagcaggcagcccattgttttataaacatgaaaagtcccatggttagaaag
tttgcatttcatatgatattggctggccacagatttagtaaagcaggccagaagaaacat
gccttacgttgctactgtcaagccatgcaggtgtacaaagggaagggctggtctcttgca
gaagaccacattaacttcaccatcggtcgtcagtcctttacgcttcgtcagctggacaac
gctgtgtctgccttcaggcatattttgatcaatgacagtaaacaacctccagcccagcaa
ggagcttttttaagagaatatctttatgtctataagaatgcaacccagctgtcacctgat
ggtcccttaccgcagcttcctttaccatatattaacagctcagcaactcgtgttttcttt
ggccatgatcgacgaccagcagaaggtgaaaagcaggcagctacgcacgtaagcctggat
caggagtatgactcagaatcatcacaacagtggaaggaactcgaggagcaggttgtgtct
gtgataaataaaggaacaataccttcaaactttcaaccaacgcaattctgtttaaatcgc
tactcagataactccaaatttccgcttgctgtcatagaagaaccgataactgtagaagtg
tccttccgaaatcctctgaaagttccgcttcttttgactgacctttcattgctgtggaag
tttcaacctaaagacttcagtgcaaagcatgatggagaaacaaaagagcagggtacatgt
gatgaagatatggtaggaactgaagcaatagcagaatttttaattaatagtgaggagaca
aaagtggcaagactaaagctctttccccatcaaacaggggagctacatattctgggagtc
gtttataatcttggcagtgttcaaggtgctgtgtcattagatgggctagatccttctatt
ggattacagacaggaaagtttgtttccaatgggttatctgtacgaggaagacaagattta
gaaatccaaggacctcgacttaataacacaaaagaggaaaaaacatcgattaaatatgga
cccgatcgacggttagatcccattattacagaagaaatgcctttgttagaggtgttcttt
ataaattttcctacaggacttctctgtggagaaatcagaaaagcgtatgtagaatttgtg
aacgtaagcaagtgtcctcttactgcactgaaggtcgtgtccaagcatccagaatttttc
acttttggtggaaatactgctgttttaacaccactaagtccttcagcctctgagaactgt
agtgcttacaagactgttgtgacagatcctacctctgtgcgaacagcactgctgtcttca
gcttcttctgcagactttggggttggcacgggaggttcacctgaagtaatacaggttccg
cttcctgatgctgttcttcttcctggggcttcagtgcagctgccaatgtggttacgggga
ccagatgaagaaggtgttcatgaaattaacttcttgttttactacgaaagtattaaaaag
cactcaaaaatgtgtcacagagtattaaggcacactgcagttatttgtaccagtcggtct
ctgcacattcgggctactgtctgcagaagtaatgcacttggggatgaagaaggcagaggg
gacaacatgttgctctttgtggatgtagaaaatatcaatactagtgagacgggtgttaag
gagtttcatatagtgcaagtttcaagcaacagcaagcactggaagcttcaaaaatctgtt
aacatctctggagacaaagatactaaactggctagcagagagagagcaaagttgtgtttt
aaagccgtgagatgcaaaaactcagaagaaaattacacatttgcagatattgtctttgga
aatgaacagataataagttcagcgagtccttgtgcagacttttttttccaaagcttatct
tctgaatttaaaagaacacatgtgcaatctcatactcatgcgtctcaaagggcagtgaaa
caaacatttgatgaaacagtcagattgatacaaagatgcagtgaagttgatttgaacatt
gtggtactgtggaaggcatatgttgtggaagacagcaagcagcttattttggagggccag
catcatgttgcccttaacacagttgggaaggaggccttttcatttcctcagaagcagggt
tttaaaaaaatactcgggaattctgattgggaggacttggaacaggaactaccagaaaca
gttctgttaaagttttttcgaccagaaaacacaccagtacctgcaagaccaacaccagag
cagctttctaaccttattaagacaagtcttcattatccagagtcttttaatcattctttt
catcaaaaaagcctctgcctggtacctgtcactctcctactttccaattgttcccaagct
gttgtagatgtgatgattgatttgcggcataaaccagcaagctctgaagcgctagaaata
catggatcttttacatggcttgggcaaacacagtacaagcttcagcttaaaggccaggag
gtctatagcttgcagctcaaggcttgcttcgttcatacaggtgtctataaccttggaacc
cccagagtatttgccaagctcgtggaccaagttactttgtttgaaacaagtcagcagaac
tccatgcctgcactgattattatcaataatatctga
DBGET
integrated database retrieval system
