Pyrgilauda ruficollis (rufous-necked snowfinch): 121359169
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Entry
121359169 CDS
T07608
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pruf03021
]
121359169 (TAF1B)
Transcription machinery [BR:
pruf03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
121359169 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF5816
DUF411
Motif
Other DBs
NCBI-GeneID:
121359169
NCBI-ProteinID:
XP_041333861
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MDEEDTRDFNERCAQCSEVNWGLTDGGRFYCRSCHNVTERTREVINTDFITNSRVQTISK
GLKKQEKTDGGCEWYICEGFQLVLKKQVEALEALGVCPQMKDEILCNFWRCYLQKSKQAY
CKRPAGETVRALSVCESSTDVDSDPERPSLLHLLSLSESEGDLQTDCSFASSVSKVSEST
SVYSGSVDGSLYLMKNQKEKLRMTMPMTLSFCYMALLWVREPITLSELLRFVVEGHIPYM
NVFQYFPEKMKLCGLDLKIFCVESWPVYEEVFNKMHELAAFLDLPRFPEITESCFLHPDM
LCMKYLMEANLPDELHNWTCRVVKKIGIGEVDFLTLVPGNKSTRKVKYDVLAAAVIVVVL
KLLFLLDDHYEWILSEFAEERNKNNTEGGPYFEFKKWYEVVKHSLDVEQKKLDEEKAKYL
WRCEKPLFYSVKNKSKALKRRQMVVNLQNQFGKLAGSVQRAEKPNPSSFQLSWSEENTDG
SCFHGHSLKGILQEKCGLLTAMNPDYWLCTVKLCNEKLCGHLAHYKEVEFPQSYHFVLGL
FSFLLRIQPSYIHDEVCMIEHKLFNKKLYKKLKYNTVLRK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacacgagagattttaatgagcgctgtgctcagtgttcagaagtgaac
tggggtctcactgatggaggcagattttattgtagatcttgccacaacgttactgagaga
actagagaagttataaacactgattttattactaattcaagagtccaaacaatctccaaa
ggtttaaaaaagcaggagaaaaccgatggaggctgtgaatggtatatttgtgaaggcttt
cagcttgtactcaagaaacaagtggaagctctagaagcattaggagtatgtccacaaatg
aaggatgaaattctgtgcaatttttggaggtgttaccttcagaagagcaaacaggcatat
tgcaagagaccagctggggaaactgtcagagcattatcagtatgtgagagcagtactgat
gtggacagtgatccggagagacccagccttctgcacttgctgtctctctctgaaagtgag
ggggatctgcagactgactgcagttttgcctcatcagtgagcaaggtctcagaaagcacc
tctgtgtactctggatcagtagatggcagcttgtatttaatgaagaaccaaaaggagaaa
ctgaggatgacgatgccaatgacactttcattttgttacatggcattactctgggtgaga
gaaccaattacattgtccgagctcttaaggtttgttgttgaagggcatattccatatatg
aatgttttccagtattttccggagaaaatgaagttgtgtggacttgatcttaagatcttt
tgtgtagagtcgtggcctgtatatgaagaagtattcaacaaaatgcatgagcttgcagca
tttttagacctgcctcgttttccagaaataacagaaagctgctttcttcatccagacatg
ctgtgcatgaagtacttgatggaagctaatttacctgatgaattgcataattggacttgt
cgagtggtgaaaaagattggtattggagaagtggatttcctgactctagtgcctggaaat
aagtcaacaagaaaagtgaaatatgatgttcttgctgcagcagttattgtagttgtgctc
aaattattgtttttattagatgatcactatgaatggatactttcagagtttgctgaagaa
agaaataaaaataacacagaagggggcccatattttgagttcaagaagtggtatgaggtg
gtaaaacattccttggatgtggagcaaaagaaactggatgaagaaaaagccaagtatctg
tggagatgtgaaaagccattgttttattcagtcaagaataaatctaaagctctaaagaga
agacaaatggttgtgaacttacaaaatcagtttggcaagctagctggttcagtgcaacgt
gctgaaaagccaaatccttcaagttttcagttaagttggtctgaagaaaacacagatggg
agttgttttcacgggcatagcctgaagggaattttgcaagaaaaatgtggtttactgaca
gccatgaaccctgactattggctgtgtacagttaaactatgtaatgagaaattgtgtggt
catctggctcattacaaagaagtggagtttccccagagttaccattttgtattagggttg
ttctcttttcttctgaggattcaaccctcttatatccatgatgaggtgtgtatgatagaa
cacaaactttttaataaaaaactctataaaaaactaaaatacaacacagtgctaaggaag
taa
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