Pyrgilauda ruficollis (rufous-necked snowfinch): 121359269
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Entry
121359269 CDS
T07608
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03082
ATP-dependent chromatin remodeling
pruf03083
Polycomb repressive complex
pruf04110
Cell cycle
pruf04330
Notch signaling pathway
pruf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121359269 (HDAC2)
03083 Polycomb repressive complex
121359269 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121359269 (HDAC2)
04350 TGF-beta signaling pathway
121359269 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121359269 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121359269 (HDAC2)
Enzymes [BR:
pruf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121359269 (HDAC2)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
121359269 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
121359269 (HDAC2)
BRAF-HDAC complex
121359269 (HDAC2)
REST complex
121359269 (HDAC2)
SHIP complex
121359269 (HDAC2)
MiDAC complex
121359269 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121359269 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121359269 (HDAC2)
Chromatin remodeling factors
NuRD complex
121359269 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
121359269
NCBI-ProteinID:
XP_041334029
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKAKDSSGEKTDAKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggcggcggcaagaagaaagtctgctattattacgacggtgatatt
ggaaactattactatggacaaggacatccaatgaaacctcacagaatccgaatgactcac
aacttgctgctaaactatggcttatatagaaaaatggaaatttatcgaccccacaaagca
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcaaatgcagagatttaatgttggagaagat
tgtcctgtatttgatggcctgtttgagttttgtcagctgtcaactggaggttctgttgct
ggggcagtaaaattgaacagacaacaaacagacatggctgtcaattgggctgggggactt
caccatgccaaaaaatcggaggcatctggtttctgttacgtcaatgatattgtgcttgcc
atccttgagttactgaagtatcaccaaagagtgctgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccaggcacaggggaccttagggacattggtgctggaaaaggc
aaatactatgctgtcaattttccaatgagggatggtatagatgatgaatcgtatggacag
atattcaaaccaattatatctaaagtaatggagatgtaccagcccagtgctgtggtattg
cagtgtggagcagattcactgtctggggacagactgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagttgtaaagacttttaacttgccactgctgatgttagga
ggaggaggctacacaattcgtaatgttgcgcgatgctggacatatgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccatacaatgactacttcgagtattttggacca
gacttcaagcttcatattagtccttcaaatatgactaatcagaatacaccagaatatatg
gagaagatcaagcaacgcttatttgagaacttacgcatgttacctcacgcacctggcgta
cagatgcaggccattcctgaggatgctgttcatgaagacagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgataagcgcatagcctgtgatgaagaa
ttttcagattctgaagatgaaggggaaggtggacgacgaaatgttgcagatcataagaaa
ggagcaaagaaagccagaatagaagaagacaaaaaagagactgaggacaaaaaagcagat
gttaaggaggaggataaagccaaggacagcagtggtgaaaagacagacgccaaaggagca
aaatcagaacagctcagcaacccttga
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