Pyrgilauda ruficollis (rufous-necked snowfinch): 121359276
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Entry
121359276 CDS
T07608
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121359276 (PRDM1)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121359276 (PRDM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
121359276
NCBI-ProteinID:
XP_041334052
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MRIKGCFLFFQAATQCSSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPLDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPPSRELTMMNLTQTHVNPKQHSADKDELYQKSI
PKKEHSVKEILKMESNPPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRP
HIPEDYLKASLAYGMDRPSYITHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGHLSPAFLPSYNPHYPKFLLPPFNMSCN
NLSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHMLNPTTLPSSLPSEGGRRLLQPDH
PRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGG
EEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKL
CPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGYCPVAPASGHSMEDL
NRINEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILTVLRREMEGANLKVSLQRNLGNG
LISSGCNLYESSDMSVMKLPHGHPLPLLPVKVKQETIEPMDP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttctttttttccaggctgctacacagtgtagctcggacgct
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacagaggctgattttgaagagaagtgcacatatattgtaaat
gatcatccgctggatcccagtgccgatggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatatgcatctaactgcaaagaggtcactggagtgataagc
aaagagtacatcccaaaaggaacacgctttggacccctggtaggagagatctataccagt
gatacggttcccaagaatgcaaacagaaaatacttttggcggatctattcaagcggtgaa
cttcaccacttcattgatggatttaacgaggacaagagcaactggatgcgttatgtaaac
cctggctactctgttcaggagcagaacttggctgcttgtcagaatggaatgaacatctac
ttctataccatcaagcccatccctgccaaccaagagctgcttgtgtggtactgccgagac
tttgcagagaggctgcactatcccccctccagagagctgacaatgatgaacctcacacaa
acccacgttaatccaaagcagcacagcgctgataaagatgagctttatcagaaaagcatc
ccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccaatcctcctaaggga
aaagacttctttcagaccaacatttcaccagttactccagaaaaagacttggatgattta
cgtaagaactatagcccagagaggtgtttcttccctcgagttgtctacccgatccgacct
cacattcctgaagactatctgaaagcttccttagcatatggcatggacagacccagttac
attactcactcgcccatccaggcatctactacaccaagtccttccgggaggagcagccca
gaccaaagtttaaaaagttcaagccctcacagtagtccgggggtcacagtttcgcctctg
gcacctacttcccaagagcacagagagccatactcttacttgaatggatcatatggctca
gaaggattggggtcttatcctggatatgcaccccctggccacctctcacctgcctttcta
ccatcctataacccccattaccccaaattcctgttacctccattcaatatgagctgtaat
aacctgagcgctttgaacaatatcaatggcatcaacaatttcaatctcttcccaaggatg
taccctctttacggcaacctgctcagtggaggtagcctttcccaccacatgctcaacccc
accacgctccccagctcattgcccagtgaaggaggccgtcgactgctgcagcctgatcat
ccgagagacttcctcataccagcacccaacagtgccttctctatcacgggcgctgctgcc
agcatgaaggacaagccatgcagccctaccagtgggtcccccaccgctggtacagcagcc
agttcggaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcggt
gaagaagccatgaatctcattaaaagtaagaggaatgtgactggttacaaaaccctccca
tacccactgaaaaagcagaatgggaagatcaagtacgaatgcaatgtttgctccaagacc
tttggccagctctccaatctgaaggtgcacctccgagtacacagtggagagagaccattt
aaatgccagacttgcaataagggcttcacgcagctggctcacctccagaagcactatctg
gtacacacgggagaaaagccccacgagtgtcaggtttgtcacaagcggttcagcagcacc
agcaatctcaaaacccacctgcggctccactctggagagaagccttaccagtgcaagctc
tgcccagccaaattcacccagtttgtgcacctgaagctgcacaaacgtctccacacccgg
gaacgcccccataaatgcatccactgccacaagagctacattcacctctgcagcctccag
gtccacctgaagggctactgtcccgtcgccccggcctccggccactccatggaggacctg
aaccggatcaacgaggagattgagaagttcgacatcagtgacaatgctgacaagctggaa
gaagtggaggacaatatcgacttaacatcgatcgtggagaaggatatactgaccgtgctc
aggagggaaatggaaggagctaacctgaaagtctctctgcagaggaacctgggaaatggg
cttatctcctcaggatgcaacctttacgagtcgtcagatatgtcagttatgaagttgcct
cacggtcacccactacctctgttacctgtaaaggtcaagcaagaaacaattgaaccaatg
gacccttaa
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