Pyrgilauda ruficollis (rufous-necked snowfinch): 121359302
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Entry
121359302 CDS
T07608
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121359302 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pruf03041
]
121359302 (CDC40)
Spliceosome [BR:
pruf03041
]
Complex C
Other components
Step II factors
121359302 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
121359302
NCBI-ProteinID:
XP_041334107
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MSAAIAALASYGGSDSEADSEPEAEGGSQGSAAVLASRDAVLHLRAPPAAPPALPVDAAP
EVAVKEDVETGVHLDPAIKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPA
HINDFMFEQQRRTFATYGYALDPSVDNPEAATKYIGSVEEAEKNQGLTVFETGQRKIEKR
KKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKLEDDKPGEEK
TILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFP
LSGHIMLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNNAGTQFLSAAYDRYLKL
WDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHL
GAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC
QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWK
TTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcgatcgccgcgctcgcctcctacggcggctccgactcggaggccgactcg
gagcccgaggccgagggcggctcccagggctccgccgccgtgctcgccagccgcgatgcc
gtgctgcacctccgggcaccgcccgccgcgcctccggccctgcccgtcgatgcggccccg
gaagtagccgtgaaggaagatgtggaaacaggagtccaccttgatcctgctatcaaggaa
gttcaatacaatcccacttatgaaactatgtttgcacctgagtttggaccagagaaccca
tttaggactcagcaaatggctgcacctagaaacatgctttctggatatgcagaaccagct
cacatcaatgatttcatgtttgaacaacagagaagaacatttgcaacctatggttatgca
ttagatccctctgtagataaccctgaagctgctaccaaatatattggttctgtggaagaa
gctgaaaaaaatcaaggtttaacagtgtttgaaacaggacagaggaaaattgaaaaaagg
aagaaattcaaggagaatgatgcgtctaatattgatggttttctgggaccatgggcaaag
tatgttgatgaaaaagaagtagccaaaccatcagaagaagagcagaaggagttggatgaa
ataacagctaagaggcagaagagaggaaaactagaagatgataaacctggagaggagaag
actatattacatgttaaagaaatgtatgactaccaggggagatcttatcttcatgtccct
caagatgttggggttaatctccgttctacagtaccacctgagaagtgctatcttccaaag
aaacaaatccatgtgtggtctgggcatacaaagggtgtcagtgcagtcagattgtttcct
ctgtctgggcatataatgttgtcttgctctatggattgcaaaattaagctatgggaagta
tatggtgatcgaagatgtctacgaacatttattgggcacagtaaagctgttcgagacatc
tgttttaacaatgcaggcactcagttccttagtgctgcatatgaccgctatctaaaactc
tgggacaccgaaacagggcaatgtatttcaagattcaccaacaggaaggttccttattgt
gtcaagttcaatcctgacgaagataaacaaaatctctttgttgcagggatgtcagataag
aaaattgtacagtgggatattcgaagtggtgagattgtgcaggaatacgataggcatttg
ggagctgtcaacaccattgtgtttgtggatgaaaatagaaggtttgtgagtacatctgat
gacaagagtttaagagtctgggaatgggacattcctgtagacttcaagtatatagctgag
ccaagtatgcattccatgccagccgtgactttgtctccaaatgggaaatggttggcttgc
cagtcaatggataaccaaatcttgatttttggagctcagaacagattcagattaaacaaa
aagaaaattttcaaaggtcacatggtagctggctatgcttgtcaagtggatttttcacct
gatatgagctatgtgatatctggagatgcagatgggaaactaaacatctgggactggaag
acaacaaaactctacagcaggttaaaagcacatgacaaagtctgtattggtgcagtgtgg
catccacacgaaacatccaaagtcatcacgtgcggctgggatggtctgattaaactatgg
gactaa
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integrated database retrieval system
